RNA–Protein interactions for RNA: ENST00000511269.5

SPOCK3-217, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SPOCK3, Length 1,768 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK3-217ENST00000511269 NISCHQ9Y2I1 1504 aa45.21■■■■■ 4.83
SPOCK3-217ENST00000511269 CCDC180Q9P1Z9 1646 aa39.23■■■■□ 3.87
SPOCK3-217ENST00000511269 ZCCHC6Q5VYS8 1495 aaKnown RBP38.14■■■■□ 3.7
SPOCK3-217ENST00000511269 DCAF1Q9Y4B6 1507 aa37.49■■■■□ 3.59
SPOCK3-217ENST00000511269 SHROOM4Q9ULL8 1493 aa37.05■■■■□ 3.52
SPOCK3-217ENST00000511269 MYO15BQ96JP2 1530 aa36.84■■■■□ 3.49
SPOCK3-217ENST00000511269 DCAF8L2P0C7V8 631 aa36.81■■■■□ 3.48
SPOCK3-217ENST00000511269 ABCC9O60706 1549 aa36.37■■■■□ 3.41
SPOCK3-217ENST00000511269 NACADO15069 1562 aa36.35■■■■□ 3.41
SPOCK3-217ENST00000511269 SCRIBQ14160 1630 aa36.01■■■■□ 3.35
SPOCK3-217ENST00000511269 SUPT5HO00267 1087 aaKnown RBP35.91■■■■□ 3.34
SPOCK3-217ENST00000511269 RB1CC1Q8TDY2 1594 aa35.87■■■■□ 3.33
SPOCK3-217ENST00000511269 RSF1Q96T23 1441 aaPredicted RBP35.27■■■■□ 3.24
SPOCK3-217ENST00000511269 UNC13AQ9UPW8 1703 aa35.21■■■■□ 3.23
SPOCK3-217ENST00000511269 CECR2Q9BXF3 1484 aa35.03■■■■□ 3.2
SPOCK3-217ENST00000511269 MROH2BQ7Z745 1585 aa34.92■■■■□ 3.18
SPOCK3-217ENST00000511269 BAZ1AQ9NRL2 1556 aaPredicted RBP34.86■■■■□ 3.17
SPOCK3-217ENST00000511269 BICRAQ9NZM4 1560 aa34.83■■■■□ 3.17
SPOCK3-217ENST00000511269 CHIC1Q5VXU3 224 aa34.82■■■■□ 3.17
SPOCK3-217ENST00000511269 WIZO95785 1651 aa34.65■■■■□ 3.14
SPOCK3-217ENST00000511269 SMARCA4P51532 1647 aa34.64■■■■□ 3.14
SPOCK3-217ENST00000511269 TOP2AP11388 1531 aaKnown RBP34.37■■■■□ 3.09
SPOCK3-217ENST00000511269 PABPN1Q86U42 306 aaKnown RBP eCLIP34.34■■■■□ 3.09
SPOCK3-217ENST00000511269 PEG3Q9GZU2 1588 aa34.27■■■■□ 3.08
SPOCK3-217ENST00000511269 EIF4G1Q04637 1599 aaKnown RBP34.11■■■■□ 3.05
SPOCK3-217ENST00000511269 SMARCA2P51531 1590 aa34.06■■■■□ 3.04
SPOCK3-217ENST00000511269 CCDC88BA6NC98 1476 aa33.97■■■■□ 3.03
SPOCK3-217ENST00000511269 ATAD2BQ9ULI0 1458 aa33.9■■■■□ 3.02
SPOCK3-217ENST00000511269 TRIM41Q8WV44 630 aa33.77■■■■□ 3
SPOCK3-217ENST00000511269 BAZ1BQ9UIG0 1483 aaKnown RBP33.7■■■□□ 2.99
SPOCK3-217ENST00000511269 HMGXB3Q12766 1538 aa33.58■■■□□ 2.97
SPOCK3-217ENST00000511269 NCAPD3P42695 1498 aa33.54■■■□□ 2.96
SPOCK3-217ENST00000511269 LOC105371045A0A1W2PR82 267 aa33.4■■■□□ 2.94
SPOCK3-217ENST00000511269 ABCC8Q09428 1581 aa33.4■■■□□ 2.94
SPOCK3-217ENST00000511269 WRNQ14191 1432 aaPredicted RBP eCLIP33.15■■■□□ 2.9
SPOCK3-217ENST00000511269 FAM9AQ8IZU1 332 aaPredicted RBP33.08■■■□□ 2.89
SPOCK3-217ENST00000511269 EEA1Q15075 1411 aa33.05■■■□□ 2.88
SPOCK3-217ENST00000511269 SYNJ1O43426 1573 aa33.03■■■□□ 2.88
SPOCK3-217ENST00000511269 CC2D2AQ9P2K1 1620 aa33.01■■■□□ 2.87
SPOCK3-217ENST00000511269 CFTRP13569 1480 aa32.95■■■□□ 2.87
SPOCK3-217ENST00000511269 SOGA1O94964 1423 aa32.89■■■□□ 2.86
SPOCK3-217ENST00000511269 TOP2BQ02880 1626 aa32.89■■■□□ 2.86
SPOCK3-217ENST00000511269 PRDM2Q13029 1718 aa32.89■■■□□ 2.85
SPOCK3-217ENST00000511269 BIVM-ERCC5R4GMW8 1640 aa32.87■■■□□ 2.85
SPOCK3-217ENST00000511269 RUSC2Q8N2Y8 1516 aa32.74■■■□□ 2.83
SPOCK3-217ENST00000511269 CSRNP3Q8WYN3 585 aa32.68■■■□□ 2.82
SPOCK3-217ENST00000511269 CADPSQ9ULU8 1353 aa32.66■■■□□ 2.82
SPOCK3-217ENST00000511269 CUX1P39880 1505 aa32.63■■■□□ 2.81
SPOCK3-217ENST00000511269 KIF21BO75037 1637 aa32.61■■■□□ 2.81
SPOCK3-217ENST00000511269 TNIKQ9UKE5 1360 aa32.59■■■□□ 2.81
SPOCK3-217ENST00000511269 GOLGA3Q08378 1498 aa32.57■■■□□ 2.8
SPOCK3-217ENST00000511269 CEP164Q9UPV0 1460 aa32.52■■■□□ 2.8
SPOCK3-217ENST00000511269 EHMT2Q96KQ7 1210 aa32.49■■■□□ 2.79
SPOCK3-217ENST00000511269 PCGF6Q9BYE7 350 aa32.45■■■□□ 2.79
SPOCK3-217ENST00000511269 CEP162Q5TB80 1403 aa32.42■■■□□ 2.78
SPOCK3-217ENST00000511269 TRIM26Q12899 539 aaPredicted RBP32.42■■■□□ 2.78
SPOCK3-217ENST00000511269 LAMC3Q9Y6N6 1575 aa32.3■■■□□ 2.76
SPOCK3-217ENST00000511269 FANCD2Q9BXW9 1451 aa32.3■■■□□ 2.76
SPOCK3-217ENST00000511269 ERICH3Q5RHP9 1530 aa32.29■■■□□ 2.76
SPOCK3-217ENST00000511269 PRXQ9BXM0 1461 aa32.26■■■□□ 2.75
SPOCK3-217ENST00000511269 KIF27Q86VH2 1401 aa32.25■■■□□ 2.75
SPOCK3-217ENST00000511269 RAPGEF2Q9Y4G8 1499 aa32.22■■■□□ 2.75
SPOCK3-217ENST00000511269 UBTFP17480 764 aaKnown RBP32.21■■■□□ 2.75
SPOCK3-217ENST00000511269 DNMBPQ6XZF7 1577 aa32.17■■■□□ 2.74
SPOCK3-217ENST00000511269 NESP48681 1621 aa32.15■■■□□ 2.74
SPOCK3-217ENST00000511269 FGD5Q6ZNL6 1462 aa32.14■■■□□ 2.74
SPOCK3-217ENST00000511269 HRCP23327 699 aa32.12■■■□□ 2.73
SPOCK3-217ENST00000511269 TOPBP1Q92547 1522 aa32.05■■■□□ 2.72
SPOCK3-217ENST00000511269 CLIP1P30622 1438 aa32.03■■■□□ 2.72
SPOCK3-217ENST00000511269 CUX2O14529 1486 aa32.01■■■□□ 2.72
SPOCK3-217ENST00000511269 PDS5BQ9NTI5 1447 aa31.96■■■□□ 2.71
SPOCK3-217ENST00000511269 ABCA10Q8WWZ4 1543 aa31.93■■■□□ 2.7
SPOCK3-217ENST00000511269 POLA1P09884 1462 aaPredicted RBP31.93■■■□□ 2.7
SPOCK3-217ENST00000511269 IGF1RP08069 1367 aa31.92■■■□□ 2.7
SPOCK3-217ENST00000511269 URB2Q14146 1524 aaKnown RBP31.9■■■□□ 2.7
SPOCK3-217ENST00000511269 DNAJC5BQ9UF47 199 aa31.89■■■□□ 2.69
SPOCK3-217ENST00000511269 VPS8Q8N3P4 1428 aa31.87■■■□□ 2.69
SPOCK3-217ENST00000511269 WDR97A6NE52 1622 aa31.83■■■□□ 2.69
SPOCK3-217ENST00000511269 KIF21AQ7Z4S6 1674 aa31.83■■■□□ 2.69
SPOCK3-217ENST00000511269 RAD54L2Q9Y4B4 1467 aa31.77■■■□□ 2.68
SPOCK3-217ENST00000511269 CARMIL1Q5VZK9 1371 aa31.74■■■□□ 2.67
SPOCK3-217ENST00000511269 ARAP1Q96P48 1450 aa31.7■■■□□ 2.67
SPOCK3-217ENST00000511269 CUL7Q14999 1698 aa31.69■■■□□ 2.66
SPOCK3-217ENST00000511269 PPARGC1BQ86YN6 1023 aaKnown RBP31.68■■■□□ 2.66
SPOCK3-217ENST00000511269 ABCA5Q8WWZ7 1642 aa31.65■■■□□ 2.66
SPOCK3-217ENST00000511269 ARHGAP35Q9NRY4 1499 aa31.57■■■□□ 2.64
SPOCK3-217ENST00000511269 TARBP1Q13395 1621 aaKnown RBP31.57■■■□□ 2.64
SPOCK3-217ENST00000511269 MRC2Q9UBG0 1479 aa31.56■■■□□ 2.64
SPOCK3-217ENST00000511269 GAPVD1Q14C86 1478 aa31.46■■■□□ 2.63
SPOCK3-217ENST00000511269 ZEB1P37275 1124 aaPredicted RBP31.45■■■□□ 2.62
SPOCK3-217ENST00000511269 WDR62O43379 1518 aa31.42■■■□□ 2.62
SPOCK3-217ENST00000511269 CTTNBP2Q8WZ74 1663 aa31.41■■■□□ 2.62
SPOCK3-217ENST00000511269 RANGAP1P46060 587 aaPredicted RBP31.39■■■□□ 2.62
SPOCK3-217ENST00000511269 APLP2Q06481 763 aa31.38■■■□□ 2.61
SPOCK3-217ENST00000511269 TDRD9Q8NDG6 1382 aaKnown RBP31.37■■■□□ 2.61
SPOCK3-217ENST00000511269 EFCAB5A4FU69 1503 aa31.34■■■□□ 2.61
SPOCK3-217ENST00000511269 MAP3K1Q13233 1512 aa31.31■■■□□ 2.6
SPOCK3-217ENST00000511269 PBRM1Q86U86 1689 aa31.3■■■□□ 2.6
SPOCK3-217ENST00000511269 TTBK1Q5TCY1 1321 aaPredicted RBP31.28■■■□□ 2.6
SPOCK3-217ENST00000511269 IFT140Q96RY7 1462 aa31.27■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms