Protein–RNA interactions for Protein: A4FU49

SH3D21, SH3 domain-containing protein 21, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21A4FU49 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
SH3D21A4FU49 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
SH3D21A4FU49 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
SH3D21A4FU49 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
SH3D21A4FU49 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC24.56■■□□□ 1.52
SH3D21A4FU49 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
SH3D21A4FU49 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
SH3D21A4FU49 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
SH3D21A4FU49 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC24.55■■□□□ 1.52
SH3D21A4FU49 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC24.54■■□□□ 1.52
SH3D21A4FU49 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
SH3D21A4FU49 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC24.54■■□□□ 1.52
SH3D21A4FU49 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
SH3D21A4FU49 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
SH3D21A4FU49 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
SH3D21A4FU49 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC24.53■■□□□ 1.52
SH3D21A4FU49 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
SH3D21A4FU49 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC24.52■■□□□ 1.52
SH3D21A4FU49 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC24.51■■□□□ 1.51
SH3D21A4FU49 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
SH3D21A4FU49 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC24.51■■□□□ 1.51
SH3D21A4FU49 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
SH3D21A4FU49 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC24.5■■□□□ 1.51
SH3D21A4FU49 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
SH3D21A4FU49 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
SH3D21A4FU49 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
SH3D21A4FU49 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC24.47■■□□□ 1.51
SH3D21A4FU49 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC24.46■■□□□ 1.51
SH3D21A4FU49 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
SH3D21A4FU49 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
SH3D21A4FU49 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
SH3D21A4FU49 ST7-AS1-201ENST00000456775 1889 ntBASIC24.45■■□□□ 1.51
SH3D21A4FU49 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC24.45■■□□□ 1.5
SH3D21A4FU49 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC24.45■■□□□ 1.5
SH3D21A4FU49 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC24.45■■□□□ 1.5
SH3D21A4FU49 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC24.45■■□□□ 1.5
SH3D21A4FU49 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
SH3D21A4FU49 RPS2P35-201ENST00000443417 897 ntBASIC24.44■■□□□ 1.5
SH3D21A4FU49 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC24.44■■□□□ 1.5
SH3D21A4FU49 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
SH3D21A4FU49 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC24.43■■□□□ 1.5
SH3D21A4FU49 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
SH3D21A4FU49 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
SH3D21A4FU49 CAHM-201ENST00000604200 896 ntBASIC24.42■■□□□ 1.5
SH3D21A4FU49 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC24.41■■□□□ 1.5
SH3D21A4FU49 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SH3D21A4FU49 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC24.4■■□□□ 1.5
SH3D21A4FU49 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC24.39■■□□□ 1.5
SH3D21A4FU49 AL133380.1-201ENST00000506013 324 ntBASIC24.39■■□□□ 1.49
SH3D21A4FU49 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC24.39■■□□□ 1.49
SH3D21A4FU49 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SH3D21A4FU49 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SH3D21A4FU49 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SH3D21A4FU49 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
SH3D21A4FU49 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC24.36■■□□□ 1.49
SH3D21A4FU49 AL391121.1-201ENST00000607967 1349 ntBASIC24.35■■□□□ 1.49
SH3D21A4FU49 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC24.35■■□□□ 1.49
SH3D21A4FU49 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SH3D21A4FU49 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SH3D21A4FU49 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SH3D21A4FU49 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC24.33■■□□□ 1.49
SH3D21A4FU49 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
SH3D21A4FU49 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC24.33■■□□□ 1.49
SH3D21A4FU49 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
SH3D21A4FU49 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC24.33■■□□□ 1.48
SH3D21A4FU49 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
SH3D21A4FU49 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC24.31■■□□□ 1.48
SH3D21A4FU49 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
SH3D21A4FU49 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC24.31■■□□□ 1.48
SH3D21A4FU49 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC24.31■■□□□ 1.48
SH3D21A4FU49 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SH3D21A4FU49 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SH3D21A4FU49 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC24.3■■□□□ 1.48
SH3D21A4FU49 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC24.3■■□□□ 1.48
SH3D21A4FU49 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
SH3D21A4FU49 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
SH3D21A4FU49 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC24.27■■□□□ 1.48
SH3D21A4FU49 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC24.27■■□□□ 1.48
SH3D21A4FU49 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC24.27■■□□□ 1.48
SH3D21A4FU49 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC24.27■■□□□ 1.48
SH3D21A4FU49 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC24.26■■□□□ 1.47
SH3D21A4FU49 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC24.26■■□□□ 1.47
SH3D21A4FU49 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
SH3D21A4FU49 AP006261.1-201ENST00000584783 668 ntBASIC24.25■■□□□ 1.47
SH3D21A4FU49 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
SH3D21A4FU49 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
SH3D21A4FU49 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
SH3D21A4FU49 AL162393.1-201ENST00000437852 946 ntBASIC24.24■■□□□ 1.47
SH3D21A4FU49 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
SH3D21A4FU49 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
SH3D21A4FU49 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
SH3D21A4FU49 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC24.23■■□□□ 1.47
SH3D21A4FU49 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC24.23■■□□□ 1.47
SH3D21A4FU49 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
SH3D21A4FU49 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC24.22■■□□□ 1.47
SH3D21A4FU49 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
SH3D21A4FU49 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC24.21■■□□□ 1.47
SH3D21A4FU49 AC142086.6-201ENST00000621154 1765 ntBASIC24.21■■□□□ 1.47
SH3D21A4FU49 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC24.21■■□□□ 1.47
SH3D21A4FU49 EBPL-202ENST00000378268 680 ntTSL 3 BASIC24.21■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 414.2 ms