RNA–Protein interactions for RNA: ENST00000409520.6

TRABD2A-203, Transcript of TraB domain containing 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRABD2A, Length 1,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRABD2A-203ENST00000409520 NISCHQ9Y2I1 1504 aa50.49■■■■■ 5.67
TRABD2A-203ENST00000409520 CCDC180Q9P1Z9 1646 aa44.43■■■■■ 4.7
TRABD2A-203ENST00000409520 ABCC9O60706 1549 aa42.67■■■■■ 4.42
TRABD2A-203ENST00000409520 ZCCHC6Q5VYS8 1495 aaKnown RBP42.27■■■■■ 4.36
TRABD2A-203ENST00000409520 DCAF8L2P0C7V8 631 aa41.88■■■■■ 4.29
TRABD2A-203ENST00000409520 DCAF1Q9Y4B6 1507 aa41.75■■■■■ 4.27
TRABD2A-203ENST00000409520 MYO15BQ96JP2 1530 aa41.56■■■■■ 4.24
TRABD2A-203ENST00000409520 NACADO15069 1562 aa41.54■■■■■ 4.24
TRABD2A-203ENST00000409520 RB1CC1Q8TDY2 1594 aa41.37■■■■■ 4.21
TRABD2A-203ENST00000409520 SCRIBQ14160 1630 aa40.72■■■■■ 4.11
TRABD2A-203ENST00000409520 SHROOM4Q9ULL8 1493 aa40.6■■■■■ 4.09
TRABD2A-203ENST00000409520 UNC13AQ9UPW8 1703 aa40.55■■■■■ 4.08
TRABD2A-203ENST00000409520 BICRAQ9NZM4 1560 aa40.15■■■■■ 4.02
TRABD2A-203ENST00000409520 PABPN1Q86U42 306 aaKnown RBP eCLIP40.05■■■■■ 4
TRABD2A-203ENST00000409520 CECR2Q9BXF3 1484 aa39.29■■■■□ 3.88
TRABD2A-203ENST00000409520 BAZ1AQ9NRL2 1556 aaPredicted RBP39.05■■■■□ 3.84
TRABD2A-203ENST00000409520 EIF4G1Q04637 1599 aaKnown RBP39■■■■□ 3.83
TRABD2A-203ENST00000409520 SMARCA4P51532 1647 aa38.99■■■■□ 3.83
TRABD2A-203ENST00000409520 MROH2BQ7Z745 1585 aa38.98■■■■□ 3.83
TRABD2A-203ENST00000409520 RSF1Q96T23 1441 aaPredicted RBP38.86■■■■□ 3.81
TRABD2A-203ENST00000409520 SUPT5HO00267 1087 aaKnown RBP38.65■■■■□ 3.78
TRABD2A-203ENST00000409520 WIZO95785 1651 aa38.63■■■■□ 3.77
TRABD2A-203ENST00000409520 CC2D2AQ9P2K1 1620 aa38.62■■■■□ 3.77
TRABD2A-203ENST00000409520 PEG3Q9GZU2 1588 aa38.56■■■■□ 3.76
TRABD2A-203ENST00000409520 ATAD2BQ9ULI0 1458 aa38.53■■■■□ 3.76
TRABD2A-203ENST00000409520 SMARCA2P51531 1590 aa38.49■■■■□ 3.75
TRABD2A-203ENST00000409520 DNAJC5BQ9UF47 199 aa38.33■■■■□ 3.73
TRABD2A-203ENST00000409520 NCAPD3P42695 1498 aa38.33■■■■□ 3.73
TRABD2A-203ENST00000409520 BAZ1BQ9UIG0 1483 aaKnown RBP38.26■■■■□ 3.72
TRABD2A-203ENST00000409520 HMGXB3Q12766 1538 aa38.23■■■■□ 3.71
TRABD2A-203ENST00000409520 TOP2AP11388 1531 aaKnown RBP38.2■■■■□ 3.71
TRABD2A-203ENST00000409520 CCDC88BA6NC98 1476 aa37.78■■■■□ 3.64
TRABD2A-203ENST00000409520 CADPSQ9ULU8 1353 aa37.28■■■■□ 3.56
TRABD2A-203ENST00000409520 CFTRP13569 1480 aa37.27■■■■□ 3.56
TRABD2A-203ENST00000409520 NESP48681 1621 aa37.22■■■■□ 3.55
TRABD2A-203ENST00000409520 LAMC3Q9Y6N6 1575 aa37.17■■■■□ 3.54
TRABD2A-203ENST00000409520 PRDM2Q13029 1718 aa37.08■■■■□ 3.53
TRABD2A-203ENST00000409520 FANCD2Q9BXW9 1451 aa36.87■■■■□ 3.49
TRABD2A-203ENST00000409520 PDS5BQ9NTI5 1447 aa36.87■■■■□ 3.49
TRABD2A-203ENST00000409520 KIF21AQ7Z4S6 1674 aa36.8■■■■□ 3.48
TRABD2A-203ENST00000409520 ABCC8Q09428 1581 aa36.75■■■■□ 3.47
TRABD2A-203ENST00000409520 CEP164Q9UPV0 1460 aa36.72■■■■□ 3.47
TRABD2A-203ENST00000409520 ERCC6Q03468 1493 aa36.65■■■■□ 3.46
TRABD2A-203ENST00000409520 CHIC1Q5VXU3 224 aa36.6■■■■□ 3.45
TRABD2A-203ENST00000409520 WRNQ14191 1432 aaPredicted RBP eCLIP36.59■■■■□ 3.45
TRABD2A-203ENST00000409520 SYNJ1O43426 1573 aa36.5■■■■□ 3.43
TRABD2A-203ENST00000409520 CUX1P39880 1505 aa36.5■■■■□ 3.43
TRABD2A-203ENST00000409520 URB2Q14146 1524 aaKnown RBP36.47■■■■□ 3.43
TRABD2A-203ENST00000409520 MRC2Q9UBG0 1479 aa36.46■■■■□ 3.43
TRABD2A-203ENST00000409520 DNMBPQ6XZF7 1577 aa36.42■■■■□ 3.42
TRABD2A-203ENST00000409520 TOP2BQ02880 1626 aa36.41■■■■□ 3.42
TRABD2A-203ENST00000409520 THOC2Q8NI27 1593 aaKnown RBP36.4■■■■□ 3.42
TRABD2A-203ENST00000409520 TRIM41Q8WV44 630 aa36.4■■■■□ 3.42
TRABD2A-203ENST00000409520 TOPBP1Q92547 1522 aa36.4■■■■□ 3.42
TRABD2A-203ENST00000409520 BIVM-ERCC5R4GMW8 1640 aa36.4■■■■□ 3.42
TRABD2A-203ENST00000409520 WDR62O43379 1518 aa36.32■■■■□ 3.4
TRABD2A-203ENST00000409520 FGD5Q6ZNL6 1462 aa36.22■■■■□ 3.39
TRABD2A-203ENST00000409520 POLA1P09884 1462 aaPredicted RBP36.17■■■■□ 3.38
TRABD2A-203ENST00000409520 CUX2O14529 1486 aa36.03■■■■□ 3.36
TRABD2A-203ENST00000409520 RAD54L2Q9Y4B4 1467 aa36.03■■■■□ 3.36
TRABD2A-203ENST00000409520 SOGA1O94964 1423 aa36.01■■■■□ 3.35
TRABD2A-203ENST00000409520 TARBP1Q13395 1621 aaKnown RBP35.94■■■■□ 3.34
TRABD2A-203ENST00000409520 IFT140Q96RY7 1462 aa35.89■■■■□ 3.34
TRABD2A-203ENST00000409520 ABCA10Q8WWZ4 1543 aa35.88■■■■□ 3.33
TRABD2A-203ENST00000409520 WDR97A6NE52 1622 aa35.88■■■■□ 3.33
TRABD2A-203ENST00000409520 RUSC2Q8N2Y8 1516 aa35.81■■■■□ 3.32
TRABD2A-203ENST00000409520 ZNF608Q9ULD9 1512 aaPredicted RBP35.74■■■■□ 3.31
TRABD2A-203ENST00000409520 TDRD9Q8NDG6 1382 aaKnown RBP35.73■■■■□ 3.31
TRABD2A-203ENST00000409520 KIF27Q86VH2 1401 aa35.73■■■■□ 3.31
TRABD2A-203ENST00000409520 FAM9AQ8IZU1 332 aaPredicted RBP35.7■■■■□ 3.31
TRABD2A-203ENST00000409520 ABCA5Q8WWZ7 1642 aa35.68■■■■□ 3.3
TRABD2A-203ENST00000409520 AQRO60306 1485 aaKnown RBP eCLIP35.65■■■■□ 3.3
TRABD2A-203ENST00000409520 EEA1Q15075 1411 aa35.63■■■■□ 3.29
TRABD2A-203ENST00000409520 EIF4G3O43432 1585 aaKnown RBP35.62■■■■□ 3.29
TRABD2A-203ENST00000409520 GAPVD1Q14C86 1478 aa35.61■■■■□ 3.29
TRABD2A-203ENST00000409520 PBRM1Q86U86 1689 aa35.51■■■■□ 3.27
TRABD2A-203ENST00000409520 CSRNP3Q8WYN3 585 aa35.51■■■■□ 3.27
TRABD2A-203ENST00000409520 IGF1RP08069 1367 aa35.5■■■■□ 3.27
TRABD2A-203ENST00000409520 GRIN2BQ13224 1484 aa35.46■■■■□ 3.27
TRABD2A-203ENST00000409520 ERICH3Q5RHP9 1530 aa35.46■■■■□ 3.27
TRABD2A-203ENST00000409520 CUL7Q14999 1698 aa35.33■■■■□ 3.25
TRABD2A-203ENST00000409520 SNAPC4Q5SXM2 1469 aa35.32■■■■□ 3.24
TRABD2A-203ENST00000409520 PRXQ9BXM0 1461 aa35.31■■■■□ 3.24
TRABD2A-203ENST00000409520 CARMIL1Q5VZK9 1371 aa35.29■■■■□ 3.24
TRABD2A-203ENST00000409520 ADAMTS12P58397 1594 aa35.27■■■■□ 3.24
TRABD2A-203ENST00000409520 MAGI1Q96QZ7 1491 aaPredicted RBP35.26■■■■□ 3.23
TRABD2A-203ENST00000409520 KIF21BO75037 1637 aa35.25■■■■□ 3.23
TRABD2A-203ENST00000409520 EHMT2Q96KQ7 1210 aa35.23■■■■□ 3.23
TRABD2A-203ENST00000409520 FHAD1B1AJZ9 1412 aa35.21■■■■□ 3.23
TRABD2A-203ENST00000409520 RAPGEF2Q9Y4G8 1499 aa35.2■■■■□ 3.22
TRABD2A-203ENST00000409520 LOC105371045A0A1W2PR82 267 aa35.16■■■■□ 3.22
TRABD2A-203ENST00000409520 SYNJ2O15056 1496 aa35.12■■■■□ 3.21
TRABD2A-203ENST00000409520 GOLGA3Q08378 1498 aa35.12■■■■□ 3.21
TRABD2A-203ENST00000409520 FBLN2P98095 1184 aa35.04■■■■□ 3.2
TRABD2A-203ENST00000409520 CHMP7Q8WUX9 453 aaPredicted RBP35.04■■■■□ 3.2
TRABD2A-203ENST00000409520 GRIN2AQ12879 1464 aa35.03■■■■□ 3.2
TRABD2A-203ENST00000409520 CHD1O14646 1710 aa35■■■■□ 3.19
TRABD2A-203ENST00000409520 UBTFP17480 764 aaKnown RBP34.97■■■■□ 3.19
TRABD2A-203ENST00000409520 CEP170Q5SW79 1584 aa34.85■■■■□ 3.17
TRABD2A-203ENST00000409520 TNIKQ9UKE5 1360 aa34.85■■■■□ 3.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms