RNA–Protein interactions for RNA: ENST00000285681.6

USP25-202, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 1 (best) BASIC

Gene USP25, Length 5,216 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-202ENST00000285681 DCAF8L2P0C7V8 631 aa35.81■■■■□ 3.32
USP25-202ENST00000285681 NISCHQ9Y2I1 1504 aa34.22■■■■□ 3.07
USP25-202ENST00000285681 SUPT5HO00267 1087 aaKnown RBP33.68■■■□□ 2.98
USP25-202ENST00000285681 SHROOM4Q9ULL8 1493 aa33.16■■■□□ 2.9
USP25-202ENST00000285681 EHMT2Q96KQ7 1210 aa32.51■■■□□ 2.79
USP25-202ENST00000285681 APLP2Q06481 763 aa32.06■■■□□ 2.72
USP25-202ENST00000285681 FAM9AQ8IZU1 332 aaPredicted RBP31.77■■■□□ 2.68
USP25-202ENST00000285681 TTBK1Q5TCY1 1321 aaPredicted RBP31.35■■■□□ 2.61
USP25-202ENST00000285681 PELP1Q8IZL8 1130 aaKnown RBP31.26■■■□□ 2.59
USP25-202ENST00000285681 TRIM41Q8WV44 630 aa31.26■■■□□ 2.59
USP25-202ENST00000285681 RANGAP1P46060 587 aaPredicted RBP31.26■■■□□ 2.59
USP25-202ENST00000285681 ATP1B4Q9UN42 357 aaPredicted RBP31.05■■■□□ 2.56
USP25-202ENST00000285681 PCGF6Q9BYE7 350 aa31.01■■■□□ 2.56
USP25-202ENST00000285681 UBTFP17480 764 aaKnown RBP30.93■■■□□ 2.54
USP25-202ENST00000285681 CCER1Q8TC90 406 aaPredicted RBP30.64■■■□□ 2.5
USP25-202ENST00000285681 ZEB1P37275 1124 aaPredicted RBP30.55■■■□□ 2.48
USP25-202ENST00000285681 CENPBP07199 599 aaPredicted RBP30.28■■■□□ 2.44
USP25-202ENST00000285681 PPARGC1BQ86YN6 1023 aaKnown RBP30.13■■■□□ 2.41
USP25-202ENST00000285681 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.08■■■□□ 2.41
USP25-202ENST00000285681 HNRNPUL2Q1KMD3 747 aaKnown RBP30.08■■■□□ 2.41
USP25-202ENST00000285681 MYT1LQ9UL68 1186 aa29.99■■■□□ 2.39
USP25-202ENST00000285681 ERICH6Q7L0X2 663 aa29.87■■■□□ 2.37
USP25-202ENST00000285681 ITGAEP38570 1179 aa29.86■■■□□ 2.37
USP25-202ENST00000285681 TRIM26Q12899 539 aaPredicted RBP29.82■■■□□ 2.36
USP25-202ENST00000285681 ABCC9O60706 1549 aa29.82■■■□□ 2.36
USP25-202ENST00000285681 NEFLP07196 543 aa29.8■■■□□ 2.36
USP25-202ENST00000285681 CHIC1Q5VXU3 224 aa29.73■■■□□ 2.35
USP25-202ENST00000285681 PABPN1Q86U42 306 aaKnown RBP eCLIP29.73■■■□□ 2.35
USP25-202ENST00000285681 YTHDC1Q96MU7 727 aaKnown RBP29.71■■■□□ 2.35
USP25-202ENST00000285681 LOC105371045A0A1W2PR82 267 aa29.68■■■□□ 2.34
USP25-202ENST00000285681 POLR3GLQ9BT43 218 aa29.53■■■□□ 2.32
USP25-202ENST00000285681 HRCP23327 699 aa29.23■■■□□ 2.27
USP25-202ENST00000285681 FAM50AQ14320 339 aaKnown RBP29.17■■■□□ 2.26
USP25-202ENST00000285681 CNGB1Q14028 1251 aaPredicted RBP29.17■■■□□ 2.26
USP25-202ENST00000285681 SLC4A1APQ9BWU0 796 aaKnown RBP29.09■■■□□ 2.25
USP25-202ENST00000285681 FBLN2P98095 1184 aa29.06■■■□□ 2.24
USP25-202ENST00000285681 TRIM52Q96A61 297 aa29.02■■■□□ 2.24
USP25-202ENST00000285681 DAXXQ9UER7 740 aaPredicted RBP28.89■■■□□ 2.22
USP25-202ENST00000285681 NEUROD1Q13562 356 aa28.76■■■□□ 2.19
USP25-202ENST00000285681 DIEXFQ68CQ4 756 aaKnown RBP28.64■■■□□ 2.17
USP25-202ENST00000285681 ZNF326Q5BKZ1 582 aaKnown RBP28.63■■■□□ 2.17
USP25-202ENST00000285681 P3H3Q8IVL6 736 aa28.63■■■□□ 2.17
USP25-202ENST00000285681 CSRNP3Q8WYN3 585 aa28.62■■■□□ 2.17
USP25-202ENST00000285681 ARID3CA6NKF2 412 aa28.56■■■□□ 2.16
USP25-202ENST00000285681 SCRIBQ14160 1630 aa28.51■■■□□ 2.16
USP25-202ENST00000285681 CLSPNQ9HAW4 1339 aa28.46■■■□□ 2.15
USP25-202ENST00000285681 CDK11AQ9UQ88 783 aaPredicted RBP28.43■■■□□ 2.14
USP25-202ENST00000285681 ZNF777Q9ULD5 760 aaPredicted RBP28.39■■■□□ 2.14
USP25-202ENST00000285681 ANP32CO43423 234 aa28.34■■■□□ 2.13
USP25-202ENST00000285681 BCANQ96GW7 911 aa28.34■■■□□ 2.13
USP25-202ENST00000285681 MYT1Q01538 1121 aa28.28■■■□□ 2.12
USP25-202ENST00000285681 ZCCHC6Q5VYS8 1495 aaKnown RBP28.24■■■□□ 2.11
USP25-202ENST00000285681 ZNF316A6NFI3 1004 aaPredicted RBP28.2■■■□□ 2.1
USP25-202ENST00000285681 ESF1Q9H501 851 aaKnown RBP28.17■■■□□ 2.1
USP25-202ENST00000285681 NPM1P06748 294 aaKnown RBP eCLIP28.16■■■□□ 2.1
USP25-202ENST00000285681 NEFMP07197 916 aa28.11■■■□□ 2.09
USP25-202ENST00000285681 ZBTB47Q9UFB7 747 aaPredicted RBP28.09■■■□□ 2.09
USP25-202ENST00000285681 SLC24A1O60721 1099 aa28.07■■■□□ 2.08
USP25-202ENST00000285681 RTL5Q5HYW3 569 aaPredicted RBP28.01■■■□□ 2.07
USP25-202ENST00000285681 CANXP27824 592 aaKnown RBP27.96■■■□□ 2.07
USP25-202ENST00000285681 STAG3Q9UJ98 1225 aa27.96■■■□□ 2.07
USP25-202ENST00000285681 CHGAP10645 457 aaKnown RBP27.96■■■□□ 2.07
USP25-202ENST00000285681 CCDC180Q9P1Z9 1646 aa27.92■■■□□ 2.06
USP25-202ENST00000285681 CHMP7Q8WUX9 453 aaPredicted RBP27.86■■■□□ 2.05
USP25-202ENST00000285681 TONSLQ96HA7 1378 aa27.85■■■□□ 2.05
USP25-202ENST00000285681 PLPPR3Q6T4P5 718 aa27.82■■■□□ 2.04
USP25-202ENST00000285681 RB1CC1Q8TDY2 1594 aa27.79■■■□□ 2.04
USP25-202ENST00000285681 BCL11AQ9H165 835 aa27.79■■■□□ 2.04
USP25-202ENST00000285681 CHIC2Q9UKJ5 165 aa27.77■■■□□ 2.04
USP25-202ENST00000285681 TSPY4P0CV99 314 aa27.75■■■□□ 2.03
USP25-202ENST00000285681 TSPY10P0CW01 314 aa27.75■■■□□ 2.03
USP25-202ENST00000285681 GTF3C3Q9Y5Q9 886 aa27.74■■■□□ 2.03
USP25-202ENST00000285681 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.74■■■□□ 2.037e-9■■■□□ 15.8
USP25-202ENST00000285681 MTUS2Q5JR59 1369 aa27.69■■■□□ 2.02
USP25-202ENST00000285681 CLIP1P30622 1438 aa27.53■■■□□ 2
USP25-202ENST00000285681 DCAF1Q9Y4B6 1507 aa27.5■■□□□ 1.99
USP25-202ENST00000285681 DDX10Q13206 875 aaKnown RBP27.48■■□□□ 1.99
USP25-202ENST00000285681 KDM2AQ9Y2K7 1162 aa27.46■■□□□ 1.99
USP25-202ENST00000285681 KCNH8Q96L42 1107 aa27.46■■□□□ 1.99
USP25-202ENST00000285681 NACADO15069 1562 aa27.45■■□□□ 1.98
USP25-202ENST00000285681 RSF1Q96T23 1441 aaPredicted RBP27.45■■□□□ 1.98
USP25-202ENST00000285681 PLEKHD1A6NEE1 506 aa27.44■■□□□ 1.98
USP25-202ENST00000285681 BAZ1BQ9UIG0 1483 aaKnown RBP27.42■■□□□ 1.98
USP25-202ENST00000285681 FAM9BQ8IZU0 186 aa27.41■■□□□ 1.98
USP25-202ENST00000285681 HNRNPUQ00839 825 aaKnown RBP eCLIP27.4■■□□□ 1.98
USP25-202ENST00000285681 EEA1Q15075 1411 aa27.39■■□□□ 1.97
USP25-202ENST00000285681 ACIN1Q9UKV3 1341 aaKnown RBP27.36■■□□□ 1.97
USP25-202ENST00000285681 TMC1Q8TDI8 760 aa27.36■■□□□ 1.97
USP25-202ENST00000285681 WRNQ14191 1432 aaPredicted RBP eCLIP27.34■■□□□ 1.97
USP25-202ENST00000285681 RRP7BPQ9NSQ0 103 aa27.34■■□□□ 1.97
USP25-202ENST00000285681 SALL2Q9Y467 1007 aaPredicted RBP27.32■■□□□ 1.96
USP25-202ENST00000285681 ANP32AP39687 249 aaKnown RBP27.31■■□□□ 1.96
USP25-202ENST00000285681 GOLGA3Q08378 1498 aa27.3■■□□□ 1.96
USP25-202ENST00000285681 WDR43Q15061 677 aaKnown RBP eCLIP27.27■■□□□ 1.96
USP25-202ENST00000285681 KIF27Q86VH2 1401 aa27.26■■□□□ 1.95
USP25-202ENST00000285681 PPP1R15AO75807 674 aaPredicted RBP27.24■■□□□ 1.95
USP25-202ENST00000285681 FKBP8Q14318 412 aa27.22■■□□□ 1.95
USP25-202ENST00000285681 NPM2Q86SE8 214 aaKnown RBP27.21■■□□□ 1.95
USP25-202ENST00000285681 SCAF1Q9H7N4 1312 aaKnown RBP27.21■■□□□ 1.95
USP25-202ENST00000285681 CFDP1Q9UEE9 299 aaPredicted RBP27.19■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 119.9 ms