RNA–Protein interactions for RNA: ENST00000574412.5

CXCL16-203, Transcript of C-X-C motif chemokine ligand 16, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CXCL16, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL16-203ENST00000574412 NISCHQ9Y2I1 1504 aa49.49■■■■■ 5.51
CXCL16-203ENST00000574412 CCDC180Q9P1Z9 1646 aa43.52■■■■■ 4.56
CXCL16-203ENST00000574412 ABCC9O60706 1549 aa41.82■■■■■ 4.28
CXCL16-203ENST00000574412 ZCCHC6Q5VYS8 1495 aaKnown RBP41.43■■■■■ 4.22
CXCL16-203ENST00000574412 DCAF8L2P0C7V8 631 aa41.17■■■■■ 4.18
CXCL16-203ENST00000574412 DCAF1Q9Y4B6 1507 aa40.86■■■■■ 4.13
CXCL16-203ENST00000574412 NACADO15069 1562 aa40.65■■■■■ 4.1
CXCL16-203ENST00000574412 MYO15BQ96JP2 1530 aa40.61■■■■■ 4.09
CXCL16-203ENST00000574412 RB1CC1Q8TDY2 1594 aa40.5■■■■■ 4.07
CXCL16-203ENST00000574412 SCRIBQ14160 1630 aa39.99■■■■□ 3.99
CXCL16-203ENST00000574412 SHROOM4Q9ULL8 1493 aa39.98■■■■□ 3.99
CXCL16-203ENST00000574412 UNC13AQ9UPW8 1703 aa39.77■■■■□ 3.96
CXCL16-203ENST00000574412 BICRAQ9NZM4 1560 aa39.31■■■■□ 3.88
CXCL16-203ENST00000574412 PABPN1Q86U42 306 aaKnown RBP eCLIP39.28■■■■□ 3.88
CXCL16-203ENST00000574412 CECR2Q9BXF3 1484 aa38.54■■■■□ 3.76
CXCL16-203ENST00000574412 BAZ1AQ9NRL2 1556 aaPredicted RBP38.27■■■■□ 3.72
CXCL16-203ENST00000574412 MROH2BQ7Z745 1585 aa38.24■■■■□ 3.71
CXCL16-203ENST00000574412 SMARCA4P51532 1647 aa38.24■■■■□ 3.71
CXCL16-203ENST00000574412 EIF4G1Q04637 1599 aaKnown RBP38.19■■■■□ 3.7
CXCL16-203ENST00000574412 RSF1Q96T23 1441 aaPredicted RBP38.11■■■■□ 3.69
CXCL16-203ENST00000574412 SUPT5HO00267 1087 aaKnown RBP38.08■■■■□ 3.69
CXCL16-203ENST00000574412 WIZO95785 1651 aa37.94■■■■□ 3.66
CXCL16-203ENST00000574412 CC2D2AQ9P2K1 1620 aa37.82■■■■□ 3.64
CXCL16-203ENST00000574412 ATAD2BQ9ULI0 1458 aa37.74■■■■□ 3.63
CXCL16-203ENST00000574412 PEG3Q9GZU2 1588 aa37.73■■■■□ 3.63
CXCL16-203ENST00000574412 SMARCA2P51531 1590 aa37.7■■■■□ 3.63
CXCL16-203ENST00000574412 BAZ1BQ9UIG0 1483 aaKnown RBP37.51■■■■□ 3.6
CXCL16-203ENST00000574412 NCAPD3P42695 1498 aa37.49■■■■□ 3.59
CXCL16-203ENST00000574412 DNAJC5BQ9UF47 199 aa37.47■■■■□ 3.59
CXCL16-203ENST00000574412 TOP2AP11388 1531 aaKnown RBP37.47■■■■□ 3.59
CXCL16-203ENST00000574412 HMGXB3Q12766 1538 aa37.41■■■■□ 3.58
CXCL16-203ENST00000574412 CCDC88BA6NC98 1476 aa37.06■■■■□ 3.52
CXCL16-203ENST00000574412 NESP48681 1621 aa36.5■■■■□ 3.43
CXCL16-203ENST00000574412 CADPSQ9ULU8 1353 aa36.49■■■■□ 3.43
CXCL16-203ENST00000574412 CFTRP13569 1480 aa36.49■■■■□ 3.43
CXCL16-203ENST00000574412 LAMC3Q9Y6N6 1575 aa36.38■■■■□ 3.41
CXCL16-203ENST00000574412 PRDM2Q13029 1718 aa36.37■■■■□ 3.41
CXCL16-203ENST00000574412 FANCD2Q9BXW9 1451 aa36.14■■■■□ 3.38
CXCL16-203ENST00000574412 ABCC8Q09428 1581 aa36.13■■■■□ 3.38
CXCL16-203ENST00000574412 KIF21AQ7Z4S6 1674 aa36.1■■■■□ 3.37
CXCL16-203ENST00000574412 PDS5BQ9NTI5 1447 aa36.09■■■■□ 3.37
CXCL16-203ENST00000574412 CHIC1Q5VXU3 224 aa36.02■■■■□ 3.36
CXCL16-203ENST00000574412 CEP164Q9UPV0 1460 aa35.99■■■■□ 3.35
CXCL16-203ENST00000574412 ERCC6Q03468 1493 aa35.92■■■■□ 3.34
CXCL16-203ENST00000574412 WRNQ14191 1432 aaPredicted RBP eCLIP35.91■■■■□ 3.34
CXCL16-203ENST00000574412 SYNJ1O43426 1573 aa35.84■■■■□ 3.33
CXCL16-203ENST00000574412 CUX1P39880 1505 aa35.81■■■■□ 3.32
CXCL16-203ENST00000574412 TRIM41Q8WV44 630 aa35.81■■■■□ 3.32
CXCL16-203ENST00000574412 URB2Q14146 1524 aaKnown RBP35.74■■■■□ 3.31
CXCL16-203ENST00000574412 TOP2BQ02880 1626 aa35.72■■■■□ 3.31
CXCL16-203ENST00000574412 BIVM-ERCC5R4GMW8 1640 aa35.71■■■■□ 3.31
CXCL16-203ENST00000574412 MRC2Q9UBG0 1479 aa35.7■■■■□ 3.31
CXCL16-203ENST00000574412 DNMBPQ6XZF7 1577 aa35.69■■■■□ 3.3
CXCL16-203ENST00000574412 TOPBP1Q92547 1522 aa35.67■■■■□ 3.3
CXCL16-203ENST00000574412 THOC2Q8NI27 1593 aaKnown RBP35.64■■■■□ 3.3
CXCL16-203ENST00000574412 WDR62O43379 1518 aa35.54■■■■□ 3.28
CXCL16-203ENST00000574412 FGD5Q6ZNL6 1462 aa35.52■■■■□ 3.28
CXCL16-203ENST00000574412 POLA1P09884 1462 aaPredicted RBP35.45■■■■□ 3.26
CXCL16-203ENST00000574412 RAD54L2Q9Y4B4 1467 aa35.35■■■■□ 3.25
CXCL16-203ENST00000574412 SOGA1O94964 1423 aa35.3■■■■□ 3.24
CXCL16-203ENST00000574412 CUX2O14529 1486 aa35.28■■■■□ 3.24
CXCL16-203ENST00000574412 TARBP1Q13395 1621 aaKnown RBP35.21■■■■□ 3.23
CXCL16-203ENST00000574412 FAM9AQ8IZU1 332 aaPredicted RBP35.21■■■■□ 3.23
CXCL16-203ENST00000574412 RUSC2Q8N2Y8 1516 aa35.19■■■■□ 3.22
CXCL16-203ENST00000574412 WDR97A6NE52 1622 aa35.18■■■■□ 3.22
CXCL16-203ENST00000574412 ABCA10Q8WWZ4 1543 aa35.14■■■■□ 3.22
CXCL16-203ENST00000574412 IFT140Q96RY7 1462 aa35.13■■■■□ 3.21
CXCL16-203ENST00000574412 TDRD9Q8NDG6 1382 aaKnown RBP35.05■■■■□ 3.2
CXCL16-203ENST00000574412 KIF27Q86VH2 1401 aa35.05■■■■□ 3.2
CXCL16-203ENST00000574412 ZNF608Q9ULD9 1512 aaPredicted RBP35.03■■■■□ 3.2
CXCL16-203ENST00000574412 ABCA5Q8WWZ7 1642 aa34.97■■■■□ 3.19
CXCL16-203ENST00000574412 EEA1Q15075 1411 aa34.96■■■■□ 3.19
CXCL16-203ENST00000574412 AQRO60306 1485 aaKnown RBP eCLIP34.95■■■■□ 3.18
CXCL16-203ENST00000574412 EIF4G3O43432 1585 aaKnown RBP34.92■■■■□ 3.18
CXCL16-203ENST00000574412 GAPVD1Q14C86 1478 aa34.91■■■■□ 3.18
CXCL16-203ENST00000574412 CSRNP3Q8WYN3 585 aa34.87■■■■□ 3.17
CXCL16-203ENST00000574412 PBRM1Q86U86 1689 aa34.86■■■■□ 3.17
CXCL16-203ENST00000574412 EHMT2Q96KQ7 1210 aa34.81■■■■□ 3.16
CXCL16-203ENST00000574412 IGF1RP08069 1367 aa34.79■■■■□ 3.16
CXCL16-203ENST00000574412 ERICH3Q5RHP9 1530 aa34.74■■■■□ 3.15
CXCL16-203ENST00000574412 GRIN2BQ13224 1484 aa34.73■■■■□ 3.15
CXCL16-203ENST00000574412 LOC105371045A0A1W2PR82 267 aa34.66■■■■□ 3.14
CXCL16-203ENST00000574412 CUL7Q14999 1698 aa34.65■■■■□ 3.14
CXCL16-203ENST00000574412 SNAPC4Q5SXM2 1469 aa34.63■■■■□ 3.13
CXCL16-203ENST00000574412 CARMIL1Q5VZK9 1371 aa34.63■■■■□ 3.13
CXCL16-203ENST00000574412 KIF21BO75037 1637 aa34.62■■■■□ 3.13
CXCL16-203ENST00000574412 PRXQ9BXM0 1461 aa34.62■■■■□ 3.13
CXCL16-203ENST00000574412 RAPGEF2Q9Y4G8 1499 aa34.58■■■■□ 3.13
CXCL16-203ENST00000574412 ADAMTS12P58397 1594 aa34.58■■■■□ 3.13
CXCL16-203ENST00000574412 GOLGA3Q08378 1498 aa34.51■■■■□ 3.12
CXCL16-203ENST00000574412 MAGI1Q96QZ7 1491 aaPredicted RBP34.51■■■■□ 3.12
CXCL16-203ENST00000574412 FHAD1B1AJZ9 1412 aa34.5■■■■□ 3.11
CXCL16-203ENST00000574412 UBTFP17480 764 aaKnown RBP34.42■■■■□ 3.1
CXCL16-203ENST00000574412 FBLN2P98095 1184 aa34.41■■■■□ 3.1
CXCL16-203ENST00000574412 SYNJ2O15056 1496 aa34.39■■■■□ 3.1
CXCL16-203ENST00000574412 CHMP7Q8WUX9 453 aaPredicted RBP34.35■■■■□ 3.09
CXCL16-203ENST00000574412 CHD1O14646 1710 aa34.34■■■■□ 3.09
CXCL16-203ENST00000574412 GRIN2AQ12879 1464 aa34.33■■■■□ 3.09
CXCL16-203ENST00000574412 CTTNBP2Q8WZ74 1663 aa34.23■■■■□ 3.07
CXCL16-203ENST00000574412 TNIKQ9UKE5 1360 aa34.22■■■■□ 3.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms