RNA–Protein interactions for RNA: ENST00000380392.3

C2CD4B-201, Transcript of C2 calcium dependent domain containing 4B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene C2CD4B, Length 1,579 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD4B-201ENST00000380392 NISCHQ9Y2I1 1504 aa53.01■■■■■ 6.08
C2CD4B-201ENST00000380392 CCDC180Q9P1Z9 1646 aa47.02■■■■■ 5.12
C2CD4B-201ENST00000380392 ABCC9O60706 1549 aa45.45■■■■■ 4.87
C2CD4B-201ENST00000380392 ZCCHC6Q5VYS8 1495 aaKnown RBP44.28■■■■■ 4.68
C2CD4B-201ENST00000380392 NACADO15069 1562 aa44.03■■■■■ 4.64
C2CD4B-201ENST00000380392 RB1CC1Q8TDY2 1594 aa43.97■■■■■ 4.63
C2CD4B-201ENST00000380392 MYO15BQ96JP2 1530 aa43.93■■■■■ 4.62
C2CD4B-201ENST00000380392 DCAF8L2P0C7V8 631 aa43.91■■■■■ 4.62
C2CD4B-201ENST00000380392 DCAF1Q9Y4B6 1507 aa43.91■■■■■ 4.62
C2CD4B-201ENST00000380392 UNC13AQ9UPW8 1703 aa43.13■■■■■ 4.49
C2CD4B-201ENST00000380392 SCRIBQ14160 1630 aa42.88■■■■■ 4.45
C2CD4B-201ENST00000380392 BICRAQ9NZM4 1560 aa42.68■■■■■ 4.42
C2CD4B-201ENST00000380392 PABPN1Q86U42 306 aaKnown RBP eCLIP42.48■■■■■ 4.39
C2CD4B-201ENST00000380392 SHROOM4Q9ULL8 1493 aa42.23■■■■■ 4.35
C2CD4B-201ENST00000380392 EIF4G1Q04637 1599 aaKnown RBP41.48■■■■■ 4.23
C2CD4B-201ENST00000380392 DNAJC5BQ9UF47 199 aa41.29■■■■■ 4.2
C2CD4B-201ENST00000380392 CECR2Q9BXF3 1484 aa41.24■■■■■ 4.19
C2CD4B-201ENST00000380392 CC2D2AQ9P2K1 1620 aa41.2■■■■■ 4.19
C2CD4B-201ENST00000380392 SMARCA4P51532 1647 aa41.08■■■■■ 4.17
C2CD4B-201ENST00000380392 BAZ1AQ9NRL2 1556 aaPredicted RBP41.06■■■■■ 4.16
C2CD4B-201ENST00000380392 MROH2BQ7Z745 1585 aa40.87■■■■■ 4.13
C2CD4B-201ENST00000380392 PEG3Q9GZU2 1588 aa40.69■■■■■ 4.1
C2CD4B-201ENST00000380392 ATAD2BQ9ULI0 1458 aa40.68■■■■■ 4.1
C2CD4B-201ENST00000380392 SMARCA2P51531 1590 aa40.67■■■■■ 4.1
C2CD4B-201ENST00000380392 NCAPD3P42695 1498 aa40.59■■■■■ 4.09
C2CD4B-201ENST00000380392 RSF1Q96T23 1441 aaPredicted RBP40.52■■■■■ 4.08
C2CD4B-201ENST00000380392 WIZO95785 1651 aa40.49■■■■■ 4.07
C2CD4B-201ENST00000380392 HMGXB3Q12766 1538 aa40.49■■■■■ 4.07
C2CD4B-201ENST00000380392 BAZ1BQ9UIG0 1483 aaKnown RBP40.36■■■■■ 4.05
C2CD4B-201ENST00000380392 TOP2AP11388 1531 aaKnown RBP40.07■■■■■ 4
C2CD4B-201ENST00000380392 SUPT5HO00267 1087 aaKnown RBP39.71■■■■□ 3.95
C2CD4B-201ENST00000380392 CCDC88BA6NC98 1476 aa39.54■■■■□ 3.92
C2CD4B-201ENST00000380392 NESP48681 1621 aa39.49■■■■□ 3.91
C2CD4B-201ENST00000380392 LAMC3Q9Y6N6 1575 aa39.49■■■■□ 3.91
C2CD4B-201ENST00000380392 CADPSQ9ULU8 1353 aa39.39■■■■□ 3.9
C2CD4B-201ENST00000380392 CFTRP13569 1480 aa39.3■■■■□ 3.88
C2CD4B-201ENST00000380392 PRDM2Q13029 1718 aa39.2■■■■□ 3.87
C2CD4B-201ENST00000380392 KIF21AQ7Z4S6 1674 aa39.14■■■■□ 3.86
C2CD4B-201ENST00000380392 PDS5BQ9NTI5 1447 aa39.12■■■■□ 3.85
C2CD4B-201ENST00000380392 ERCC6Q03468 1493 aa39.12■■■■□ 3.85
C2CD4B-201ENST00000380392 FANCD2Q9BXW9 1451 aa38.97■■■■□ 3.83
C2CD4B-201ENST00000380392 CEP164Q9UPV0 1460 aa38.89■■■■□ 3.82
C2CD4B-201ENST00000380392 THOC2Q8NI27 1593 aaKnown RBP38.89■■■■□ 3.82
C2CD4B-201ENST00000380392 MRC2Q9UBG0 1479 aa38.75■■■■□ 3.79
C2CD4B-201ENST00000380392 WDR62O43379 1518 aa38.65■■■■□ 3.78
C2CD4B-201ENST00000380392 URB2Q14146 1524 aaKnown RBP38.59■■■■□ 3.77
C2CD4B-201ENST00000380392 CUX2O14529 1486 aa38.58■■■■□ 3.77
C2CD4B-201ENST00000380392 DNMBPQ6XZF7 1577 aa38.44■■■■□ 3.74
C2CD4B-201ENST00000380392 TOPBP1Q92547 1522 aa38.42■■■■□ 3.74
C2CD4B-201ENST00000380392 ABCC8Q09428 1581 aa38.41■■■■□ 3.74
C2CD4B-201ENST00000380392 CUX1P39880 1505 aa38.31■■■■□ 3.72
C2CD4B-201ENST00000380392 WRNQ14191 1432 aaPredicted RBP eCLIP38.18■■■■□ 3.7
C2CD4B-201ENST00000380392 BIVM-ERCC5R4GMW8 1640 aa38.16■■■■□ 3.7
C2CD4B-201ENST00000380392 SYNJ1O43426 1573 aa38.15■■■■□ 3.7
C2CD4B-201ENST00000380392 POLA1P09884 1462 aaPredicted RBP38.13■■■■□ 3.69
C2CD4B-201ENST00000380392 TOP2BQ02880 1626 aa38.13■■■■□ 3.69
C2CD4B-201ENST00000380392 FGD5Q6ZNL6 1462 aa38.1■■■■□ 3.69
C2CD4B-201ENST00000380392 IFT140Q96RY7 1462 aa38.05■■■■□ 3.68
C2CD4B-201ENST00000380392 TARBP1Q13395 1621 aaKnown RBP38.03■■■■□ 3.68
C2CD4B-201ENST00000380392 RAD54L2Q9Y4B4 1467 aa37.93■■■■□ 3.66
C2CD4B-201ENST00000380392 SOGA1O94964 1423 aa37.91■■■■□ 3.66
C2CD4B-201ENST00000380392 WDR97A6NE52 1622 aa37.89■■■■□ 3.66
C2CD4B-201ENST00000380392 ZNF608Q9ULD9 1512 aaPredicted RBP37.85■■■■□ 3.65
C2CD4B-201ENST00000380392 EIF4G3O43432 1585 aaKnown RBP37.79■■■■□ 3.64
C2CD4B-201ENST00000380392 ABCA10Q8WWZ4 1543 aa37.75■■■■□ 3.63
C2CD4B-201ENST00000380392 AQRO60306 1485 aaKnown RBP eCLIP37.66■■■■□ 3.62
C2CD4B-201ENST00000380392 TDRD9Q8NDG6 1382 aaKnown RBP37.64■■■■□ 3.62
C2CD4B-201ENST00000380392 ABCA5Q8WWZ7 1642 aa37.63■■■■□ 3.62
C2CD4B-201ENST00000380392 PBRM1Q86U86 1689 aa37.54■■■■□ 3.6
C2CD4B-201ENST00000380392 GAPVD1Q14C86 1478 aa37.51■■■■□ 3.6
C2CD4B-201ENST00000380392 TRIM41Q8WV44 630 aa37.48■■■■□ 3.59
C2CD4B-201ENST00000380392 GRIN2BQ13224 1484 aa37.45■■■■□ 3.59
C2CD4B-201ENST00000380392 SNAPC4Q5SXM2 1469 aa37.36■■■■□ 3.57
C2CD4B-201ENST00000380392 CHIC1Q5VXU3 224 aa37.35■■■■□ 3.57
C2CD4B-201ENST00000380392 MAGI1Q96QZ7 1491 aaPredicted RBP37.33■■■■□ 3.57
C2CD4B-201ENST00000380392 KIF27Q86VH2 1401 aa37.33■■■■□ 3.57
C2CD4B-201ENST00000380392 ERICH3Q5RHP9 1530 aa37.32■■■■□ 3.56
C2CD4B-201ENST00000380392 CHD1O14646 1710 aa37.26■■■■□ 3.56
C2CD4B-201ENST00000380392 ADAMTS12P58397 1594 aa37.22■■■■□ 3.55
C2CD4B-201ENST00000380392 RUSC2Q8N2Y8 1516 aa37.18■■■■□ 3.54
C2CD4B-201ENST00000380392 SYNJ2O15056 1496 aa37.17■■■■□ 3.54
C2CD4B-201ENST00000380392 IGF1RP08069 1367 aa37.11■■■■□ 3.53
C2CD4B-201ENST00000380392 CUL7Q14999 1698 aa37.11■■■■□ 3.53
C2CD4B-201ENST00000380392 FHAD1B1AJZ9 1412 aa37.09■■■■□ 3.53
C2CD4B-201ENST00000380392 FBLN2P98095 1184 aa37.02■■■■□ 3.52
C2CD4B-201ENST00000380392 CHMP7Q8WUX9 453 aaPredicted RBP37.01■■■■□ 3.52
C2CD4B-201ENST00000380392 GRIN2AQ12879 1464 aa37■■■■□ 3.51
C2CD4B-201ENST00000380392 OSCARQ8IYS5 282 aa36.96■■■■□ 3.51
C2CD4B-201ENST00000380392 EEA1Q15075 1411 aa36.92■■■■□ 3.5
C2CD4B-201ENST00000380392 CARMIL1Q5VZK9 1371 aa36.89■■■■□ 3.5
C2CD4B-201ENST00000380392 CEP170Q5SW79 1584 aa36.84■■■■□ 3.49
C2CD4B-201ENST00000380392 CLASP1Q7Z460 1538 aa36.83■■■■□ 3.49
C2CD4B-201ENST00000380392 NUP160Q12769 1436 aa36.82■■■■□ 3.48
C2CD4B-201ENST00000380392 DNAJC5Q9H3Z4 198 aa36.8■■■■□ 3.48
C2CD4B-201ENST00000380392 PRXQ9BXM0 1461 aa36.77■■■■□ 3.48
C2CD4B-201ENST00000380392 RAPGEF2Q9Y4G8 1499 aa36.76■■■■□ 3.47
C2CD4B-201ENST00000380392 CSRNP3Q8WYN3 585 aa36.74■■■■□ 3.47
C2CD4B-201ENST00000380392 FAM9AQ8IZU1 332 aaPredicted RBP36.69■■■■□ 3.46
C2CD4B-201ENST00000380392 KIF21BO75037 1637 aa36.59■■■■□ 3.45
C2CD4B-201ENST00000380392 SHROOM2Q13796 1616 aa36.56■■■■□ 3.44
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms