Protein–RNA interactions for Protein: S4R434

TMEM56-RWDD3, TMEM56-RWDD3 readthrough, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-RWDD3S4R434 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM56-RWDD3S4R434 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM56-RWDD3S4R434 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM56-RWDD3S4R434 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
TMEM56-RWDD3S4R434 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC17.28■□□□□ 0.36
TMEM56-RWDD3S4R434 OR2I1P-207ENST00000453522 948 ntBASIC17.28■□□□□ 0.36
TMEM56-RWDD3S4R434 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC17.28■□□□□ 0.36
TMEM56-RWDD3S4R434 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM56-RWDD3S4R434 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
TMEM56-RWDD3S4R434 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM56-RWDD3S4R434 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC17.28■□□□□ 0.36
TMEM56-RWDD3S4R434 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM56-RWDD3S4R434 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM56-RWDD3S4R434 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM56-RWDD3S4R434 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
TMEM56-RWDD3S4R434 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
TMEM56-RWDD3S4R434 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM56-RWDD3S4R434 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.27■□□□□ 0.36
TMEM56-RWDD3S4R434 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TMEM56-RWDD3S4R434 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC17.27■□□□□ 0.36
TMEM56-RWDD3S4R434 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC17.27■□□□□ 0.36
TMEM56-RWDD3S4R434 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TMEM56-RWDD3S4R434 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC17.27■□□□□ 0.36
TMEM56-RWDD3S4R434 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC17.27■□□□□ 0.36
TMEM56-RWDD3S4R434 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TMEM56-RWDD3S4R434 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC17.27■□□□□ 0.36
TMEM56-RWDD3S4R434 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TMEM56-RWDD3S4R434 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC17.27■□□□□ 0.36
TMEM56-RWDD3S4R434 AC006455.2-201ENST00000429931 906 ntBASIC17.27■□□□□ 0.36
TMEM56-RWDD3S4R434 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TMEM56-RWDD3S4R434 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC17.27■□□□□ 0.36
TMEM56-RWDD3S4R434 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TMEM56-RWDD3S4R434 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TMEM56-RWDD3S4R434 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
TMEM56-RWDD3S4R434 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
TMEM56-RWDD3S4R434 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
TMEM56-RWDD3S4R434 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC17.27■□□□□ 0.35
TMEM56-RWDD3S4R434 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC17.27■□□□□ 0.35
TMEM56-RWDD3S4R434 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TMEM56-RWDD3S4R434 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC17.27■□□□□ 0.35
TMEM56-RWDD3S4R434 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TMEM56-RWDD3S4R434 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TMEM56-RWDD3S4R434 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
TMEM56-RWDD3S4R434 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TMEM56-RWDD3S4R434 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TMEM56-RWDD3S4R434 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
TMEM56-RWDD3S4R434 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TMEM56-RWDD3S4R434 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TMEM56-RWDD3S4R434 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC17.26■□□□□ 0.35
TMEM56-RWDD3S4R434 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TMEM56-RWDD3S4R434 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
TMEM56-RWDD3S4R434 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
TMEM56-RWDD3S4R434 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC17.26■□□□□ 0.35
TMEM56-RWDD3S4R434 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TMEM56-RWDD3S4R434 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
TMEM56-RWDD3S4R434 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
TMEM56-RWDD3S4R434 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC17.25■□□□□ 0.35
TMEM56-RWDD3S4R434 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TMEM56-RWDD3S4R434 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TMEM56-RWDD3S4R434 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TMEM56-RWDD3S4R434 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TMEM56-RWDD3S4R434 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
TMEM56-RWDD3S4R434 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TMEM56-RWDD3S4R434 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC17.25■□□□□ 0.35
TMEM56-RWDD3S4R434 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC17.25■□□□□ 0.35
TMEM56-RWDD3S4R434 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
TMEM56-RWDD3S4R434 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC17.25■□□□□ 0.35
TMEM56-RWDD3S4R434 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TMEM56-RWDD3S4R434 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TMEM56-RWDD3S4R434 AC073314.1-201ENST00000568729 2216 ntBASIC17.25■□□□□ 0.35
TMEM56-RWDD3S4R434 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TMEM56-RWDD3S4R434 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TMEM56-RWDD3S4R434 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM56-RWDD3S4R434 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM56-RWDD3S4R434 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM56-RWDD3S4R434 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC17.24■□□□□ 0.35
TMEM56-RWDD3S4R434 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM56-RWDD3S4R434 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM56-RWDD3S4R434 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM56-RWDD3S4R434 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM56-RWDD3S4R434 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
TMEM56-RWDD3S4R434 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
TMEM56-RWDD3S4R434 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM56-RWDD3S4R434 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM56-RWDD3S4R434 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM56-RWDD3S4R434 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM56-RWDD3S4R434 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM56-RWDD3S4R434 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
TMEM56-RWDD3S4R434 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM56-RWDD3S4R434 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM56-RWDD3S4R434 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM56-RWDD3S4R434 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM56-RWDD3S4R434 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM56-RWDD3S4R434 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM56-RWDD3S4R434 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM56-RWDD3S4R434 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM56-RWDD3S4R434 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
TMEM56-RWDD3S4R434 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM56-RWDD3S4R434 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM56-RWDD3S4R434 PLK5-205ENST00000642079 1969 ntBASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms