RNA–Protein interactions for RNA: ENST00000293349.10

PLEKHH3-201, Transcript of pleckstrin homology, MyTH4 and FERM domain containing H3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene PLEKHH3, Length 2,987 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLEKHH3-201ENST00000293349 NISCHQ9Y2I1 1504 aa40.72■■■■■ 4.11
PLEKHH3-201ENST00000293349 SHROOM4Q9ULL8 1493 aa35.96■■■■□ 3.35
PLEKHH3-201ENST00000293349 SUPT5HO00267 1087 aaKnown RBP35.37■■■■□ 3.25
PLEKHH3-201ENST00000293349 DCAF8L2P0C7V8 631 aa34.96■■■■□ 3.19
PLEKHH3-201ENST00000293349 ZCCHC6Q5VYS8 1495 aaKnown RBP34.39■■■■□ 3.1
PLEKHH3-201ENST00000293349 CCDC180Q9P1Z9 1646 aa34.03■■■■□ 3.04
PLEKHH3-201ENST00000293349 CHIC1Q5VXU3 224 aa34.02■■■■□ 3.04
PLEKHH3-201ENST00000293349 MYO15BQ96JP2 1530 aa33.97■■■■□ 3.03
PLEKHH3-201ENST00000293349 PCGF6Q9BYE7 350 aa33.61■■■□□ 2.97
PLEKHH3-201ENST00000293349 LOC105371045A0A1W2PR82 267 aa33.45■■■□□ 2.94
PLEKHH3-201ENST00000293349 HRCP23327 699 aa33.33■■■□□ 2.93
PLEKHH3-201ENST00000293349 PPARGC1BQ86YN6 1023 aaKnown RBP33.19■■■□□ 2.9
PLEKHH3-201ENST00000293349 EHMT2Q96KQ7 1210 aa32.99■■■□□ 2.87
PLEKHH3-201ENST00000293349 DCAF1Q9Y4B6 1507 aa32.9■■■□□ 2.86
PLEKHH3-201ENST00000293349 FAM9AQ8IZU1 332 aaPredicted RBP32.85■■■□□ 2.85
PLEKHH3-201ENST00000293349 SCRIBQ14160 1630 aa32.74■■■□□ 2.83
PLEKHH3-201ENST00000293349 TRIM41Q8WV44 630 aa32.6■■■□□ 2.81
PLEKHH3-201ENST00000293349 RSF1Q96T23 1441 aaPredicted RBP32.51■■■□□ 2.79
PLEKHH3-201ENST00000293349 ABCC9O60706 1549 aa32.48■■■□□ 2.79
PLEKHH3-201ENST00000293349 TRIM26Q12899 539 aaPredicted RBP32.44■■■□□ 2.78
PLEKHH3-201ENST00000293349 RB1CC1Q8TDY2 1594 aa32.29■■■□□ 2.76
PLEKHH3-201ENST00000293349 PELP1Q8IZL8 1130 aaKnown RBP32.22■■■□□ 2.75
PLEKHH3-201ENST00000293349 CECR2Q9BXF3 1484 aa32.14■■■□□ 2.74
PLEKHH3-201ENST00000293349 MROH2BQ7Z745 1585 aa31.9■■■□□ 2.7
PLEKHH3-201ENST00000293349 TTBK1Q5TCY1 1321 aaPredicted RBP31.89■■■□□ 2.7
PLEKHH3-201ENST00000293349 WIZO95785 1651 aa31.75■■■□□ 2.67
PLEKHH3-201ENST00000293349 SCAF1Q9H7N4 1312 aaKnown RBP31.62■■■□□ 2.65
PLEKHH3-201ENST00000293349 NACADO15069 1562 aa31.61■■■□□ 2.65
PLEKHH3-201ENST00000293349 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.58■■■□□ 2.65
PLEKHH3-201ENST00000293349 ZEB1P37275 1124 aaPredicted RBP31.58■■■□□ 2.65
PLEKHH3-201ENST00000293349 CCER1Q8TC90 406 aaPredicted RBP31.38■■■□□ 2.61
PLEKHH3-201ENST00000293349 ABCC8Q09428 1581 aa31.34■■■□□ 2.61
PLEKHH3-201ENST00000293349 PABPN1Q86U42 306 aaKnown RBP eCLIP31.32■■■□□ 2.6
PLEKHH3-201ENST00000293349 CCDC88BA6NC98 1476 aa31.22■■■□□ 2.59
PLEKHH3-201ENST00000293349 BAZ1AQ9NRL2 1556 aaPredicted RBP31.22■■■□□ 2.59
PLEKHH3-201ENST00000293349 UBTFP17480 764 aaKnown RBP31.17■■■□□ 2.58
PLEKHH3-201ENST00000293349 SOGA1O94964 1423 aa31.12■■■□□ 2.57
PLEKHH3-201ENST00000293349 RANGAP1P46060 587 aaPredicted RBP31.05■■■□□ 2.56
PLEKHH3-201ENST00000293349 RUSC2Q8N2Y8 1516 aa30.99■■■□□ 2.55
PLEKHH3-201ENST00000293349 EIF4G1Q04637 1599 aaKnown RBP30.98■■■□□ 2.55
PLEKHH3-201ENST00000293349 MYT1Q01538 1121 aa30.96■■■□□ 2.55
PLEKHH3-201ENST00000293349 CEP162Q5TB80 1403 aa30.95■■■□□ 2.55
PLEKHH3-201ENST00000293349 TOP2AP11388 1531 aaKnown RBP30.94■■■□□ 2.54
PLEKHH3-201ENST00000293349 SMARCA4P51532 1647 aa30.94■■■□□ 2.54
PLEKHH3-201ENST00000293349 CSRNP3Q8WYN3 585 aa30.9■■■□□ 2.54
PLEKHH3-201ENST00000293349 SMARCA2P51531 1590 aa30.89■■■□□ 2.54
PLEKHH3-201ENST00000293349 HNRNPUL2Q1KMD3 747 aaKnown RBP30.77■■■□□ 2.52
PLEKHH3-201ENST00000293349 DIEXFQ68CQ4 756 aaKnown RBP30.76■■■□□ 2.52
PLEKHH3-201ENST00000293349 UNC13AQ9UPW8 1703 aa30.75■■■□□ 2.51
PLEKHH3-201ENST00000293349 ACIN1Q9UKV3 1341 aaKnown RBP30.7■■■□□ 2.51
PLEKHH3-201ENST00000293349 NEUROD1Q13562 356 aa30.69■■■□□ 2.5
PLEKHH3-201ENST00000293349 TNIKQ9UKE5 1360 aa30.67■■■□□ 2.5
PLEKHH3-201ENST00000293349 WRNQ14191 1432 aaPredicted RBP eCLIP30.58■■■□□ 2.49
PLEKHH3-201ENST00000293349 GTF3C3Q9Y5Q9 886 aa30.57■■■□□ 2.48
PLEKHH3-201ENST00000293349 YTHDC1Q96MU7 727 aaKnown RBP30.55■■■□□ 2.48
PLEKHH3-201ENST00000293349 GOLGA3Q08378 1498 aa30.48■■■□□ 2.47
PLEKHH3-201ENST00000293349 BICRAQ9NZM4 1560 aa30.41■■■□□ 2.46
PLEKHH3-201ENST00000293349 APLP2Q06481 763 aa30.4■■■□□ 2.46
PLEKHH3-201ENST00000293349 EEA1Q15075 1411 aa30.39■■■□□ 2.45
PLEKHH3-201ENST00000293349 SYNJ1O43426 1573 aa30.37■■■□□ 2.45
PLEKHH3-201ENST00000293349 CLIP1P30622 1438 aa30.34■■■□□ 2.45
PLEKHH3-201ENST00000293349 ZNF316A6NFI3 1004 aaPredicted RBP30.32■■■□□ 2.44
PLEKHH3-201ENST00000293349 CENPBP07199 599 aaPredicted RBP30.3■■■□□ 2.44
PLEKHH3-201ENST00000293349 RAPGEF2Q9Y4G8 1499 aa30.25■■■□□ 2.43
PLEKHH3-201ENST00000293349 CEP164Q9UPV0 1460 aa30.24■■■□□ 2.43
PLEKHH3-201ENST00000293349 BAZ1BQ9UIG0 1483 aaKnown RBP30.23■■■□□ 2.43
PLEKHH3-201ENST00000293349 ATAD2BQ9ULI0 1458 aa30.21■■■□□ 2.43
PLEKHH3-201ENST00000293349 MIER1Q8N108 512 aa30.15■■■□□ 2.42
PLEKHH3-201ENST00000293349 VPS8Q8N3P4 1428 aa30.07■■■□□ 2.4
PLEKHH3-201ENST00000293349 ITGAEP38570 1179 aa30.05■■■□□ 2.4
PLEKHH3-201ENST00000293349 PEG3Q9GZU2 1588 aa29.98■■■□□ 2.39
PLEKHH3-201ENST00000293349 KANK4Q5T7N3 995 aaPredicted RBP29.98■■■□□ 2.39
PLEKHH3-201ENST00000293349 KIF21BO75037 1637 aa29.97■■■□□ 2.39
PLEKHH3-201ENST00000293349 TOP2BQ02880 1626 aa29.73■■■□□ 2.35
PLEKHH3-201ENST00000293349 ATP1B4Q9UN42 357 aaPredicted RBP29.69■■■□□ 2.34
PLEKHH3-201ENST00000293349 ARAP1Q96P48 1450 aa29.67■■■□□ 2.34
PLEKHH3-201ENST00000293349 DHX57Q6P158 1386 aaKnown RBP29.63■■■□□ 2.33
PLEKHH3-201ENST00000293349 P3H3Q8IVL6 736 aa29.63■■■□□ 2.33
PLEKHH3-201ENST00000293349 CUX1P39880 1505 aa29.61■■■□□ 2.33
PLEKHH3-201ENST00000293349 PRXQ9BXM0 1461 aa29.6■■■□□ 2.33
PLEKHH3-201ENST00000293349 KIF27Q86VH2 1401 aa29.56■■■□□ 2.32
PLEKHH3-201ENST00000293349 BIVM-ERCC5R4GMW8 1640 aa29.48■■■□□ 2.31
PLEKHH3-201ENST00000293349 FAM50AQ14320 339 aaKnown RBP29.44■■■□□ 2.3
PLEKHH3-201ENST00000293349 ERICH3Q5RHP9 1530 aa29.42■■■□□ 2.3
PLEKHH3-201ENST00000293349 ARHGAP35Q9NRY4 1499 aa29.41■■■□□ 2.3
PLEKHH3-201ENST00000293349 CCNB3Q8WWL7 1395 aa29.41■■■□□ 2.3
PLEKHH3-201ENST00000293349 CUX2O14529 1486 aa29.41■■■□□ 2.3
PLEKHH3-201ENST00000293349 NCAPD3P42695 1498 aa29.39■■■□□ 2.3
PLEKHH3-201ENST00000293349 KCNH8Q96L42 1107 aa29.36■■■□□ 2.29
PLEKHH3-201ENST00000293349 HIRIP3Q9BW71 556 aaPredicted RBP29.33■■■□□ 2.29
PLEKHH3-201ENST00000293349 SIN3AQ96ST3 1273 aa29.31■■■□□ 2.28
PLEKHH3-201ENST00000293349 CFTRP13569 1480 aa29.31■■■□□ 2.28
PLEKHH3-201ENST00000293349 IGF1RP08069 1367 aa29.29■■■□□ 2.28
PLEKHH3-201ENST00000293349 RAB3GAP2Q9H2M9 1393 aa29.28■■■□□ 2.28
PLEKHH3-201ENST00000293349 RRBP1Q9P2E9 1410 aaKnown RBP29.28■■■□□ 2.28
PLEKHH3-201ENST00000293349 CLSPNQ9HAW4 1339 aa29.25■■■□□ 2.27
PLEKHH3-201ENST00000293349 HMGXB3Q12766 1538 aa29.25■■■□□ 2.27
PLEKHH3-201ENST00000293349 BCL11AQ9H165 835 aa29.24■■■□□ 2.27
PLEKHH3-201ENST00000293349 CARMIL1Q5VZK9 1371 aa29.23■■■□□ 2.27
PLEKHH3-201ENST00000293349 DDX10Q13206 875 aaKnown RBP29.16■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms