Protein–RNA interactions for Protein: A0A0C4DH28

TRGV4, T-cell receptor gamma variable 4 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV4A0A0C4DH28 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
TRGV4A0A0C4DH28 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC18.95■□□□□ 0.62
TRGV4A0A0C4DH28 AC097358.2-201ENST00000607541 1159 ntBASIC18.94■□□□□ 0.62
TRGV4A0A0C4DH28 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
TRGV4A0A0C4DH28 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
TRGV4A0A0C4DH28 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRGV4A0A0C4DH28 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRGV4A0A0C4DH28 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
TRGV4A0A0C4DH28 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRGV4A0A0C4DH28 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
TRGV4A0A0C4DH28 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TRGV4A0A0C4DH28 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRGV4A0A0C4DH28 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRGV4A0A0C4DH28 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC18.92■□□□□ 0.62
TRGV4A0A0C4DH28 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRGV4A0A0C4DH28 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRGV4A0A0C4DH28 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
TRGV4A0A0C4DH28 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
TRGV4A0A0C4DH28 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
TRGV4A0A0C4DH28 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRGV4A0A0C4DH28 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
TRGV4A0A0C4DH28 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRGV4A0A0C4DH28 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRGV4A0A0C4DH28 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC18.88■□□□□ 0.61
TRGV4A0A0C4DH28 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRGV4A0A0C4DH28 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC18.88■□□□□ 0.61
TRGV4A0A0C4DH28 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRGV4A0A0C4DH28 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRGV4A0A0C4DH28 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRGV4A0A0C4DH28 ABCB10P1-201ENST00000614297 2181 ntBASIC18.86■□□□□ 0.61
TRGV4A0A0C4DH28 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
TRGV4A0A0C4DH28 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC18.86■□□□□ 0.61
TRGV4A0A0C4DH28 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRGV4A0A0C4DH28 EBPL-202ENST00000378268 680 ntTSL 3 BASIC18.86■□□□□ 0.61
TRGV4A0A0C4DH28 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRGV4A0A0C4DH28 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRGV4A0A0C4DH28 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRGV4A0A0C4DH28 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC18.85■□□□□ 0.61
TRGV4A0A0C4DH28 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC18.85■□□□□ 0.61
TRGV4A0A0C4DH28 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRGV4A0A0C4DH28 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC18.85■□□□□ 0.61
TRGV4A0A0C4DH28 AL391121.1-201ENST00000607967 1349 ntBASIC18.84■□□□□ 0.61
TRGV4A0A0C4DH28 AC136428.2-201ENST00000563187 214 ntBASIC18.84■□□□□ 0.61
TRGV4A0A0C4DH28 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRGV4A0A0C4DH28 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
TRGV4A0A0C4DH28 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRGV4A0A0C4DH28 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRGV4A0A0C4DH28 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRGV4A0A0C4DH28 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC18.81■□□□□ 0.6
TRGV4A0A0C4DH28 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRGV4A0A0C4DH28 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRGV4A0A0C4DH28 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC18.8■□□□□ 0.6
TRGV4A0A0C4DH28 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRGV4A0A0C4DH28 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC18.79■□□□□ 0.6
TRGV4A0A0C4DH28 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
TRGV4A0A0C4DH28 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
TRGV4A0A0C4DH28 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRGV4A0A0C4DH28 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRGV4A0A0C4DH28 CAHM-201ENST00000604200 896 ntBASIC18.78■□□□□ 0.6
TRGV4A0A0C4DH28 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRGV4A0A0C4DH28 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC18.78■□□□□ 0.6
TRGV4A0A0C4DH28 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRGV4A0A0C4DH28 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TRGV4A0A0C4DH28 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRGV4A0A0C4DH28 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRGV4A0A0C4DH28 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRGV4A0A0C4DH28 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
TRGV4A0A0C4DH28 AL135925.1-201ENST00000605920 1701 ntBASIC18.77■□□□□ 0.59
TRGV4A0A0C4DH28 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRGV4A0A0C4DH28 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC18.76■□□□□ 0.59
TRGV4A0A0C4DH28 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRGV4A0A0C4DH28 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TRGV4A0A0C4DH28 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRGV4A0A0C4DH28 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRGV4A0A0C4DH28 ST7-AS1-201ENST00000456775 1889 ntBASIC18.75■□□□□ 0.59
TRGV4A0A0C4DH28 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRGV4A0A0C4DH28 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRGV4A0A0C4DH28 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC18.74■□□□□ 0.59
TRGV4A0A0C4DH28 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TRGV4A0A0C4DH28 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRGV4A0A0C4DH28 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRGV4A0A0C4DH28 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRGV4A0A0C4DH28 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRGV4A0A0C4DH28 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRGV4A0A0C4DH28 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC18.73■□□□□ 0.59
TRGV4A0A0C4DH28 DENR-202ENST00000455982 1052 ntTSL 5 BASIC18.73■□□□□ 0.59
TRGV4A0A0C4DH28 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC18.73■□□□□ 0.59
TRGV4A0A0C4DH28 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC18.73■□□□□ 0.59
TRGV4A0A0C4DH28 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRGV4A0A0C4DH28 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TRGV4A0A0C4DH28 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRGV4A0A0C4DH28 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC18.72■□□□□ 0.59
TRGV4A0A0C4DH28 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC18.72■□□□□ 0.59
TRGV4A0A0C4DH28 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRGV4A0A0C4DH28 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRGV4A0A0C4DH28 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC18.71■□□□□ 0.59
TRGV4A0A0C4DH28 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
TRGV4A0A0C4DH28 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRGV4A0A0C4DH28 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRGV4A0A0C4DH28 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms