RNA–Protein interactions for RNA: ENST00000616600.4

HDGFL2-208, Transcript of HDGF like 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HDGFL2, Length 2,281 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL2-208ENST00000616600 NISCHQ9Y2I1 1504 aa43.36■■■■■ 4.53
HDGFL2-208ENST00000616600 CCDC180Q9P1Z9 1646 aa37.16■■■■□ 3.54
HDGFL2-208ENST00000616600 ZCCHC6Q5VYS8 1495 aaKnown RBP36.61■■■■□ 3.45
HDGFL2-208ENST00000616600 SHROOM4Q9ULL8 1493 aa36.33■■■■□ 3.41
HDGFL2-208ENST00000616600 DCAF8L2P0C7V8 631 aa35.76■■■■□ 3.31
HDGFL2-208ENST00000616600 DCAF1Q9Y4B6 1507 aa35.73■■■■□ 3.31
HDGFL2-208ENST00000616600 SUPT5HO00267 1087 aaKnown RBP35.45■■■■□ 3.27
HDGFL2-208ENST00000616600 MYO15BQ96JP2 1530 aa34.9■■■■□ 3.18
HDGFL2-208ENST00000616600 ABCC9O60706 1549 aa34.55■■■■□ 3.12
HDGFL2-208ENST00000616600 SCRIBQ14160 1630 aa34.54■■■■□ 3.12
HDGFL2-208ENST00000616600 NACADO15069 1562 aa34.44■■■■□ 3.1
HDGFL2-208ENST00000616600 CHIC1Q5VXU3 224 aa34.41■■■■□ 3.1
HDGFL2-208ENST00000616600 RSF1Q96T23 1441 aaPredicted RBP34.11■■■■□ 3.05
HDGFL2-208ENST00000616600 RB1CC1Q8TDY2 1594 aa33.92■■■■□ 3.02
HDGFL2-208ENST00000616600 HRCP23327 699 aa33.8■■■■□ 3
HDGFL2-208ENST00000616600 CECR2Q9BXF3 1484 aa33.76■■■□□ 2.99
HDGFL2-208ENST00000616600 MROH2BQ7Z745 1585 aa33.62■■■□□ 2.97
HDGFL2-208ENST00000616600 WIZO95785 1651 aa33.39■■■□□ 2.94
HDGFL2-208ENST00000616600 UNC13AQ9UPW8 1703 aa33.35■■■□□ 2.93
HDGFL2-208ENST00000616600 BAZ1AQ9NRL2 1556 aaPredicted RBP33.35■■■□□ 2.93
HDGFL2-208ENST00000616600 LOC105371045A0A1W2PR82 267 aa33.25■■■□□ 2.91
HDGFL2-208ENST00000616600 TRIM41Q8WV44 630 aa33.16■■■□□ 2.9
HDGFL2-208ENST00000616600 SMARCA4P51532 1647 aa33.1■■■□□ 2.89
HDGFL2-208ENST00000616600 PELP1Q8IZL8 1130 aaKnown RBP33.05■■■□□ 2.88
HDGFL2-208ENST00000616600 BICRAQ9NZM4 1560 aa33.01■■■□□ 2.87
HDGFL2-208ENST00000616600 TOP2AP11388 1531 aaKnown RBP32.95■■■□□ 2.87
HDGFL2-208ENST00000616600 PABPN1Q86U42 306 aaKnown RBP eCLIP32.9■■■□□ 2.863e-6■■□□□ 13.3
HDGFL2-208ENST00000616600 EIF4G1Q04637 1599 aaKnown RBP32.85■■■□□ 2.85
HDGFL2-208ENST00000616600 PPARGC1BQ86YN6 1023 aaKnown RBP32.81■■■□□ 2.84
HDGFL2-208ENST00000616600 PCGF6Q9BYE7 350 aa32.79■■■□□ 2.84
HDGFL2-208ENST00000616600 CCDC88BA6NC98 1476 aa32.76■■■□□ 2.83
HDGFL2-208ENST00000616600 SMARCA2P51531 1590 aa32.73■■■□□ 2.83
HDGFL2-208ENST00000616600 FAM9AQ8IZU1 332 aaPredicted RBP32.72■■■□□ 2.83
HDGFL2-208ENST00000616600 PEG3Q9GZU2 1588 aa32.59■■■□□ 2.81
HDGFL2-208ENST00000616600 ABCC8Q09428 1581 aa32.43■■■□□ 2.78
HDGFL2-208ENST00000616600 TRIM26Q12899 539 aaPredicted RBP32.37■■■□□ 2.77
HDGFL2-208ENST00000616600 ATAD2BQ9ULI0 1458 aa32.36■■■□□ 2.77
HDGFL2-208ENST00000616600 EHMT2Q96KQ7 1210 aa32.31■■■□□ 2.76
HDGFL2-208ENST00000616600 BAZ1BQ9UIG0 1483 aaKnown RBP32.21■■■□□ 2.75
HDGFL2-208ENST00000616600 SOGA1O94964 1423 aa32.07■■■□□ 2.72
HDGFL2-208ENST00000616600 WRNQ14191 1432 aaPredicted RBP eCLIP32.04■■■□□ 2.72
HDGFL2-208ENST00000616600 EEA1Q15075 1411 aa31.99■■■□□ 2.71
HDGFL2-208ENST00000616600 SCAF1Q9H7N4 1312 aaKnown RBP31.98■■■□□ 2.71
HDGFL2-208ENST00000616600 RUSC2Q8N2Y8 1516 aa31.92■■■□□ 2.7
HDGFL2-208ENST00000616600 CSRNP3Q8WYN3 585 aa31.89■■■□□ 2.7
HDGFL2-208ENST00000616600 MYT1Q01538 1121 aa31.89■■■□□ 2.7
HDGFL2-208ENST00000616600 NCAPD3P42695 1498 aa31.87■■■□□ 2.69
HDGFL2-208ENST00000616600 SYNJ1O43426 1573 aa31.87■■■□□ 2.69
HDGFL2-208ENST00000616600 HMGXB3Q12766 1538 aa31.83■■■□□ 2.69
HDGFL2-208ENST00000616600 ZEB1P37275 1124 aaPredicted RBP31.81■■■□□ 2.68
HDGFL2-208ENST00000616600 TNIKQ9UKE5 1360 aa31.8■■■□□ 2.68
HDGFL2-208ENST00000616600 CEP162Q5TB80 1403 aa31.73■■■□□ 2.67
HDGFL2-208ENST00000616600 GOLGA3Q08378 1498 aa31.67■■■□□ 2.66
HDGFL2-208ENST00000616600 UBTFP17480 764 aaKnown RBP31.61■■■□□ 2.65
HDGFL2-208ENST00000616600 TOP2BQ02880 1626 aa31.59■■■□□ 2.65
HDGFL2-208ENST00000616600 CEP164Q9UPV0 1460 aa31.55■■■□□ 2.64
HDGFL2-208ENST00000616600 KIF21BO75037 1637 aa31.54■■■□□ 2.64
HDGFL2-208ENST00000616600 BIVM-ERCC5R4GMW8 1640 aa31.5■■■□□ 2.63
HDGFL2-208ENST00000616600 CFTRP13569 1480 aa31.46■■■□□ 2.63
HDGFL2-208ENST00000616600 CUX1P39880 1505 aa31.34■■■□□ 2.61
HDGFL2-208ENST00000616600 RAPGEF2Q9Y4G8 1499 aa31.33■■■□□ 2.61
HDGFL2-208ENST00000616600 CLIP1P30622 1438 aa31.25■■■□□ 2.59
HDGFL2-208ENST00000616600 ACIN1Q9UKV3 1341 aaKnown RBP31.21■■■□□ 2.59
HDGFL2-208ENST00000616600 CC2D2AQ9P2K1 1620 aa31.2■■■□□ 2.58
HDGFL2-208ENST00000616600 PRDM2Q13029 1718 aa31.19■■■□□ 2.58
HDGFL2-208ENST00000616600 TTBK1Q5TCY1 1321 aaPredicted RBP31.18■■■□□ 2.58
HDGFL2-208ENST00000616600 CADPSQ9ULU8 1353 aa31.18■■■□□ 2.58
HDGFL2-208ENST00000616600 PRXQ9BXM0 1461 aa31.17■■■□□ 2.58
HDGFL2-208ENST00000616600 ERICH3Q5RHP9 1530 aa31.14■■■□□ 2.57
HDGFL2-208ENST00000616600 KIF27Q86VH2 1401 aa31.1■■■□□ 2.57
HDGFL2-208ENST00000616600 VPS8Q8N3P4 1428 aa31.09■■■□□ 2.57
HDGFL2-208ENST00000616600 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.05■■■□□ 2.56
HDGFL2-208ENST00000616600 NEUROD1Q13562 356 aa31.02■■■□□ 2.56
HDGFL2-208ENST00000616600 CCER1Q8TC90 406 aaPredicted RBP30.96■■■□□ 2.55
HDGFL2-208ENST00000616600 RANGAP1P46060 587 aaPredicted RBP30.93■■■□□ 2.54
HDGFL2-208ENST00000616600 GTF3C3Q9Y5Q9 886 aa30.85■■■□□ 2.53
HDGFL2-208ENST00000616600 CUX2O14529 1486 aa30.85■■■□□ 2.53
HDGFL2-208ENST00000616600 FGD5Q6ZNL6 1462 aa30.84■■■□□ 2.53
HDGFL2-208ENST00000616600 APLP2Q06481 763 aa30.84■■■□□ 2.53
HDGFL2-208ENST00000616600 FANCD2Q9BXW9 1451 aa30.83■■■□□ 2.53
HDGFL2-208ENST00000616600 ARAP1Q96P48 1450 aa30.82■■■□□ 2.52
HDGFL2-208ENST00000616600 IGF1RP08069 1367 aa30.81■■■□□ 2.52
HDGFL2-208ENST00000616600 CENPBP07199 599 aaPredicted RBP30.78■■■□□ 2.52
HDGFL2-208ENST00000616600 NESP48681 1621 aa30.68■■■□□ 2.5
HDGFL2-208ENST00000616600 DNMBPQ6XZF7 1577 aa30.66■■■□□ 2.5
HDGFL2-208ENST00000616600 CARMIL1Q5VZK9 1371 aa30.65■■■□□ 2.5
HDGFL2-208ENST00000616600 ARHGAP35Q9NRY4 1499 aa30.65■■■□□ 2.5
HDGFL2-208ENST00000616600 TOPBP1Q92547 1522 aa30.6■■■□□ 2.49
HDGFL2-208ENST00000616600 HNRNPUL2Q1KMD3 747 aaKnown RBP30.59■■■□□ 2.49
HDGFL2-208ENST00000616600 LAMC3Q9Y6N6 1575 aa30.56■■■□□ 2.48
HDGFL2-208ENST00000616600 POLA1P09884 1462 aaPredicted RBP30.55■■■□□ 2.48
HDGFL2-208ENST00000616600 ABCA10Q8WWZ4 1543 aa30.54■■■□□ 2.48
HDGFL2-208ENST00000616600 RAD54L2Q9Y4B4 1467 aa30.54■■■□□ 2.48
HDGFL2-208ENST00000616600 KANK4Q5T7N3 995 aaPredicted RBP30.52■■■□□ 2.48
HDGFL2-208ENST00000616600 DIEXFQ68CQ4 756 aaKnown RBP30.51■■■□□ 2.47
HDGFL2-208ENST00000616600 URB2Q14146 1524 aaKnown RBP30.41■■■□□ 2.46
HDGFL2-208ENST00000616600 DNAJC5BQ9UF47 199 aa30.41■■■□□ 2.46
HDGFL2-208ENST00000616600 PDS5BQ9NTI5 1447 aa30.35■■■□□ 2.45
HDGFL2-208ENST00000616600 RRBP1Q9P2E9 1410 aaKnown RBP30.34■■■□□ 2.45
HDGFL2-208ENST00000616600 CUL7Q14999 1698 aa30.3■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms