Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
PCDH17O14917 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC25.36■■□□□ 1.65
PCDH17O14917 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC25.36■■□□□ 1.65
PCDH17O14917 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
PCDH17O14917 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
PCDH17O14917 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC25.34■■□□□ 1.65
PCDH17O14917 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
PCDH17O14917 AC005559.1-201ENST00000589661 871 ntBASIC25.34■■□□□ 1.65
PCDH17O14917 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
PCDH17O14917 ABCB10P1-201ENST00000614297 2181 ntBASIC25.33■■□□□ 1.65
PCDH17O14917 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC25.33■■□□□ 1.64
PCDH17O14917 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
PCDH17O14917 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC25.32■■□□□ 1.64
PCDH17O14917 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
PCDH17O14917 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
PCDH17O14917 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC25.29■■□□□ 1.64
PCDH17O14917 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
PCDH17O14917 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC25.29■■□□□ 1.64
PCDH17O14917 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC25.28■■□□□ 1.64
PCDH17O14917 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
PCDH17O14917 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
PCDH17O14917 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC25.27■■□□□ 1.64
PCDH17O14917 DUX4L28-201ENST00000623687 678 ntBASIC25.27■■□□□ 1.64
PCDH17O14917 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
PCDH17O14917 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
PCDH17O14917 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC25.26■■□□□ 1.63
PCDH17O14917 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
PCDH17O14917 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
PCDH17O14917 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
PCDH17O14917 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC25.23■■□□□ 1.63
PCDH17O14917 AC087741.3-201ENST00000624270 1347 ntBASIC25.23■■□□□ 1.63
PCDH17O14917 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC25.23■■□□□ 1.63
PCDH17O14917 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
PCDH17O14917 AC044849.2-201ENST00000606596 710 ntBASIC25.23■■□□□ 1.63
PCDH17O14917 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC25.22■■□□□ 1.63
PCDH17O14917 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC25.22■■□□□ 1.63
PCDH17O14917 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
PCDH17O14917 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
PCDH17O14917 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
PCDH17O14917 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC25.21■■□□□ 1.63
PCDH17O14917 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC25.21■■□□□ 1.63
PCDH17O14917 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
PCDH17O14917 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC25.19■■□□□ 1.62
PCDH17O14917 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC25.19■■□□□ 1.62
PCDH17O14917 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
PCDH17O14917 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC25.18■■□□□ 1.62
PCDH17O14917 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
PCDH17O14917 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC25.17■■□□□ 1.62
PCDH17O14917 RPS2-209ENST00000529806 993 ntTSL 3 BASIC25.17■■□□□ 1.62
PCDH17O14917 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
PCDH17O14917 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
PCDH17O14917 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC25.16■■□□□ 1.62
PCDH17O14917 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
PCDH17O14917 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC25.15■■□□□ 1.62
PCDH17O14917 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
PCDH17O14917 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
PCDH17O14917 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
PCDH17O14917 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC25.12■■□□□ 1.61
PCDH17O14917 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC25.12■■□□□ 1.61
PCDH17O14917 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC25.12■■□□□ 1.61
PCDH17O14917 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC25.12■■□□□ 1.61
PCDH17O14917 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
PCDH17O14917 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC25.11■■□□□ 1.61
PCDH17O14917 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC25.11■■□□□ 1.61
PCDH17O14917 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
PCDH17O14917 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
PCDH17O14917 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
PCDH17O14917 ABCB10P3-201ENST00000561950 2166 ntBASIC25.1■■□□□ 1.61
PCDH17O14917 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
PCDH17O14917 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
PCDH17O14917 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC25.09■■□□□ 1.61
PCDH17O14917 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC25.09■■□□□ 1.61
PCDH17O14917 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC25.09■■□□□ 1.61
PCDH17O14917 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
PCDH17O14917 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC25.08■■□□□ 1.61
PCDH17O14917 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
PCDH17O14917 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC25.07■■□□□ 1.6
PCDH17O14917 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
PCDH17O14917 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC25.06■■□□□ 1.6
PCDH17O14917 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC25.06■■□□□ 1.6
PCDH17O14917 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
PCDH17O14917 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
PCDH17O14917 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC25.05■■□□□ 1.6
PCDH17O14917 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
PCDH17O14917 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
PCDH17O14917 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
PCDH17O14917 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
PCDH17O14917 MLEC-202ENST00000412616 841 ntTSL 3 BASIC25.04■■□□□ 1.6
PCDH17O14917 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
PCDH17O14917 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
PCDH17O14917 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC25.03■■□□□ 1.6
PCDH17O14917 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
PCDH17O14917 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
PCDH17O14917 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC25.02■■□□□ 1.6
PCDH17O14917 BOD1-206ENST00000480951 814 ntTSL 2 BASIC25.02■■□□□ 1.6
PCDH17O14917 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
PCDH17O14917 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC24.99■■□□□ 1.59
PCDH17O14917 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
PCDH17O14917 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
PCDH17O14917 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC24.98■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms