Protein–RNA interactions for Protein: B2RNG4

TRIM6-TRIM34, TRIM6-TRIM34 readthrough, humanhuman

Predictions only

Length 842 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-TRIM34B2RNG4 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
TRIM6-TRIM34B2RNG4 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC32.56■■■□□ 2.8
TRIM6-TRIM34B2RNG4 EBPL-202ENST00000378268 680 ntTSL 3 BASIC32.54■■■□□ 2.8
TRIM6-TRIM34B2RNG4 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
TRIM6-TRIM34B2RNG4 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
TRIM6-TRIM34B2RNG4 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC32.53■■■□□ 2.8
TRIM6-TRIM34B2RNG4 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC32.52■■■□□ 2.8
TRIM6-TRIM34B2RNG4 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
TRIM6-TRIM34B2RNG4 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
TRIM6-TRIM34B2RNG4 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC32.51■■■□□ 2.8
TRIM6-TRIM34B2RNG4 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
TRIM6-TRIM34B2RNG4 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC32.5■■■□□ 2.79
TRIM6-TRIM34B2RNG4 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
TRIM6-TRIM34B2RNG4 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
TRIM6-TRIM34B2RNG4 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC32.49■■■□□ 2.79
TRIM6-TRIM34B2RNG4 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC32.49■■■□□ 2.79
TRIM6-TRIM34B2RNG4 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC32.48■■■□□ 2.79
TRIM6-TRIM34B2RNG4 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
TRIM6-TRIM34B2RNG4 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC32.43■■■□□ 2.78
TRIM6-TRIM34B2RNG4 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC32.42■■■□□ 2.78
TRIM6-TRIM34B2RNG4 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
TRIM6-TRIM34B2RNG4 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
TRIM6-TRIM34B2RNG4 AL135925.1-201ENST00000605920 1701 ntBASIC32.4■■■□□ 2.78
TRIM6-TRIM34B2RNG4 ST7-AS1-201ENST00000456775 1889 ntBASIC32.4■■■□□ 2.78
TRIM6-TRIM34B2RNG4 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
TRIM6-TRIM34B2RNG4 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC32.4■■■□□ 2.78
TRIM6-TRIM34B2RNG4 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
TRIM6-TRIM34B2RNG4 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
TRIM6-TRIM34B2RNG4 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
TRIM6-TRIM34B2RNG4 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
TRIM6-TRIM34B2RNG4 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
TRIM6-TRIM34B2RNG4 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC32.39■■■□□ 2.78
TRIM6-TRIM34B2RNG4 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
TRIM6-TRIM34B2RNG4 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC32.39■■■□□ 2.78
TRIM6-TRIM34B2RNG4 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC32.38■■■□□ 2.77
TRIM6-TRIM34B2RNG4 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC32.38■■■□□ 2.77
TRIM6-TRIM34B2RNG4 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC32.38■■■□□ 2.77
TRIM6-TRIM34B2RNG4 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
TRIM6-TRIM34B2RNG4 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC32.37■■■□□ 2.77
TRIM6-TRIM34B2RNG4 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
TRIM6-TRIM34B2RNG4 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC32.36■■■□□ 2.77
TRIM6-TRIM34B2RNG4 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
TRIM6-TRIM34B2RNG4 DENR-202ENST00000455982 1052 ntTSL 5 BASIC32.35■■■□□ 2.77
TRIM6-TRIM34B2RNG4 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC32.35■■■□□ 2.77
TRIM6-TRIM34B2RNG4 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
TRIM6-TRIM34B2RNG4 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
TRIM6-TRIM34B2RNG4 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
TRIM6-TRIM34B2RNG4 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC32.32■■■□□ 2.76
TRIM6-TRIM34B2RNG4 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC32.32■■■□□ 2.76
TRIM6-TRIM34B2RNG4 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
TRIM6-TRIM34B2RNG4 SUZ12P1-203ENST00000578195 985 ntBASIC32.31■■■□□ 2.76
TRIM6-TRIM34B2RNG4 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC32.31■■■□□ 2.76
TRIM6-TRIM34B2RNG4 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
TRIM6-TRIM34B2RNG4 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC32.3■■■□□ 2.76
TRIM6-TRIM34B2RNG4 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC32.3■■■□□ 2.76
TRIM6-TRIM34B2RNG4 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
TRIM6-TRIM34B2RNG4 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
TRIM6-TRIM34B2RNG4 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC32.29■■■□□ 2.76
TRIM6-TRIM34B2RNG4 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
TRIM6-TRIM34B2RNG4 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC32.29■■■□□ 2.76
TRIM6-TRIM34B2RNG4 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC32.28■■■□□ 2.76
TRIM6-TRIM34B2RNG4 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC32.28■■■□□ 2.76
TRIM6-TRIM34B2RNG4 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
TRIM6-TRIM34B2RNG4 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC32.28■■■□□ 2.76
TRIM6-TRIM34B2RNG4 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC32.27■■■□□ 2.76
TRIM6-TRIM34B2RNG4 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
TRIM6-TRIM34B2RNG4 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC32.25■■■□□ 2.75
TRIM6-TRIM34B2RNG4 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
TRIM6-TRIM34B2RNG4 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
TRIM6-TRIM34B2RNG4 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC32.24■■■□□ 2.75
TRIM6-TRIM34B2RNG4 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC32.23■■■□□ 2.75
TRIM6-TRIM34B2RNG4 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC32.23■■■□□ 2.75
TRIM6-TRIM34B2RNG4 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
TRIM6-TRIM34B2RNG4 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC32.22■■■□□ 2.75
TRIM6-TRIM34B2RNG4 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
TRIM6-TRIM34B2RNG4 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
TRIM6-TRIM34B2RNG4 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC32.21■■■□□ 2.75
TRIM6-TRIM34B2RNG4 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC32.21■■■□□ 2.75
TRIM6-TRIM34B2RNG4 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC32.21■■■□□ 2.75
TRIM6-TRIM34B2RNG4 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC32.2■■■□□ 2.75
TRIM6-TRIM34B2RNG4 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC32.2■■■□□ 2.75
TRIM6-TRIM34B2RNG4 ABCB10P3-201ENST00000561950 2166 ntBASIC32.2■■■□□ 2.75
TRIM6-TRIM34B2RNG4 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.74
TRIM6-TRIM34B2RNG4 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC32.19■■■□□ 2.74
TRIM6-TRIM34B2RNG4 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC32.19■■■□□ 2.74
TRIM6-TRIM34B2RNG4 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC32.18■■■□□ 2.74
TRIM6-TRIM34B2RNG4 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
TRIM6-TRIM34B2RNG4 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC32.18■■■□□ 2.74
TRIM6-TRIM34B2RNG4 MIR762-201ENST00000390236 83 ntBASIC32.17■■■□□ 2.74
TRIM6-TRIM34B2RNG4 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC32.17■■■□□ 2.74
TRIM6-TRIM34B2RNG4 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
TRIM6-TRIM34B2RNG4 AC139426.1-201ENST00000568218 2529 ntBASIC32.15■■■□□ 2.74
TRIM6-TRIM34B2RNG4 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC32.15■■■□□ 2.74
TRIM6-TRIM34B2RNG4 AC010864.1-201ENST00000609407 1511 ntBASIC32.15■■■□□ 2.74
TRIM6-TRIM34B2RNG4 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC32.15■■■□□ 2.74
TRIM6-TRIM34B2RNG4 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
TRIM6-TRIM34B2RNG4 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
TRIM6-TRIM34B2RNG4 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
TRIM6-TRIM34B2RNG4 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC32.13■■■□□ 2.73
TRIM6-TRIM34B2RNG4 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC32.12■■■□□ 2.73
Retrieved 100 of 98,524 protein–RNA pairs in 8.9 ms