Protein–RNA interactions for Protein: A0A0J9YWB2

TRBV7-9, T-cell receptor beta variable 7-9 (Fragment), humanhuman

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV7-9A0A0J9YWB2 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRBV7-9A0A0J9YWB2 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRBV7-9A0A0J9YWB2 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TRBV7-9A0A0J9YWB2 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TRBV7-9A0A0J9YWB2 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
TRBV7-9A0A0J9YWB2 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC19.79■□□□□ 0.76
TRBV7-9A0A0J9YWB2 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRBV7-9A0A0J9YWB2 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRBV7-9A0A0J9YWB2 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRBV7-9A0A0J9YWB2 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
TRBV7-9A0A0J9YWB2 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRBV7-9A0A0J9YWB2 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC19.77■□□□□ 0.76
TRBV7-9A0A0J9YWB2 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRBV7-9A0A0J9YWB2 AL135925.1-201ENST00000605920 1701 ntBASIC19.77■□□□□ 0.76
TRBV7-9A0A0J9YWB2 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
TRBV7-9A0A0J9YWB2 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
TRBV7-9A0A0J9YWB2 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRBV7-9A0A0J9YWB2 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC19.76■□□□□ 0.75
TRBV7-9A0A0J9YWB2 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC19.76■□□□□ 0.75
TRBV7-9A0A0J9YWB2 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
TRBV7-9A0A0J9YWB2 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRBV7-9A0A0J9YWB2 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRBV7-9A0A0J9YWB2 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRBV7-9A0A0J9YWB2 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRBV7-9A0A0J9YWB2 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRBV7-9A0A0J9YWB2 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRBV7-9A0A0J9YWB2 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRBV7-9A0A0J9YWB2 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRBV7-9A0A0J9YWB2 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
TRBV7-9A0A0J9YWB2 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC19.73■□□□□ 0.75
TRBV7-9A0A0J9YWB2 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC19.73■□□□□ 0.75
TRBV7-9A0A0J9YWB2 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TRBV7-9A0A0J9YWB2 WASH5P-204ENST00000632292 975 ntBASIC19.73■□□□□ 0.75
TRBV7-9A0A0J9YWB2 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRBV7-9A0A0J9YWB2 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TRBV7-9A0A0J9YWB2 AC139426.1-201ENST00000568218 2529 ntBASIC19.72■□□□□ 0.75
TRBV7-9A0A0J9YWB2 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
TRBV7-9A0A0J9YWB2 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
TRBV7-9A0A0J9YWB2 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC19.72■□□□□ 0.75
TRBV7-9A0A0J9YWB2 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
TRBV7-9A0A0J9YWB2 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TRBV7-9A0A0J9YWB2 KLF16-203ENST00000592313 508 ntTSL 3 BASIC19.71■□□□□ 0.75
TRBV7-9A0A0J9YWB2 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRBV7-9A0A0J9YWB2 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC19.69■□□□□ 0.74
TRBV7-9A0A0J9YWB2 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRBV7-9A0A0J9YWB2 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRBV7-9A0A0J9YWB2 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRBV7-9A0A0J9YWB2 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC19.67■□□□□ 0.74
TRBV7-9A0A0J9YWB2 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRBV7-9A0A0J9YWB2 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TRBV7-9A0A0J9YWB2 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC19.67■□□□□ 0.74
TRBV7-9A0A0J9YWB2 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRBV7-9A0A0J9YWB2 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC19.66■□□□□ 0.74
TRBV7-9A0A0J9YWB2 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRBV7-9A0A0J9YWB2 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRBV7-9A0A0J9YWB2 AL133380.1-201ENST00000506013 324 ntBASIC19.65■□□□□ 0.74
TRBV7-9A0A0J9YWB2 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRBV7-9A0A0J9YWB2 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
TRBV7-9A0A0J9YWB2 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC19.64■□□□□ 0.73
TRBV7-9A0A0J9YWB2 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRBV7-9A0A0J9YWB2 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TRBV7-9A0A0J9YWB2 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRBV7-9A0A0J9YWB2 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC19.63■□□□□ 0.73
TRBV7-9A0A0J9YWB2 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TRBV7-9A0A0J9YWB2 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRBV7-9A0A0J9YWB2 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRBV7-9A0A0J9YWB2 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRBV7-9A0A0J9YWB2 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
TRBV7-9A0A0J9YWB2 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC19.6■□□□□ 0.73
TRBV7-9A0A0J9YWB2 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
TRBV7-9A0A0J9YWB2 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRBV7-9A0A0J9YWB2 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TRBV7-9A0A0J9YWB2 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRBV7-9A0A0J9YWB2 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TRBV7-9A0A0J9YWB2 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRBV7-9A0A0J9YWB2 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRBV7-9A0A0J9YWB2 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRBV7-9A0A0J9YWB2 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRBV7-9A0A0J9YWB2 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRBV7-9A0A0J9YWB2 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
TRBV7-9A0A0J9YWB2 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC19.53■□□□□ 0.72
TRBV7-9A0A0J9YWB2 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TRBV7-9A0A0J9YWB2 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRBV7-9A0A0J9YWB2 SHF-206ENST00000560471 2499 ntTSL 5 BASIC19.53■□□□□ 0.72
TRBV7-9A0A0J9YWB2 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRBV7-9A0A0J9YWB2 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRBV7-9A0A0J9YWB2 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.72
TRBV7-9A0A0J9YWB2 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
TRBV7-9A0A0J9YWB2 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRBV7-9A0A0J9YWB2 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
TRBV7-9A0A0J9YWB2 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC19.5■□□□□ 0.71
TRBV7-9A0A0J9YWB2 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRBV7-9A0A0J9YWB2 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRBV7-9A0A0J9YWB2 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRBV7-9A0A0J9YWB2 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC19.48■□□□□ 0.71
TRBV7-9A0A0J9YWB2 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRBV7-9A0A0J9YWB2 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRBV7-9A0A0J9YWB2 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
TRBV7-9A0A0J9YWB2 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
TRBV7-9A0A0J9YWB2 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms