RNA–Protein interactions for RNA: ENST00000248420.9

CACTIN-202, Transcript of cactin, spliceosome C complex subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CACTIN, Length 2,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-202ENST00000248420 NISCHQ9Y2I1 1504 aa39.87■■■■□ 3.97
CACTIN-202ENST00000248420 SHROOM4Q9ULL8 1493 aa35.11■■■■□ 3.21
CACTIN-202ENST00000248420 SUPT5HO00267 1087 aaKnown RBP34.68■■■■□ 3.14
CACTIN-202ENST00000248420 ZCCHC6Q5VYS8 1495 aaKnown RBP33.76■■■□□ 2.99
CACTIN-202ENST00000248420 DCAF8L2P0C7V8 631 aa33.75■■■□□ 2.99
CACTIN-202ENST00000248420 MYO15BQ96JP2 1530 aa33.74■■■□□ 2.99
CACTIN-202ENST00000248420 CHIC1Q5VXU3 224 aa33.69■■■□□ 2.98
CACTIN-202ENST00000248420 HRCP23327 699 aa33.54■■■□□ 2.96
CACTIN-202ENST00000248420 PCGF6Q9BYE7 350 aa33.46■■■□□ 2.95
CACTIN-202ENST00000248420 CCDC180Q9P1Z9 1646 aa33.26■■■□□ 2.92
CACTIN-202ENST00000248420 PPARGC1BQ86YN6 1023 aaKnown RBP33.17■■■□□ 2.9
CACTIN-202ENST00000248420 LOC105371045A0A1W2PR82 267 aa33.02■■■□□ 2.88
CACTIN-202ENST00000248420 DCAF1Q9Y4B6 1507 aa32.55■■■□□ 2.8
CACTIN-202ENST00000248420 TRIM26Q12899 539 aaPredicted RBP32.36■■■□□ 2.77
CACTIN-202ENST00000248420 FAM9AQ8IZU1 332 aaPredicted RBP32.14■■■□□ 2.74
CACTIN-202ENST00000248420 EHMT2Q96KQ7 1210 aa32.14■■■□□ 2.74
CACTIN-202ENST00000248420 TRIM41Q8WV44 630 aa32.03■■■□□ 2.72
CACTIN-202ENST00000248420 ABCC9O60706 1549 aa31.93■■■□□ 2.7
CACTIN-202ENST00000248420 RSF1Q96T23 1441 aaPredicted RBP31.91■■■□□ 2.7
CACTIN-202ENST00000248420 SCRIBQ14160 1630 aa31.85■■■□□ 2.69
CACTIN-202ENST00000248420 RB1CC1Q8TDY2 1594 aa31.69■■■□□ 2.66
CACTIN-202ENST00000248420 ZEB1P37275 1124 aaPredicted RBP31.68■■■□□ 2.66
CACTIN-202ENST00000248420 SCAF1Q9H7N4 1312 aaKnown RBP31.41■■■□□ 2.62
CACTIN-202ENST00000248420 CECR2Q9BXF3 1484 aa31.36■■■□□ 2.61
CACTIN-202ENST00000248420 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.29■■■□□ 2.6
CACTIN-202ENST00000248420 MROH2BQ7Z745 1585 aa31.2■■■□□ 2.58
CACTIN-202ENST00000248420 TTBK1Q5TCY1 1321 aaPredicted RBP31.18■■■□□ 2.58
CACTIN-202ENST00000248420 CCER1Q8TC90 406 aaPredicted RBP31.11■■■□□ 2.57
CACTIN-202ENST00000248420 WIZO95785 1651 aa31.06■■■□□ 2.56
CACTIN-202ENST00000248420 PELP1Q8IZL8 1130 aaKnown RBP30.92■■■□□ 2.54
CACTIN-202ENST00000248420 NEUROD1Q13562 356 aa30.87■■■□□ 2.53
CACTIN-202ENST00000248420 ACIN1Q9UKV3 1341 aaKnown RBP30.79■■■□□ 2.52
CACTIN-202ENST00000248420 NACADO15069 1562 aa30.78■■■□□ 2.52
CACTIN-202ENST00000248420 DIEXFQ68CQ4 756 aaKnown RBP30.75■■■□□ 2.51
CACTIN-202ENST00000248420 ABCC8Q09428 1581 aa30.7■■■□□ 2.51
CACTIN-202ENST00000248420 CCDC88BA6NC98 1476 aa30.67■■■□□ 2.5
CACTIN-202ENST00000248420 BAZ1AQ9NRL2 1556 aaPredicted RBP30.64■■■□□ 2.49
CACTIN-202ENST00000248420 GTF3C3Q9Y5Q9 886 aa30.61■■■□□ 2.49
CACTIN-202ENST00000248420 EIF4G1Q04637 1599 aaKnown RBP30.59■■■□□ 2.49
CACTIN-202ENST00000248420 SOGA1O94964 1423 aa30.56■■■□□ 2.48
CACTIN-202ENST00000248420 CEP162Q5TB80 1403 aa30.54■■■□□ 2.48
CACTIN-202ENST00000248420 UBTFP17480 764 aaKnown RBP30.52■■■□□ 2.48
CACTIN-202ENST00000248420 CENPBP07199 599 aaPredicted RBP30.44■■■□□ 2.46
CACTIN-202ENST00000248420 RUSC2Q8N2Y8 1516 aa30.43■■■□□ 2.46
CACTIN-202ENST00000248420 WRNQ14191 1432 aaPredicted RBP eCLIP30.4■■■□□ 2.465e-6■■■■■ 54.3
CACTIN-202ENST00000248420 CSRNP3Q8WYN3 585 aa30.37■■■□□ 2.45
CACTIN-202ENST00000248420 YTHDC1Q96MU7 727 aaKnown RBP30.37■■■□□ 2.45
CACTIN-202ENST00000248420 TOP2AP11388 1531 aaKnown RBP30.33■■■□□ 2.45
CACTIN-202ENST00000248420 TNIKQ9UKE5 1360 aa30.32■■■□□ 2.44
CACTIN-202ENST00000248420 SMARCA2P51531 1590 aa30.28■■■□□ 2.44
CACTIN-202ENST00000248420 HNRNPUL2Q1KMD3 747 aaKnown RBP30.28■■■□□ 2.44
CACTIN-202ENST00000248420 ZNF316A6NFI3 1004 aaPredicted RBP30.28■■■□□ 2.44
CACTIN-202ENST00000248420 SMARCA4P51532 1647 aa30.21■■■□□ 2.43
CACTIN-202ENST00000248420 RANGAP1P46060 587 aaPredicted RBP30.16■■■□□ 2.42
CACTIN-202ENST00000248420 PABPN1Q86U42 306 aaKnown RBP eCLIP30.11■■■□□ 2.41
CACTIN-202ENST00000248420 MIER1Q8N108 512 aa30.1■■■□□ 2.41
CACTIN-202ENST00000248420 GOLGA3Q08378 1498 aa30.04■■■□□ 2.4
CACTIN-202ENST00000248420 EEA1Q15075 1411 aa30.01■■■□□ 2.39
CACTIN-202ENST00000248420 UNC13AQ9UPW8 1703 aa29.87■■■□□ 2.37
CACTIN-202ENST00000248420 CLIP1P30622 1438 aa29.86■■■□□ 2.37
CACTIN-202ENST00000248420 APLP2Q06481 763 aa29.83■■■□□ 2.37
CACTIN-202ENST00000248420 CEP164Q9UPV0 1460 aa29.78■■■□□ 2.36
CACTIN-202ENST00000248420 SYNJ1O43426 1573 aa29.78■■■□□ 2.36
CACTIN-202ENST00000248420 RAPGEF2Q9Y4G8 1499 aa29.71■■■□□ 2.35
CACTIN-202ENST00000248420 VPS8Q8N3P4 1428 aa29.69■■■□□ 2.34
CACTIN-202ENST00000248420 KIF21BO75037 1637 aa29.6■■■□□ 2.33
CACTIN-202ENST00000248420 BICRAQ9NZM4 1560 aa29.53■■■□□ 2.32
CACTIN-202ENST00000248420 KANK4Q5T7N3 995 aaPredicted RBP29.49■■■□□ 2.31
CACTIN-202ENST00000248420 BAZ1BQ9UIG0 1483 aaKnown RBP29.42■■■□□ 2.3
CACTIN-202ENST00000248420 DHX57Q6P158 1386 aaKnown RBP29.42■■■□□ 2.3
CACTIN-202ENST00000248420 ATAD2BQ9ULI0 1458 aa29.41■■■□□ 2.3
CACTIN-202ENST00000248420 PEG3Q9GZU2 1588 aa29.38■■■□□ 2.29
CACTIN-202ENST00000248420 ITGAEP38570 1179 aa29.38■■■□□ 2.29
CACTIN-202ENST00000248420 MYT1Q01538 1121 aa29.35■■■□□ 2.29
CACTIN-202ENST00000248420 SUPT16HQ9Y5B9 1047 aaKnown RBP29.26■■■□□ 2.27
CACTIN-202ENST00000248420 ARAP1Q96P48 1450 aa29.25■■■□□ 2.27
CACTIN-202ENST00000248420 KCNH8Q96L42 1107 aa29.19■■■□□ 2.26
CACTIN-202ENST00000248420 CLSPNQ9HAW4 1339 aa29.19■■■□□ 2.26
CACTIN-202ENST00000248420 TOP2BQ02880 1626 aa29.19■■■□□ 2.26
CACTIN-202ENST00000248420 PRXQ9BXM0 1461 aa29.14■■■□□ 2.25
CACTIN-202ENST00000248420 CCNB3Q8WWL7 1395 aa29.03■■■□□ 2.24
CACTIN-202ENST00000248420 RRBP1Q9P2E9 1410 aaKnown RBP29.03■■■□□ 2.24
CACTIN-202ENST00000248420 ERICH3Q5RHP9 1530 aa29.01■■■□□ 2.24
CACTIN-202ENST00000248420 BIVM-ERCC5R4GMW8 1640 aa28.97■■■□□ 2.23
CACTIN-202ENST00000248420 BCANQ96GW7 911 aa28.96■■■□□ 2.23
CACTIN-202ENST00000248420 CUX1P39880 1505 aa28.95■■■□□ 2.22
CACTIN-202ENST00000248420 KIF27Q86VH2 1401 aa28.93■■■□□ 2.22
CACTIN-202ENST00000248420 RAB3GAP2Q9H2M9 1393 aa28.93■■■□□ 2.22
CACTIN-202ENST00000248420 ARHGAP35Q9NRY4 1499 aa28.93■■■□□ 2.22
CACTIN-202ENST00000248420 TSHZ2Q9NRE2 1034 aa28.92■■■□□ 2.22
CACTIN-202ENST00000248420 SIN3AQ96ST3 1273 aa28.9■■■□□ 2.22
CACTIN-202ENST00000248420 DDX10Q13206 875 aaKnown RBP28.88■■■□□ 2.21
CACTIN-202ENST00000248420 HIRIP3Q9BW71 556 aaPredicted RBP28.88■■■□□ 2.21
CACTIN-202ENST00000248420 FAM50AQ14320 339 aaKnown RBP28.83■■■□□ 2.21
CACTIN-202ENST00000248420 ATP1B4Q9UN42 357 aaPredicted RBP28.83■■■□□ 2.21
CACTIN-202ENST00000248420 CUX2O14529 1486 aa28.81■■■□□ 2.2
CACTIN-202ENST00000248420 P3H3Q8IVL6 736 aa28.81■■■□□ 2.2
CACTIN-202ENST00000248420 MAPKBP1O60336 1514 aa28.78■■■□□ 2.2
CACTIN-202ENST00000248420 FKBP8Q14318 412 aa28.74■■■□□ 2.19
CACTIN-202ENST00000248420 PHLDB1Q86UU1 1377 aa28.69■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms