RNA–Protein interactions for RNA: ENST00000443345.2

PDCD2-203, Transcript of programmed cell death 2, humanhuman

TSL 1 (best) BASIC

Gene PDCD2, Length 1,897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-203ENST00000443345 NISCHQ9Y2I1 1504 aa48.62■■■■■ 5.37
PDCD2-203ENST00000443345 CCDC180Q9P1Z9 1646 aa42.53■■■■■ 4.4
PDCD2-203ENST00000443345 ZCCHC6Q5VYS8 1495 aaKnown RBP40.77■■■■■ 4.12
PDCD2-203ENST00000443345 ABCC9O60706 1549 aa40.52■■■■■ 4.08
PDCD2-203ENST00000443345 DCAF8L2P0C7V8 631 aa40.28■■■■■ 4.04
PDCD2-203ENST00000443345 DCAF1Q9Y4B6 1507 aa40.19■■■■■ 4.02
PDCD2-203ENST00000443345 MYO15BQ96JP2 1530 aa39.84■■■■□ 3.97
PDCD2-203ENST00000443345 NACADO15069 1562 aa39.69■■■■□ 3.95
PDCD2-203ENST00000443345 SHROOM4Q9ULL8 1493 aa39.44■■■■□ 3.9
PDCD2-203ENST00000443345 RB1CC1Q8TDY2 1594 aa39.43■■■■□ 3.9
PDCD2-203ENST00000443345 SCRIBQ14160 1630 aa39.08■■■■□ 3.85
PDCD2-203ENST00000443345 UNC13AQ9UPW8 1703 aa38.64■■■■□ 3.78
PDCD2-203ENST00000443345 BICRAQ9NZM4 1560 aa38.26■■■■□ 3.72
PDCD2-203ENST00000443345 PABPN1Q86U42 306 aaKnown RBP eCLIP38.16■■■■□ 3.7
PDCD2-203ENST00000443345 CECR2Q9BXF3 1484 aa37.82■■■■□ 3.64
PDCD2-203ENST00000443345 SUPT5HO00267 1087 aaKnown RBP37.79■■■■□ 3.64
PDCD2-203ENST00000443345 RSF1Q96T23 1441 aaPredicted RBP37.6■■■■□ 3.61
PDCD2-203ENST00000443345 BAZ1AQ9NRL2 1556 aaPredicted RBP37.56■■■■□ 3.6
PDCD2-203ENST00000443345 MROH2BQ7Z745 1585 aa37.55■■■■□ 3.6
PDCD2-203ENST00000443345 SMARCA4P51532 1647 aa37.44■■■■□ 3.58
PDCD2-203ENST00000443345 WIZO95785 1651 aa37.24■■■■□ 3.55
PDCD2-203ENST00000443345 EIF4G1Q04637 1599 aaKnown RBP37.13■■■■□ 3.53
PDCD2-203ENST00000443345 PEG3Q9GZU2 1588 aa36.99■■■■□ 3.51
PDCD2-203ENST00000443345 ATAD2BQ9ULI0 1458 aa36.91■■■■□ 3.5
PDCD2-203ENST00000443345 SMARCA2P51531 1590 aa36.87■■■■□ 3.49
PDCD2-203ENST00000443345 TOP2AP11388 1531 aaKnown RBP36.82■■■■□ 3.49
PDCD2-203ENST00000443345 BAZ1BQ9UIG0 1483 aaKnown RBP36.67■■■■□ 3.46
PDCD2-203ENST00000443345 CC2D2AQ9P2K1 1620 aa36.66■■■■□ 3.46
PDCD2-203ENST00000443345 NCAPD3P42695 1498 aa36.65■■■■□ 3.46
PDCD2-203ENST00000443345 HMGXB3Q12766 1538 aa36.56■■■■□ 3.44
PDCD2-203ENST00000443345 CCDC88BA6NC98 1476 aa36.46■■■■□ 3.43
PDCD2-203ENST00000443345 DNAJC5BQ9UF47 199 aa36.05■■■■□ 3.36
PDCD2-203ENST00000443345 CHIC1Q5VXU3 224 aa36.01■■■■□ 3.36
PDCD2-203ENST00000443345 CFTRP13569 1480 aa35.74■■■■□ 3.31
PDCD2-203ENST00000443345 CADPSQ9ULU8 1353 aa35.69■■■■□ 3.3
PDCD2-203ENST00000443345 ABCC8Q09428 1581 aa35.59■■■■□ 3.29
PDCD2-203ENST00000443345 TRIM41Q8WV44 630 aa35.56■■■■□ 3.28
PDCD2-203ENST00000443345 PRDM2Q13029 1718 aa35.53■■■■□ 3.28
PDCD2-203ENST00000443345 NESP48681 1621 aa35.49■■■■□ 3.27
PDCD2-203ENST00000443345 LAMC3Q9Y6N6 1575 aa35.45■■■■□ 3.26
PDCD2-203ENST00000443345 WRNQ14191 1432 aaPredicted RBP eCLIP35.39■■■■□ 3.26
PDCD2-203ENST00000443345 FANCD2Q9BXW9 1451 aa35.29■■■■□ 3.24
PDCD2-203ENST00000443345 SYNJ1O43426 1573 aa35.26■■■■□ 3.24
PDCD2-203ENST00000443345 PDS5BQ9NTI5 1447 aa35.19■■■■□ 3.22
PDCD2-203ENST00000443345 TOP2BQ02880 1626 aa35.14■■■■□ 3.22
PDCD2-203ENST00000443345 CUX1P39880 1505 aa35.13■■■■□ 3.22
PDCD2-203ENST00000443345 BIVM-ERCC5R4GMW8 1640 aa35.11■■■■□ 3.21
PDCD2-203ENST00000443345 CEP164Q9UPV0 1460 aa35.09■■■■□ 3.21
PDCD2-203ENST00000443345 KIF21AQ7Z4S6 1674 aa35.05■■■■□ 3.2
PDCD2-203ENST00000443345 DNMBPQ6XZF7 1577 aa34.91■■■■□ 3.18
PDCD2-203ENST00000443345 FAM9AQ8IZU1 332 aaPredicted RBP34.9■■■■□ 3.18
PDCD2-203ENST00000443345 URB2Q14146 1524 aaKnown RBP34.87■■■■□ 3.17
PDCD2-203ENST00000443345 TOPBP1Q92547 1522 aa34.87■■■■□ 3.17
PDCD2-203ENST00000443345 SOGA1O94964 1423 aa34.86■■■■□ 3.17
PDCD2-203ENST00000443345 FGD5Q6ZNL6 1462 aa34.8■■■■□ 3.16
PDCD2-203ENST00000443345 ERCC6Q03468 1493 aa34.76■■■■□ 3.16
PDCD2-203ENST00000443345 RUSC2Q8N2Y8 1516 aa34.75■■■■□ 3.15
PDCD2-203ENST00000443345 MRC2Q9UBG0 1479 aa34.74■■■■□ 3.15
PDCD2-203ENST00000443345 EEA1Q15075 1411 aa34.7■■■■□ 3.15
PDCD2-203ENST00000443345 POLA1P09884 1462 aaPredicted RBP34.68■■■■□ 3.14
PDCD2-203ENST00000443345 LOC105371045A0A1W2PR82 267 aa34.64■■■■□ 3.14
PDCD2-203ENST00000443345 WDR62O43379 1518 aa34.58■■■■□ 3.13
PDCD2-203ENST00000443345 CSRNP3Q8WYN3 585 aa34.57■■■■□ 3.12
PDCD2-203ENST00000443345 RAD54L2Q9Y4B4 1467 aa34.57■■■■□ 3.12
PDCD2-203ENST00000443345 THOC2Q8NI27 1593 aaKnown RBP34.55■■■■□ 3.12
PDCD2-203ENST00000443345 KIF27Q86VH2 1401 aa34.52■■■■□ 3.12
PDCD2-203ENST00000443345 CUX2O14529 1486 aa34.51■■■■□ 3.11
PDCD2-203ENST00000443345 ABCA10Q8WWZ4 1543 aa34.48■■■■□ 3.11
PDCD2-203ENST00000443345 EHMT2Q96KQ7 1210 aa34.42■■■■□ 3.1
PDCD2-203ENST00000443345 WDR97A6NE52 1622 aa34.4■■■■□ 3.1
PDCD2-203ENST00000443345 TARBP1Q13395 1621 aaKnown RBP34.38■■■■□ 3.09
PDCD2-203ENST00000443345 KIF21BO75037 1637 aa34.28■■■■□ 3.08
PDCD2-203ENST00000443345 IGF1RP08069 1367 aa34.27■■■■□ 3.08
PDCD2-203ENST00000443345 TDRD9Q8NDG6 1382 aaKnown RBP34.27■■■■□ 3.08
PDCD2-203ENST00000443345 IFT140Q96RY7 1462 aa34.27■■■■□ 3.08
PDCD2-203ENST00000443345 ABCA5Q8WWZ7 1642 aa34.22■■■■□ 3.07
PDCD2-203ENST00000443345 PRXQ9BXM0 1461 aa34.22■■■■□ 3.07
PDCD2-203ENST00000443345 GOLGA3Q08378 1498 aa34.21■■■■□ 3.07
PDCD2-203ENST00000443345 GAPVD1Q14C86 1478 aa34.18■■■■□ 3.06
PDCD2-203ENST00000443345 RAPGEF2Q9Y4G8 1499 aa34.16■■■■□ 3.06
PDCD2-203ENST00000443345 ZNF608Q9ULD9 1512 aaPredicted RBP34.11■■■■□ 3.05
PDCD2-203ENST00000443345 ERICH3Q5RHP9 1530 aa34.11■■■■□ 3.05
PDCD2-203ENST00000443345 AQRO60306 1485 aaKnown RBP eCLIP34.1■■■■□ 3.059e-7■■■■■ 36.8
PDCD2-203ENST00000443345 UBTFP17480 764 aaKnown RBP34.1■■■■□ 3.05
PDCD2-203ENST00000443345 CARMIL1Q5VZK9 1371 aa34.08■■■■□ 3.05
PDCD2-203ENST00000443345 TNIKQ9UKE5 1360 aa34.05■■■■□ 3.04
PDCD2-203ENST00000443345 CUL7Q14999 1698 aa34.01■■■■□ 3.04
PDCD2-203ENST00000443345 PBRM1Q86U86 1689 aa34■■■■□ 3.03
PDCD2-203ENST00000443345 EIF4G3O43432 1585 aaKnown RBP33.98■■■■□ 3.03
PDCD2-203ENST00000443345 GRIN2BQ13224 1484 aa33.95■■■■□ 3.03
PDCD2-203ENST00000443345 CEP162Q5TB80 1403 aa33.85■■■■□ 3.01
PDCD2-203ENST00000443345 FHAD1B1AJZ9 1412 aa33.8■■■■□ 3
PDCD2-203ENST00000443345 ADAMTS12P58397 1594 aa33.79■■■■□ 3
PDCD2-203ENST00000443345 SNAPC4Q5SXM2 1469 aa33.76■■■■□ 3
PDCD2-203ENST00000443345 MAGI1Q96QZ7 1491 aaPredicted RBP33.7■■■□□ 2.99
PDCD2-203ENST00000443345 CLIP1P30622 1438 aa33.66■■■□□ 2.98
PDCD2-203ENST00000443345 RANGAP1P46060 587 aaPredicted RBP33.65■■■□□ 2.98
PDCD2-203ENST00000443345 CTTNBP2Q8WZ74 1663 aa33.59■■■□□ 2.97
PDCD2-203ENST00000443345 SYNJ2O15056 1496 aa33.58■■■□□ 2.97
PDCD2-203ENST00000443345 GRIN2AQ12879 1464 aa33.54■■■□□ 2.96
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms