RNA–Protein interactions for RNA: ENST00000616763.4

AGAP4-207, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene AGAP4, Length 2,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGAP4-207ENST00000616763 NISCHQ9Y2I1 1504 aa39.64■■■■□ 3.94
AGAP4-207ENST00000616763 SHROOM4Q9ULL8 1493 aa34.9■■■■□ 3.18
AGAP4-207ENST00000616763 SUPT5HO00267 1087 aaKnown RBP34.52■■■■□ 3.12
AGAP4-207ENST00000616763 MYO15BQ96JP2 1530 aa33.6■■■□□ 2.97
AGAP4-207ENST00000616763 CHIC1Q5VXU3 224 aa33.58■■■□□ 2.97
AGAP4-207ENST00000616763 ZCCHC6Q5VYS8 1495 aaKnown RBP33.57■■■□□ 2.96
AGAP4-207ENST00000616763 HRCP23327 699 aa33.54■■■□□ 2.96
AGAP4-207ENST00000616763 DCAF8L2P0C7V8 631 aa33.5■■■□□ 2.95
AGAP4-207ENST00000616763 PCGF6Q9BYE7 350 aa33.39■■■□□ 2.94
AGAP4-207ENST00000616763 PPARGC1BQ86YN6 1023 aaKnown RBP33.11■■■□□ 2.89
AGAP4-207ENST00000616763 CCDC180Q9P1Z9 1646 aa33.08■■■□□ 2.89
AGAP4-207ENST00000616763 LOC105371045A0A1W2PR82 267 aa32.9■■■□□ 2.86
AGAP4-207ENST00000616763 DCAF1Q9Y4B6 1507 aa32.51■■■□□ 2.8
AGAP4-207ENST00000616763 TRIM26Q12899 539 aaPredicted RBP32.33■■■□□ 2.77
AGAP4-207ENST00000616763 FAM9AQ8IZU1 332 aaPredicted RBP31.98■■■□□ 2.71
AGAP4-207ENST00000616763 EHMT2Q96KQ7 1210 aa31.95■■■□□ 2.71
AGAP4-207ENST00000616763 TRIM41Q8WV44 630 aa31.9■■■□□ 2.7
AGAP4-207ENST00000616763 ABCC9O60706 1549 aa31.75■■■□□ 2.67
AGAP4-207ENST00000616763 RSF1Q96T23 1441 aaPredicted RBP31.74■■■□□ 2.67
AGAP4-207ENST00000616763 ZEB1P37275 1124 aaPredicted RBP31.72■■■□□ 2.67
AGAP4-207ENST00000616763 SCRIBQ14160 1630 aa31.63■■■□□ 2.65
AGAP4-207ENST00000616763 RB1CC1Q8TDY2 1594 aa31.51■■■□□ 2.63
AGAP4-207ENST00000616763 SCAF1Q9H7N4 1312 aaKnown RBP31.43■■■□□ 2.62
AGAP4-207ENST00000616763 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.2■■■□□ 2.59
AGAP4-207ENST00000616763 CECR2Q9BXF3 1484 aa31.15■■■□□ 2.58
AGAP4-207ENST00000616763 PELP1Q8IZL8 1130 aaKnown RBP31.11■■■□□ 2.57
AGAP4-207ENST00000616763 CCER1Q8TC90 406 aaPredicted RBP31.06■■■□□ 2.56
AGAP4-207ENST00000616763 TTBK1Q5TCY1 1321 aaPredicted RBP31.01■■■□□ 2.55
AGAP4-207ENST00000616763 MROH2BQ7Z745 1585 aa31■■■□□ 2.55
AGAP4-207ENST00000616763 WIZO95785 1651 aa30.88■■■□□ 2.53
AGAP4-207ENST00000616763 NEUROD1Q13562 356 aa30.86■■■□□ 2.53
AGAP4-207ENST00000616763 ACIN1Q9UKV3 1341 aaKnown RBP30.82■■■□□ 2.52
AGAP4-207ENST00000616763 DIEXFQ68CQ4 756 aaKnown RBP30.73■■■□□ 2.51
AGAP4-207ENST00000616763 GTF3C3Q9Y5Q9 886 aa30.62■■■□□ 2.49
AGAP4-207ENST00000616763 NACADO15069 1562 aa30.59■■■□□ 2.49
AGAP4-207ENST00000616763 ABCC8Q09428 1581 aa30.52■■■□□ 2.48
AGAP4-207ENST00000616763 CCDC88BA6NC98 1476 aa30.49■■■□□ 2.47
AGAP4-207ENST00000616763 CENPBP07199 599 aaPredicted RBP30.49■■■□□ 2.47
AGAP4-207ENST00000616763 BAZ1AQ9NRL2 1556 aaPredicted RBP30.47■■■□□ 2.47
AGAP4-207ENST00000616763 EIF4G1Q04637 1599 aaKnown RBP30.42■■■□□ 2.46
AGAP4-207ENST00000616763 CEP162Q5TB80 1403 aa30.42■■■□□ 2.46
AGAP4-207ENST00000616763 UBTFP17480 764 aaKnown RBP30.39■■■□□ 2.46
AGAP4-207ENST00000616763 SOGA1O94964 1423 aa30.39■■■□□ 2.46
AGAP4-207ENST00000616763 WRNQ14191 1432 aaPredicted RBP eCLIP30.32■■■□□ 2.44
AGAP4-207ENST00000616763 YTHDC1Q96MU7 727 aaKnown RBP30.31■■■□□ 2.44
AGAP4-207ENST00000616763 ZNF316A6NFI3 1004 aaPredicted RBP30.26■■■□□ 2.43
AGAP4-207ENST00000616763 RUSC2Q8N2Y8 1516 aa30.25■■■□□ 2.43
AGAP4-207ENST00000616763 CSRNP3Q8WYN3 585 aa30.25■■■□□ 2.43
AGAP4-207ENST00000616763 TNIKQ9UKE5 1360 aa30.22■■■□□ 2.43
AGAP4-207ENST00000616763 HNRNPUL2Q1KMD3 747 aaKnown RBP30.17■■■□□ 2.42
AGAP4-207ENST00000616763 TOP2AP11388 1531 aaKnown RBP30.17■■■□□ 2.42
AGAP4-207ENST00000616763 SMARCA2P51531 1590 aa30.11■■■□□ 2.41
AGAP4-207ENST00000616763 MIER1Q8N108 512 aa30.06■■■□□ 2.4
AGAP4-207ENST00000616763 SMARCA4P51532 1647 aa30.03■■■□□ 2.4
AGAP4-207ENST00000616763 RANGAP1P46060 587 aaPredicted RBP29.97■■■□□ 2.39
AGAP4-207ENST00000616763 GOLGA3Q08378 1498 aa29.92■■■□□ 2.38
AGAP4-207ENST00000616763 EEA1Q15075 1411 aa29.92■■■□□ 2.38
AGAP4-207ENST00000616763 PABPN1Q86U42 306 aaKnown RBP eCLIP29.84■■■□□ 2.37
AGAP4-207ENST00000616763 APLP2Q06481 763 aa29.75■■■□□ 2.35
AGAP4-207ENST00000616763 CLIP1P30622 1438 aa29.73■■■□□ 2.35
AGAP4-207ENST00000616763 UNC13AQ9UPW8 1703 aa29.68■■■□□ 2.34
AGAP4-207ENST00000616763 CEP164Q9UPV0 1460 aa29.66■■■□□ 2.34
AGAP4-207ENST00000616763 SYNJ1O43426 1573 aa29.6■■■□□ 2.33
AGAP4-207ENST00000616763 MYT1Q01538 1121 aa29.58■■■□□ 2.33
AGAP4-207ENST00000616763 VPS8Q8N3P4 1428 aa29.58■■■□□ 2.33
AGAP4-207ENST00000616763 RAPGEF2Q9Y4G8 1499 aa29.54■■■□□ 2.32
AGAP4-207ENST00000616763 KIF21BO75037 1637 aa29.49■■■□□ 2.31
AGAP4-207ENST00000616763 KANK4Q5T7N3 995 aaPredicted RBP29.35■■■□□ 2.29
AGAP4-207ENST00000616763 DHX57Q6P158 1386 aaKnown RBP29.33■■■□□ 2.29
AGAP4-207ENST00000616763 BAZ1BQ9UIG0 1483 aaKnown RBP29.32■■■□□ 2.28
AGAP4-207ENST00000616763 BICRAQ9NZM4 1560 aa29.3■■■□□ 2.28
AGAP4-207ENST00000616763 SUPT16HQ9Y5B9 1047 aaKnown RBP29.25■■■□□ 2.27
AGAP4-207ENST00000616763 ITGAEP38570 1179 aa29.24■■■□□ 2.27
AGAP4-207ENST00000616763 PEG3Q9GZU2 1588 aa29.22■■■□□ 2.27
AGAP4-207ENST00000616763 ATAD2BQ9ULI0 1458 aa29.21■■■□□ 2.27
AGAP4-207ENST00000616763 CLSPNQ9HAW4 1339 aa29.16■■■□□ 2.26
AGAP4-207ENST00000616763 ARAP1Q96P48 1450 aa29.11■■■□□ 2.25
AGAP4-207ENST00000616763 KCNH8Q96L42 1107 aa29.1■■■□□ 2.25
AGAP4-207ENST00000616763 TOP2BQ02880 1626 aa29.04■■■□□ 2.24
AGAP4-207ENST00000616763 PRXQ9BXM0 1461 aa28.99■■■□□ 2.23
AGAP4-207ENST00000616763 TSHZ2Q9NRE2 1034 aa28.94■■■□□ 2.22
AGAP4-207ENST00000616763 RRBP1Q9P2E9 1410 aaKnown RBP28.93■■■□□ 2.22
AGAP4-207ENST00000616763 CCNB3Q8WWL7 1395 aa28.92■■■□□ 2.22
AGAP4-207ENST00000616763 BCANQ96GW7 911 aa28.91■■■□□ 2.22
AGAP4-207ENST00000616763 ERICH3Q5RHP9 1530 aa28.89■■■□□ 2.22
AGAP4-207ENST00000616763 BIVM-ERCC5R4GMW8 1640 aa28.83■■■□□ 2.21
AGAP4-207ENST00000616763 DDX10Q13206 875 aaKnown RBP28.82■■■□□ 2.2
AGAP4-207ENST00000616763 RAB3GAP2Q9H2M9 1393 aa28.81■■■□□ 2.2
AGAP4-207ENST00000616763 SIN3AQ96ST3 1273 aa28.79■■■□□ 2.2
AGAP4-207ENST00000616763 KIF27Q86VH2 1401 aa28.78■■■□□ 2.2
AGAP4-207ENST00000616763 ARHGAP35Q9NRY4 1499 aa28.78■■■□□ 2.2
AGAP4-207ENST00000616763 CUX1P39880 1505 aa28.76■■■□□ 2.2
AGAP4-207ENST00000616763 HIRIP3Q9BW71 556 aaPredicted RBP28.76■■■□□ 2.19
AGAP4-207ENST00000616763 CUX2O14529 1486 aa28.73■■■□□ 2.19
AGAP4-207ENST00000616763 FKBP8Q14318 412 aa28.72■■■□□ 2.19
AGAP4-207ENST00000616763 FAM50AQ14320 339 aaKnown RBP28.7■■■□□ 2.18
AGAP4-207ENST00000616763 MAPKBP1O60336 1514 aa28.67■■■□□ 2.18
AGAP4-207ENST00000616763 ATP1B4Q9UN42 357 aaPredicted RBP28.66■■■□□ 2.18
AGAP4-207ENST00000616763 P3H3Q8IVL6 736 aa28.63■■■□□ 2.17
AGAP4-207ENST00000616763 ANP32EQ9BTT0 268 aa28.61■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms