RNA–Protein interactions for RNA: ENST00000308064.6

CHST1-201, Transcript of carbohydrate sulfotransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHST1, Length 2,718 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHST1-201ENST00000308064 NISCHQ9Y2I1 1504 aa42.23■■■■■ 4.35
CHST1-201ENST00000308064 SHROOM4Q9ULL8 1493 aa36.06■■■■□ 3.36
CHST1-201ENST00000308064 CCDC180Q9P1Z9 1646 aa35.89■■■■□ 3.34
CHST1-201ENST00000308064 ZCCHC6Q5VYS8 1495 aaKnown RBP35.73■■■■□ 3.31
CHST1-201ENST00000308064 SUPT5HO00267 1087 aaKnown RBP35.28■■■■□ 3.24
CHST1-201ENST00000308064 DCAF8L2P0C7V8 631 aa35.06■■■■□ 3.2
CHST1-201ENST00000308064 DCAF1Q9Y4B6 1507 aa34.58■■■■□ 3.13
CHST1-201ENST00000308064 CHIC1Q5VXU3 224 aa34.25■■■■□ 3.07
CHST1-201ENST00000308064 MYO15BQ96JP2 1530 aa34.21■■■■□ 3.07
CHST1-201ENST00000308064 SCRIBQ14160 1630 aa33.73■■■□□ 2.99
CHST1-201ENST00000308064 ABCC9O60706 1549 aa33.71■■■□□ 2.99
CHST1-201ENST00000308064 RSF1Q96T23 1441 aaPredicted RBP33.43■■■□□ 2.94
CHST1-201ENST00000308064 LOC105371045A0A1W2PR82 267 aa33.3■■■□□ 2.92
CHST1-201ENST00000308064 NACADO15069 1562 aa33.18■■■□□ 2.9
CHST1-201ENST00000308064 PCGF6Q9BYE7 350 aa33.13■■■□□ 2.89
CHST1-201ENST00000308064 RB1CC1Q8TDY2 1594 aa33.12■■■□□ 2.89
CHST1-201ENST00000308064 HRCP23327 699 aa33.05■■■□□ 2.88
CHST1-201ENST00000308064 CECR2Q9BXF3 1484 aa33.03■■■□□ 2.88
CHST1-201ENST00000308064 MROH2BQ7Z745 1585 aa32.89■■■□□ 2.86
CHST1-201ENST00000308064 TRIM41Q8WV44 630 aa32.8■■■□□ 2.84
CHST1-201ENST00000308064 WIZO95785 1651 aa32.72■■■□□ 2.83
CHST1-201ENST00000308064 FAM9AQ8IZU1 332 aaPredicted RBP32.62■■■□□ 2.81
CHST1-201ENST00000308064 PPARGC1BQ86YN6 1023 aaKnown RBP32.5■■■□□ 2.79
CHST1-201ENST00000308064 BAZ1AQ9NRL2 1556 aaPredicted RBP32.45■■■□□ 2.78
CHST1-201ENST00000308064 TRIM26Q12899 539 aaPredicted RBP32.44■■■□□ 2.78
CHST1-201ENST00000308064 EHMT2Q96KQ7 1210 aa32.41■■■□□ 2.78
CHST1-201ENST00000308064 UNC13AQ9UPW8 1703 aa32.3■■■□□ 2.76
CHST1-201ENST00000308064 EIF4G1Q04637 1599 aaKnown RBP32.26■■■□□ 2.75
CHST1-201ENST00000308064 SMARCA4P51532 1647 aa32.2■■■□□ 2.74
CHST1-201ENST00000308064 TOP2AP11388 1531 aaKnown RBP32.14■■■□□ 2.73
CHST1-201ENST00000308064 CCDC88BA6NC98 1476 aa32.03■■■□□ 2.72
CHST1-201ENST00000308064 SMARCA2P51531 1590 aa32■■■□□ 2.71
CHST1-201ENST00000308064 ABCC8Q09428 1581 aa31.99■■■□□ 2.71
CHST1-201ENST00000308064 PABPN1Q86U42 306 aaKnown RBP eCLIP31.95■■■□□ 2.71
CHST1-201ENST00000308064 BICRAQ9NZM4 1560 aa31.89■■■□□ 2.7
CHST1-201ENST00000308064 SOGA1O94964 1423 aa31.65■■■□□ 2.66
CHST1-201ENST00000308064 ZEB1P37275 1124 aaPredicted RBP31.59■■■□□ 2.65
CHST1-201ENST00000308064 PEG3Q9GZU2 1588 aa31.54■■■□□ 2.64
CHST1-201ENST00000308064 RUSC2Q8N2Y8 1516 aa31.54■■■□□ 2.64
CHST1-201ENST00000308064 CEP162Q5TB80 1403 aa31.44■■■□□ 2.62
CHST1-201ENST00000308064 ATAD2BQ9ULI0 1458 aa31.38■■■□□ 2.61
CHST1-201ENST00000308064 CSRNP3Q8WYN3 585 aa31.38■■■□□ 2.61
CHST1-201ENST00000308064 WRNQ14191 1432 aaPredicted RBP eCLIP31.37■■■□□ 2.61
CHST1-201ENST00000308064 TNIKQ9UKE5 1360 aa31.34■■■□□ 2.61
CHST1-201ENST00000308064 TTBK1Q5TCY1 1321 aaPredicted RBP31.34■■■□□ 2.61
CHST1-201ENST00000308064 EEA1Q15075 1411 aa31.33■■■□□ 2.61
CHST1-201ENST00000308064 SYNJ1O43426 1573 aa31.29■■■□□ 2.6
CHST1-201ENST00000308064 BAZ1BQ9UIG0 1483 aaKnown RBP31.27■■■□□ 2.6
CHST1-201ENST00000308064 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.26■■■□□ 2.6
CHST1-201ENST00000308064 UBTFP17480 764 aaKnown RBP31.26■■■□□ 2.59
CHST1-201ENST00000308064 GOLGA3Q08378 1498 aa31.18■■■□□ 2.58
CHST1-201ENST00000308064 CCER1Q8TC90 406 aaPredicted RBP31.09■■■□□ 2.57
CHST1-201ENST00000308064 CEP164Q9UPV0 1460 aa31■■■□□ 2.55
CHST1-201ENST00000308064 KIF21BO75037 1637 aa30.98■■■□□ 2.55
CHST1-201ENST00000308064 RAPGEF2Q9Y4G8 1499 aa30.88■■■□□ 2.53
CHST1-201ENST00000308064 CLIP1P30622 1438 aa30.85■■■□□ 2.53
CHST1-201ENST00000308064 TOP2BQ02880 1626 aa30.84■■■□□ 2.53
CHST1-201ENST00000308064 RANGAP1P46060 587 aaPredicted RBP30.75■■■□□ 2.51
CHST1-201ENST00000308064 NCAPD3P42695 1498 aa30.74■■■□□ 2.51
CHST1-201ENST00000308064 BIVM-ERCC5R4GMW8 1640 aa30.73■■■□□ 2.51
CHST1-201ENST00000308064 HMGXB3Q12766 1538 aa30.72■■■□□ 2.51
CHST1-201ENST00000308064 VPS8Q8N3P4 1428 aa30.69■■■□□ 2.5
CHST1-201ENST00000308064 CUX1P39880 1505 aa30.61■■■□□ 2.49
CHST1-201ENST00000308064 HNRNPUL2Q1KMD3 747 aaKnown RBP30.58■■■□□ 2.49
CHST1-201ENST00000308064 PRXQ9BXM0 1461 aa30.54■■■□□ 2.48
CHST1-201ENST00000308064 CFTRP13569 1480 aa30.5■■■□□ 2.47
CHST1-201ENST00000308064 ERICH3Q5RHP9 1530 aa30.48■■■□□ 2.47
CHST1-201ENST00000308064 APLP2Q06481 763 aa30.46■■■□□ 2.47
CHST1-201ENST00000308064 SCAF1Q9H7N4 1312 aaKnown RBP30.45■■■□□ 2.47
CHST1-201ENST00000308064 DIEXFQ68CQ4 756 aaKnown RBP30.44■■■□□ 2.46
CHST1-201ENST00000308064 ARAP1Q96P48 1450 aa30.41■■■□□ 2.46
CHST1-201ENST00000308064 KIF27Q86VH2 1401 aa30.37■■■□□ 2.45
CHST1-201ENST00000308064 KANK4Q5T7N3 995 aaPredicted RBP30.25■■■□□ 2.43
CHST1-201ENST00000308064 PRDM2Q13029 1718 aa30.23■■■□□ 2.43
CHST1-201ENST00000308064 ZNF316A6NFI3 1004 aaPredicted RBP30.22■■■□□ 2.43
CHST1-201ENST00000308064 NEUROD1Q13562 356 aa30.17■■■□□ 2.42
CHST1-201ENST00000308064 CADPSQ9ULU8 1353 aa30.16■■■□□ 2.42
CHST1-201ENST00000308064 CUX2O14529 1486 aa30.15■■■□□ 2.42
CHST1-201ENST00000308064 ARHGAP35Q9NRY4 1499 aa30.15■■■□□ 2.42
CHST1-201ENST00000308064 ACIN1Q9UKV3 1341 aaKnown RBP30.13■■■□□ 2.41
CHST1-201ENST00000308064 IGF1RP08069 1367 aa30.1■■■□□ 2.41
CHST1-201ENST00000308064 FGD5Q6ZNL6 1462 aa30.06■■■□□ 2.4
CHST1-201ENST00000308064 CC2D2AQ9P2K1 1620 aa30.05■■■□□ 2.4
CHST1-201ENST00000308064 RRBP1Q9P2E9 1410 aaKnown RBP29.97■■■□□ 2.39
CHST1-201ENST00000308064 DHX57Q6P158 1386 aaKnown RBP29.96■■■□□ 2.39
CHST1-201ENST00000308064 CARMIL1Q5VZK9 1371 aa29.95■■■□□ 2.38
CHST1-201ENST00000308064 FANCD2Q9BXW9 1451 aa29.9■■■□□ 2.38
CHST1-201ENST00000308064 CENPBP07199 599 aaPredicted RBP29.88■■■□□ 2.37
CHST1-201ENST00000308064 MIER1Q8N108 512 aa29.86■■■□□ 2.37
CHST1-201ENST00000308064 CCNB3Q8WWL7 1395 aa29.85■■■□□ 2.37
CHST1-201ENST00000308064 GTF3C3Q9Y5Q9 886 aa29.81■■■□□ 2.36
CHST1-201ENST00000308064 ITGAEP38570 1179 aa29.8■■■□□ 2.36
CHST1-201ENST00000308064 RAD54L2Q9Y4B4 1467 aa29.8■■■□□ 2.36
CHST1-201ENST00000308064 NESP48681 1621 aa29.79■■■□□ 2.36
CHST1-201ENST00000308064 YTHDC1Q96MU7 727 aaKnown RBP29.78■■■□□ 2.36
CHST1-201ENST00000308064 TIAM1Q13009 1591 aa29.78■■■□□ 2.36
CHST1-201ENST00000308064 CLSPNQ9HAW4 1339 aa29.78■■■□□ 2.36
CHST1-201ENST00000308064 P3H3Q8IVL6 736 aa29.73■■■□□ 2.35
CHST1-201ENST00000308064 DNMBPQ6XZF7 1577 aa29.73■■■□□ 2.35
CHST1-201ENST00000308064 POLA1P09884 1462 aaPredicted RBP29.71■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms