RNA–Protein interactions for RNA: ENST00000534359.1

CHRNA10-204, Transcript of cholinergic receptor nicotinic alpha 10 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA10, Length 1,474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA10-204ENST00000534359 NISCHQ9Y2I1 1504 aa48.36■■■■■ 5.33
CHRNA10-204ENST00000534359 CCDC180Q9P1Z9 1646 aa42.46■■■■■ 4.39
CHRNA10-204ENST00000534359 ZCCHC6Q5VYS8 1495 aaKnown RBP40.54■■■■■ 4.08
CHRNA10-204ENST00000534359 ABCC9O60706 1549 aa40.23■■■■■ 4.03
CHRNA10-204ENST00000534359 DCAF1Q9Y4B6 1507 aa40.13■■■■■ 4.01
CHRNA10-204ENST00000534359 DCAF8L2P0C7V8 631 aa39.94■■■■□ 3.98
CHRNA10-204ENST00000534359 MYO15BQ96JP2 1530 aa39.84■■■■□ 3.97
CHRNA10-204ENST00000534359 NACADO15069 1562 aa39.63■■■■□ 3.94
CHRNA10-204ENST00000534359 RB1CC1Q8TDY2 1594 aa39.35■■■■□ 3.89
CHRNA10-204ENST00000534359 SHROOM4Q9ULL8 1493 aa38.95■■■■□ 3.83
CHRNA10-204ENST00000534359 SCRIBQ14160 1630 aa38.77■■■■□ 3.8
CHRNA10-204ENST00000534359 UNC13AQ9UPW8 1703 aa38.4■■■■□ 3.74
CHRNA10-204ENST00000534359 BICRAQ9NZM4 1560 aa38.01■■■■□ 3.68
CHRNA10-204ENST00000534359 PABPN1Q86U42 306 aaKnown RBP eCLIP37.82■■■■□ 3.64
CHRNA10-204ENST00000534359 CECR2Q9BXF3 1484 aa37.46■■■■□ 3.59
CHRNA10-204ENST00000534359 BAZ1AQ9NRL2 1556 aaPredicted RBP37.44■■■■□ 3.58
CHRNA10-204ENST00000534359 SUPT5HO00267 1087 aaKnown RBP37.39■■■■□ 3.58
CHRNA10-204ENST00000534359 RSF1Q96T23 1441 aaPredicted RBP37.33■■■■□ 3.57
CHRNA10-204ENST00000534359 MROH2BQ7Z745 1585 aa37.25■■■■□ 3.55
CHRNA10-204ENST00000534359 SMARCA4P51532 1647 aa37.24■■■■□ 3.55
CHRNA10-204ENST00000534359 EIF4G1Q04637 1599 aaKnown RBP36.95■■■■□ 3.51
CHRNA10-204ENST00000534359 WIZO95785 1651 aa36.92■■■■□ 3.5
CHRNA10-204ENST00000534359 PEG3Q9GZU2 1588 aa36.88■■■■□ 3.49
CHRNA10-204ENST00000534359 SMARCA2P51531 1590 aa36.79■■■■□ 3.48
CHRNA10-204ENST00000534359 ATAD2BQ9ULI0 1458 aa36.72■■■■□ 3.47
CHRNA10-204ENST00000534359 TOP2AP11388 1531 aaKnown RBP36.64■■■■□ 3.46
CHRNA10-204ENST00000534359 NCAPD3P42695 1498 aa36.53■■■■□ 3.44
CHRNA10-204ENST00000534359 BAZ1BQ9UIG0 1483 aaKnown RBP36.52■■■■□ 3.44
CHRNA10-204ENST00000534359 CC2D2AQ9P2K1 1620 aa36.48■■■■□ 3.43
CHRNA10-204ENST00000534359 HMGXB3Q12766 1538 aa36.47■■■■□ 3.43
CHRNA10-204ENST00000534359 CCDC88BA6NC98 1476 aa36.19■■■■□ 3.38
CHRNA10-204ENST00000534359 DNAJC5BQ9UF47 199 aa35.69■■■■□ 3.3
CHRNA10-204ENST00000534359 CHIC1Q5VXU3 224 aa35.66■■■■□ 3.3
CHRNA10-204ENST00000534359 CFTRP13569 1480 aa35.59■■■■□ 3.29
CHRNA10-204ENST00000534359 CADPSQ9ULU8 1353 aa35.55■■■■□ 3.28
CHRNA10-204ENST00000534359 PRDM2Q13029 1718 aa35.45■■■■□ 3.26
CHRNA10-204ENST00000534359 LAMC3Q9Y6N6 1575 aa35.38■■■■□ 3.25
CHRNA10-204ENST00000534359 TRIM41Q8WV44 630 aa35.32■■■■□ 3.24
CHRNA10-204ENST00000534359 ABCC8Q09428 1581 aa35.22■■■■□ 3.23
CHRNA10-204ENST00000534359 WRNQ14191 1432 aaPredicted RBP eCLIP35.2■■■■□ 3.23
CHRNA10-204ENST00000534359 NESP48681 1621 aa35.16■■■■□ 3.22
CHRNA10-204ENST00000534359 PDS5BQ9NTI5 1447 aa35.13■■■■□ 3.21
CHRNA10-204ENST00000534359 FANCD2Q9BXW9 1451 aa35.12■■■■□ 3.21
CHRNA10-204ENST00000534359 TOP2BQ02880 1626 aa34.97■■■■□ 3.19
CHRNA10-204ENST00000534359 CEP164Q9UPV0 1460 aa34.97■■■■□ 3.19
CHRNA10-204ENST00000534359 SYNJ1O43426 1573 aa34.96■■■■□ 3.19
CHRNA10-204ENST00000534359 BIVM-ERCC5R4GMW8 1640 aa34.94■■■■□ 3.18
CHRNA10-204ENST00000534359 CUX1P39880 1505 aa34.87■■■■□ 3.17
CHRNA10-204ENST00000534359 KIF21AQ7Z4S6 1674 aa34.82■■■■□ 3.16
CHRNA10-204ENST00000534359 DNMBPQ6XZF7 1577 aa34.78■■■■□ 3.16
CHRNA10-204ENST00000534359 TOPBP1Q92547 1522 aa34.68■■■■□ 3.14
CHRNA10-204ENST00000534359 EEA1Q15075 1411 aa34.65■■■■□ 3.14
CHRNA10-204ENST00000534359 ERCC6Q03468 1493 aa34.65■■■■□ 3.14
CHRNA10-204ENST00000534359 MRC2Q9UBG0 1479 aa34.63■■■■□ 3.13
CHRNA10-204ENST00000534359 URB2Q14146 1524 aaKnown RBP34.63■■■■□ 3.13
CHRNA10-204ENST00000534359 FGD5Q6ZNL6 1462 aa34.57■■■■□ 3.13
CHRNA10-204ENST00000534359 SOGA1O94964 1423 aa34.51■■■■□ 3.11
CHRNA10-204ENST00000534359 FAM9AQ8IZU1 332 aaPredicted RBP34.47■■■■□ 3.11
CHRNA10-204ENST00000534359 POLA1P09884 1462 aaPredicted RBP34.47■■■■□ 3.11
CHRNA10-204ENST00000534359 WDR62O43379 1518 aa34.45■■■■□ 3.11
CHRNA10-204ENST00000534359 KIF27Q86VH2 1401 aa34.4■■■■□ 3.1
CHRNA10-204ENST00000534359 THOC2Q8NI27 1593 aaKnown RBP34.37■■■■□ 3.09
CHRNA10-204ENST00000534359 CSRNP3Q8WYN3 585 aa34.37■■■■□ 3.09
CHRNA10-204ENST00000534359 RUSC2Q8N2Y8 1516 aa34.34■■■■□ 3.09
CHRNA10-204ENST00000534359 ABCA10Q8WWZ4 1543 aa34.34■■■■□ 3.09
CHRNA10-204ENST00000534359 CUX2O14529 1486 aa34.29■■■■□ 3.08
CHRNA10-204ENST00000534359 RAD54L2Q9Y4B4 1467 aa34.27■■■■□ 3.08
CHRNA10-204ENST00000534359 WDR97A6NE52 1622 aa34.2■■■■□ 3.07
CHRNA10-204ENST00000534359 IFT140Q96RY7 1462 aa34.19■■■■□ 3.06
CHRNA10-204ENST00000534359 TARBP1Q13395 1621 aaKnown RBP34.19■■■■□ 3.06
CHRNA10-204ENST00000534359 LOC105371045A0A1W2PR82 267 aa34.15■■■■□ 3.06
CHRNA10-204ENST00000534359 KIF21BO75037 1637 aa34.11■■■■□ 3.05
CHRNA10-204ENST00000534359 IGF1RP08069 1367 aa34.05■■■■□ 3.04
CHRNA10-204ENST00000534359 ABCA5Q8WWZ7 1642 aa34.04■■■■□ 3.04
CHRNA10-204ENST00000534359 GOLGA3Q08378 1498 aa34.03■■■■□ 3.04
CHRNA10-204ENST00000534359 GAPVD1Q14C86 1478 aa34.03■■■■□ 3.04
CHRNA10-204ENST00000534359 PRXQ9BXM0 1461 aa34.01■■■■□ 3.03
CHRNA10-204ENST00000534359 TDRD9Q8NDG6 1382 aaKnown RBP34■■■■□ 3.03
CHRNA10-204ENST00000534359 ERICH3Q5RHP9 1530 aa33.99■■■■□ 3.03
CHRNA10-204ENST00000534359 CUL7Q14999 1698 aa33.93■■■■□ 3.02
CHRNA10-204ENST00000534359 CARMIL1Q5VZK9 1371 aa33.91■■■■□ 3.02
CHRNA10-204ENST00000534359 TNIKQ9UKE5 1360 aa33.87■■■■□ 3.01
CHRNA10-204ENST00000534359 UBTFP17480 764 aaKnown RBP33.87■■■■□ 3.01
CHRNA10-204ENST00000534359 EHMT2Q96KQ7 1210 aa33.87■■■■□ 3.01
CHRNA10-204ENST00000534359 RAPGEF2Q9Y4G8 1499 aa33.86■■■■□ 3.01
CHRNA10-204ENST00000534359 AQRO60306 1485 aaKnown RBP eCLIP33.84■■■■□ 3.01
CHRNA10-204ENST00000534359 GRIN2BQ13224 1484 aa33.84■■■■□ 3.01
CHRNA10-204ENST00000534359 PBRM1Q86U86 1689 aa33.83■■■■□ 3.01
CHRNA10-204ENST00000534359 ZNF608Q9ULD9 1512 aaPredicted RBP33.83■■■■□ 3.01
CHRNA10-204ENST00000534359 EIF4G3O43432 1585 aaKnown RBP33.78■■■■□ 3
CHRNA10-204ENST00000534359 FHAD1B1AJZ9 1412 aa33.69■■■□□ 2.98
CHRNA10-204ENST00000534359 MAGI1Q96QZ7 1491 aaPredicted RBP33.63■■■□□ 2.97
CHRNA10-204ENST00000534359 ADAMTS12P58397 1594 aa33.62■■■□□ 2.97
CHRNA10-204ENST00000534359 CEP162Q5TB80 1403 aa33.58■■■□□ 2.97
CHRNA10-204ENST00000534359 SNAPC4Q5SXM2 1469 aa33.56■■■□□ 2.96
CHRNA10-204ENST00000534359 SYNJ2O15056 1496 aa33.47■■■□□ 2.95
CHRNA10-204ENST00000534359 CLIP1P30622 1438 aa33.44■■■□□ 2.94
CHRNA10-204ENST00000534359 CTTNBP2Q8WZ74 1663 aa33.44■■■□□ 2.94
CHRNA10-204ENST00000534359 CHMP7Q8WUX9 453 aaPredicted RBP33.39■■■□□ 2.94
CHRNA10-204ENST00000534359 GRIN2AQ12879 1464 aa33.38■■■□□ 2.93
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms