RNA–Protein interactions for RNA: ENST00000244546.4

PEX6-201, Transcript of peroxisomal biogenesis factor 6, humanhuman

TSL 1 (best) BASIC

Gene PEX6, Length 2,696 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEX6-201ENST00000244546 NISCHQ9Y2I1 1504 aa41.78■■■■■ 4.28
PEX6-201ENST00000244546 CCDC180Q9P1Z9 1646 aa35.64■■■■□ 3.3
PEX6-201ENST00000244546 SHROOM4Q9ULL8 1493 aa35.61■■■■□ 3.29
PEX6-201ENST00000244546 DCAF8L2P0C7V8 631 aa35.6■■■■□ 3.29
PEX6-201ENST00000244546 ZCCHC6Q5VYS8 1495 aaKnown RBP35.12■■■■□ 3.21
PEX6-201ENST00000244546 SUPT5HO00267 1087 aaKnown RBP34.51■■■■□ 3.11
PEX6-201ENST00000244546 ABCC9O60706 1549 aa34.33■■■■□ 3.09
PEX6-201ENST00000244546 HRCP23327 699 aa34.16■■■■□ 3.06
PEX6-201ENST00000244546 DCAF1Q9Y4B6 1507 aa33.99■■■■□ 3.03
PEX6-201ENST00000244546 SCRIBQ14160 1630 aa33.73■■■□□ 2.99
PEX6-201ENST00000244546 PPARGC1BQ86YN6 1023 aaKnown RBP33.61■■■□□ 2.97
PEX6-201ENST00000244546 PCGF6Q9BYE7 350 aa33.44■■■□□ 2.94
PEX6-201ENST00000244546 NACADO15069 1562 aa33.26■■■□□ 2.92
PEX6-201ENST00000244546 MYO15BQ96JP2 1530 aa33.25■■■□□ 2.91
PEX6-201ENST00000244546 PELP1Q8IZL8 1130 aaKnown RBP33.12■■■□□ 2.89
PEX6-201ENST00000244546 RB1CC1Q8TDY2 1594 aa32.98■■■□□ 2.87
PEX6-201ENST00000244546 CHIC1Q5VXU3 224 aa32.96■■■□□ 2.87
PEX6-201ENST00000244546 CECR2Q9BXF3 1484 aa32.88■■■□□ 2.85
PEX6-201ENST00000244546 RSF1Q96T23 1441 aaPredicted RBP32.85■■■□□ 2.85
PEX6-201ENST00000244546 PABPN1Q86U42 306 aaKnown RBP eCLIP32.85■■■□□ 2.85
PEX6-201ENST00000244546 MROH2BQ7Z745 1585 aa32.58■■■□□ 2.81
PEX6-201ENST00000244546 SCAF1Q9H7N4 1312 aaKnown RBP32.53■■■□□ 2.8
PEX6-201ENST00000244546 UNC13AQ9UPW8 1703 aa32.5■■■□□ 2.79
PEX6-201ENST00000244546 WIZO95785 1651 aa32.37■■■□□ 2.77
PEX6-201ENST00000244546 LOC105371045A0A1W2PR82 267 aa32.31■■■□□ 2.76
PEX6-201ENST00000244546 BICRAQ9NZM4 1560 aa32.18■■■□□ 2.74
PEX6-201ENST00000244546 TRIM26Q12899 539 aaPredicted RBP32.17■■■□□ 2.74
PEX6-201ENST00000244546 BAZ1AQ9NRL2 1556 aaPredicted RBP32.1■■■□□ 2.73
PEX6-201ENST00000244546 EHMT2Q96KQ7 1210 aa32.03■■■□□ 2.72
PEX6-201ENST00000244546 FAM9AQ8IZU1 332 aaPredicted RBP32.02■■■□□ 2.72
PEX6-201ENST00000244546 TRIM41Q8WV44 630 aa32.02■■■□□ 2.72
PEX6-201ENST00000244546 SMARCA4P51532 1647 aa31.98■■■□□ 2.71
PEX6-201ENST00000244546 ZEB1P37275 1124 aaPredicted RBP31.88■■■□□ 2.69
PEX6-201ENST00000244546 MYT1Q01538 1121 aa31.82■■■□□ 2.68
PEX6-201ENST00000244546 CCDC88BA6NC98 1476 aa31.68■■■□□ 2.66
PEX6-201ENST00000244546 TOP2AP11388 1531 aaKnown RBP31.65■■■□□ 2.66
PEX6-201ENST00000244546 ACIN1Q9UKV3 1341 aaKnown RBP31.58■■■□□ 2.65
PEX6-201ENST00000244546 NEUROD1Q13562 356 aa31.56■■■□□ 2.64
PEX6-201ENST00000244546 SMARCA2P51531 1590 aa31.52■■■□□ 2.64
PEX6-201ENST00000244546 ABCC8Q09428 1581 aa31.45■■■□□ 2.63
PEX6-201ENST00000244546 ATAD2BQ9ULI0 1458 aa31.44■■■□□ 2.62
PEX6-201ENST00000244546 GTF3C3Q9Y5Q9 886 aa31.4■■■□□ 2.62
PEX6-201ENST00000244546 BAZ1BQ9UIG0 1483 aaKnown RBP31.34■■■□□ 2.61
PEX6-201ENST00000244546 EIF4G1Q04637 1599 aaKnown RBP31.28■■■□□ 2.6
PEX6-201ENST00000244546 PEG3Q9GZU2 1588 aa31.21■■■□□ 2.59
PEX6-201ENST00000244546 CENPBP07199 599 aaPredicted RBP31.07■■■□□ 2.56
PEX6-201ENST00000244546 SOGA1O94964 1423 aa31.01■■■□□ 2.55
PEX6-201ENST00000244546 RUSC2Q8N2Y8 1516 aa30.94■■■□□ 2.54
PEX6-201ENST00000244546 DIEXFQ68CQ4 756 aaKnown RBP30.93■■■□□ 2.54
PEX6-201ENST00000244546 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.92■■■□□ 2.54
PEX6-201ENST00000244546 WRNQ14191 1432 aaPredicted RBP eCLIP30.9■■■□□ 2.54
PEX6-201ENST00000244546 NCAPD3P42695 1498 aa30.87■■■□□ 2.53
PEX6-201ENST00000244546 CCER1Q8TC90 406 aaPredicted RBP30.8■■■□□ 2.52
PEX6-201ENST00000244546 SYNJ1O43426 1573 aa30.76■■■□□ 2.52
PEX6-201ENST00000244546 UBTFP17480 764 aaKnown RBP30.7■■■□□ 2.51
PEX6-201ENST00000244546 CC2D2AQ9P2K1 1620 aa30.7■■■□□ 2.51
PEX6-201ENST00000244546 TTBK1Q5TCY1 1321 aaPredicted RBP30.7■■■□□ 2.5
PEX6-201ENST00000244546 HMGXB3Q12766 1538 aa30.7■■■□□ 2.5
PEX6-201ENST00000244546 CSRNP3Q8WYN3 585 aa30.7■■■□□ 2.5
PEX6-201ENST00000244546 RANGAP1P46060 587 aaPredicted RBP30.67■■■□□ 2.5
PEX6-201ENST00000244546 DNAJC5BQ9UF47 199 aa30.65■■■□□ 2.5
PEX6-201ENST00000244546 YTHDC1Q96MU7 727 aaKnown RBP30.58■■■□□ 2.49
PEX6-201ENST00000244546 CFTRP13569 1480 aa30.43■■■□□ 2.46
PEX6-201ENST00000244546 CEP162Q5TB80 1403 aa30.36■■■□□ 2.45
PEX6-201ENST00000244546 CADPSQ9ULU8 1353 aa30.35■■■□□ 2.45
PEX6-201ENST00000244546 CUX1P39880 1505 aa30.35■■■□□ 2.45
PEX6-201ENST00000244546 NESP48681 1621 aa30.32■■■□□ 2.44
PEX6-201ENST00000244546 TOP2BQ02880 1626 aa30.31■■■□□ 2.44
PEX6-201ENST00000244546 EEA1Q15075 1411 aa30.29■■■□□ 2.44
PEX6-201ENST00000244546 TNIKQ9UKE5 1360 aa30.24■■■□□ 2.43
PEX6-201ENST00000244546 ZNF316A6NFI3 1004 aaPredicted RBP30.23■■■□□ 2.43
PEX6-201ENST00000244546 GOLGA3Q08378 1498 aa30.22■■■□□ 2.43
PEX6-201ENST00000244546 RAPGEF2Q9Y4G8 1499 aa30.22■■■□□ 2.43
PEX6-201ENST00000244546 MIER1Q8N108 512 aa30.17■■■□□ 2.42
PEX6-201ENST00000244546 BIVM-ERCC5R4GMW8 1640 aa30.13■■■□□ 2.41
PEX6-201ENST00000244546 CEP164Q9UPV0 1460 aa30.12■■■□□ 2.41
PEX6-201ENST00000244546 FANCD2Q9BXW9 1451 aa30.08■■■□□ 2.41
PEX6-201ENST00000244546 BCL11AQ9H165 835 aa30.03■■■□□ 2.4
PEX6-201ENST00000244546 CUX2O14529 1486 aa29.99■■■□□ 2.39
PEX6-201ENST00000244546 CLIP1P30622 1438 aa29.98■■■□□ 2.39
PEX6-201ENST00000244546 KIF27Q86VH2 1401 aa29.98■■■□□ 2.39
PEX6-201ENST00000244546 FGD5Q6ZNL6 1462 aa29.97■■■□□ 2.39
PEX6-201ENST00000244546 KIF21BO75037 1637 aa29.95■■■□□ 2.39
PEX6-201ENST00000244546 RAD54L2Q9Y4B4 1467 aa29.92■■■□□ 2.38
PEX6-201ENST00000244546 PRDM2Q13029 1718 aa29.89■■■□□ 2.37
PEX6-201ENST00000244546 ANP32EQ9BTT0 268 aa29.87■■■□□ 2.37
PEX6-201ENST00000244546 PRXQ9BXM0 1461 aa29.84■■■□□ 2.37
PEX6-201ENST00000244546 IGF1RP08069 1367 aa29.81■■■□□ 2.36
PEX6-201ENST00000244546 SUPT16HQ9Y5B9 1047 aaKnown RBP29.8■■■□□ 2.36
PEX6-201ENST00000244546 TOPBP1Q92547 1522 aa29.75■■■□□ 2.35
PEX6-201ENST00000244546 TSHZ2Q9NRE2 1034 aa29.74■■■□□ 2.35
PEX6-201ENST00000244546 POLA1P09884 1462 aaPredicted RBP29.72■■■□□ 2.35
PEX6-201ENST00000244546 P3H3Q8IVL6 736 aa29.71■■■□□ 2.35
PEX6-201ENST00000244546 APLP2Q06481 763 aa29.7■■■□□ 2.34
PEX6-201ENST00000244546 URB2Q14146 1524 aaKnown RBP29.7■■■□□ 2.34
PEX6-201ENST00000244546 TDRD9Q8NDG6 1382 aaKnown RBP29.69■■■□□ 2.34
PEX6-201ENST00000244546 CARMIL1Q5VZK9 1371 aa29.68■■■□□ 2.34
PEX6-201ENST00000244546 DNMBPQ6XZF7 1577 aa29.63■■■□□ 2.33
PEX6-201ENST00000244546 LAMC3Q9Y6N6 1575 aa29.63■■■□□ 2.33
PEX6-201ENST00000244546 VPS8Q8N3P4 1428 aa29.63■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms