RNA–Protein interactions for RNA: ENST00000640958.1

SP3-208, Transcript of Sp3 transcription factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SP3, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP3-208ENST00000640958 NISCHQ9Y2I1 1504 aa44.87■■■■■ 4.77
SP3-208ENST00000640958 CCDC180Q9P1Z9 1646 aa38.82■■■■□ 3.8
SP3-208ENST00000640958 ZCCHC6Q5VYS8 1495 aaKnown RBP37.85■■■■□ 3.65
SP3-208ENST00000640958 SHROOM4Q9ULL8 1493 aa37.13■■■■□ 3.53
SP3-208ENST00000640958 DCAF1Q9Y4B6 1507 aa37.06■■■■□ 3.52
SP3-208ENST00000640958 DCAF8L2P0C7V8 631 aa36.8■■■■□ 3.48
SP3-208ENST00000640958 MYO15BQ96JP2 1530 aa36.34■■■■□ 3.41
SP3-208ENST00000640958 ABCC9O60706 1549 aa36.17■■■■□ 3.38
SP3-208ENST00000640958 SUPT5HO00267 1087 aaKnown RBP35.99■■■■□ 3.35
SP3-208ENST00000640958 NACADO15069 1562 aa35.96■■■■□ 3.35
SP3-208ENST00000640958 SCRIBQ14160 1630 aa35.87■■■■□ 3.33
SP3-208ENST00000640958 RB1CC1Q8TDY2 1594 aa35.51■■■■□ 3.27
SP3-208ENST00000640958 RSF1Q96T23 1441 aaPredicted RBP35.07■■■■□ 3.2
SP3-208ENST00000640958 UNC13AQ9UPW8 1703 aa34.99■■■■□ 3.19
SP3-208ENST00000640958 CECR2Q9BXF3 1484 aa34.87■■■■□ 3.17
SP3-208ENST00000640958 CHIC1Q5VXU3 224 aa34.8■■■■□ 3.16
SP3-208ENST00000640958 MROH2BQ7Z745 1585 aa34.74■■■■□ 3.15
SP3-208ENST00000640958 BAZ1AQ9NRL2 1556 aaPredicted RBP34.58■■■■□ 3.13
SP3-208ENST00000640958 BICRAQ9NZM4 1560 aa34.52■■■■□ 3.12
SP3-208ENST00000640958 WIZO95785 1651 aa34.52■■■■□ 3.12
SP3-208ENST00000640958 SMARCA4P51532 1647 aa34.39■■■■□ 3.1
SP3-208ENST00000640958 PABPN1Q86U42 306 aaKnown RBP eCLIP34.22■■■■□ 3.07
SP3-208ENST00000640958 TOP2AP11388 1531 aaKnown RBP34.12■■■■□ 3.05
SP3-208ENST00000640958 PEG3Q9GZU2 1588 aa33.91■■■■□ 3.02
SP3-208ENST00000640958 EIF4G1Q04637 1599 aaKnown RBP33.91■■■■□ 3.02
SP3-208ENST00000640958 SMARCA2P51531 1590 aa33.85■■■■□ 3.01
SP3-208ENST00000640958 CCDC88BA6NC98 1476 aa33.78■■■■□ 3
SP3-208ENST00000640958 TRIM41Q8WV44 630 aa33.73■■■□□ 2.99
SP3-208ENST00000640958 ATAD2BQ9ULI0 1458 aa33.63■■■□□ 2.97
SP3-208ENST00000640958 LOC105371045A0A1W2PR82 267 aa33.52■■■□□ 2.96
SP3-208ENST00000640958 BAZ1BQ9UIG0 1483 aaKnown RBP33.46■■■□□ 2.95
SP3-208ENST00000640958 ABCC8Q09428 1581 aa33.35■■■□□ 2.93
SP3-208ENST00000640958 HMGXB3Q12766 1538 aa33.23■■■□□ 2.91
SP3-208ENST00000640958 FAM9AQ8IZU1 332 aaPredicted RBP33.21■■■□□ 2.91
SP3-208ENST00000640958 NCAPD3P42695 1498 aa33.18■■■□□ 2.9
SP3-208ENST00000640958 WRNQ14191 1432 aaPredicted RBP eCLIP32.97■■■□□ 2.87
SP3-208ENST00000640958 SYNJ1O43426 1573 aa32.89■■■□□ 2.86
SP3-208ENST00000640958 SOGA1O94964 1423 aa32.82■■■□□ 2.84
SP3-208ENST00000640958 EEA1Q15075 1411 aa32.78■■■□□ 2.84
SP3-208ENST00000640958 EHMT2Q96KQ7 1210 aa32.76■■■□□ 2.83
SP3-208ENST00000640958 CC2D2AQ9P2K1 1620 aa32.75■■■□□ 2.83
SP3-208ENST00000640958 RUSC2Q8N2Y8 1516 aa32.7■■■□□ 2.82
SP3-208ENST00000640958 TOP2BQ02880 1626 aa32.66■■■□□ 2.82
SP3-208ENST00000640958 CFTRP13569 1480 aa32.65■■■□□ 2.82
SP3-208ENST00000640958 PCGF6Q9BYE7 350 aa32.65■■■□□ 2.82
SP3-208ENST00000640958 BIVM-ERCC5R4GMW8 1640 aa32.63■■■□□ 2.81
SP3-208ENST00000640958 PRDM2Q13029 1718 aa32.61■■■□□ 2.81
SP3-208ENST00000640958 CSRNP3Q8WYN3 585 aa32.56■■■□□ 2.8
SP3-208ENST00000640958 CUX1P39880 1505 aa32.44■■■□□ 2.78
SP3-208ENST00000640958 TRIM26Q12899 539 aaPredicted RBP32.43■■■□□ 2.78
SP3-208ENST00000640958 TNIKQ9UKE5 1360 aa32.42■■■□□ 2.78
SP3-208ENST00000640958 GOLGA3Q08378 1498 aa32.42■■■□□ 2.78
SP3-208ENST00000640958 KIF21BO75037 1637 aa32.42■■■□□ 2.78
SP3-208ENST00000640958 CADPSQ9ULU8 1353 aa32.38■■■□□ 2.77
SP3-208ENST00000640958 CEP162Q5TB80 1403 aa32.35■■■□□ 2.77
SP3-208ENST00000640958 CEP164Q9UPV0 1460 aa32.35■■■□□ 2.77
SP3-208ENST00000640958 HRCP23327 699 aa32.24■■■□□ 2.75
SP3-208ENST00000640958 UBTFP17480 764 aaKnown RBP32.2■■■□□ 2.74
SP3-208ENST00000640958 RAPGEF2Q9Y4G8 1499 aa32.13■■■□□ 2.73
SP3-208ENST00000640958 FANCD2Q9BXW9 1451 aa32.07■■■□□ 2.72
SP3-208ENST00000640958 ERICH3Q5RHP9 1530 aa32.05■■■□□ 2.72
SP3-208ENST00000640958 KIF27Q86VH2 1401 aa32.04■■■□□ 2.72
SP3-208ENST00000640958 PRXQ9BXM0 1461 aa32.04■■■□□ 2.72
SP3-208ENST00000640958 NESP48681 1621 aa31.99■■■□□ 2.71
SP3-208ENST00000640958 LAMC3Q9Y6N6 1575 aa31.96■■■□□ 2.71
SP3-208ENST00000640958 FGD5Q6ZNL6 1462 aa31.96■■■□□ 2.71
SP3-208ENST00000640958 CLIP1P30622 1438 aa31.93■■■□□ 2.7
SP3-208ENST00000640958 PPARGC1BQ86YN6 1023 aaKnown RBP31.91■■■□□ 2.7
SP3-208ENST00000640958 DNMBPQ6XZF7 1577 aa31.91■■■□□ 2.7
SP3-208ENST00000640958 CUX2O14529 1486 aa31.86■■■□□ 2.69
SP3-208ENST00000640958 TOPBP1Q92547 1522 aa31.81■■■□□ 2.68
SP3-208ENST00000640958 DNAJC5BQ9UF47 199 aa31.78■■■□□ 2.68
SP3-208ENST00000640958 VPS8Q8N3P4 1428 aa31.75■■■□□ 2.67
SP3-208ENST00000640958 IGF1RP08069 1367 aa31.72■■■□□ 2.67
SP3-208ENST00000640958 POLA1P09884 1462 aaPredicted RBP31.72■■■□□ 2.67
SP3-208ENST00000640958 URB2Q14146 1524 aaKnown RBP31.67■■■□□ 2.66
SP3-208ENST00000640958 ABCA10Q8WWZ4 1543 aa31.67■■■□□ 2.66
SP3-208ENST00000640958 PDS5BQ9NTI5 1447 aa31.65■■■□□ 2.66
SP3-208ENST00000640958 RAD54L2Q9Y4B4 1467 aa31.64■■■□□ 2.66
SP3-208ENST00000640958 KIF21AQ7Z4S6 1674 aa31.64■■■□□ 2.66
SP3-208ENST00000640958 ARAP1Q96P48 1450 aa31.59■■■□□ 2.65
SP3-208ENST00000640958 WDR97A6NE52 1622 aa31.59■■■□□ 2.65
SP3-208ENST00000640958 CARMIL1Q5VZK9 1371 aa31.56■■■□□ 2.64
SP3-208ENST00000640958 RANGAP1P46060 587 aaPredicted RBP31.55■■■□□ 2.64
SP3-208ENST00000640958 TTBK1Q5TCY1 1321 aaPredicted RBP31.54■■■□□ 2.64
SP3-208ENST00000640958 ARHGAP35Q9NRY4 1499 aa31.45■■■□□ 2.62
SP3-208ENST00000640958 CUL7Q14999 1698 aa31.44■■■□□ 2.62
SP3-208ENST00000640958 ZEB1P37275 1124 aaPredicted RBP31.41■■■□□ 2.62
SP3-208ENST00000640958 ABCA5Q8WWZ7 1642 aa31.41■■■□□ 2.62
SP3-208ENST00000640958 APLP2Q06481 763 aa31.33■■■□□ 2.61
SP3-208ENST00000640958 TARBP1Q13395 1621 aaKnown RBP31.31■■■□□ 2.6
SP3-208ENST00000640958 MRC2Q9UBG0 1479 aa31.26■■■□□ 2.6
SP3-208ENST00000640958 CTTNBP2Q8WZ74 1663 aa31.24■■■□□ 2.59
SP3-208ENST00000640958 GAPVD1Q14C86 1478 aa31.24■■■□□ 2.59
SP3-208ENST00000640958 TDRD9Q8NDG6 1382 aaKnown RBP31.23■■■□□ 2.59
SP3-208ENST00000640958 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.14■■■□□ 2.58
SP3-208ENST00000640958 PBRM1Q86U86 1689 aa31.11■■■□□ 2.57
SP3-208ENST00000640958 EFCAB5A4FU69 1503 aa31.1■■■□□ 2.57
SP3-208ENST00000640958 WDR62O43379 1518 aa31.1■■■□□ 2.57
SP3-208ENST00000640958 KANK4Q5T7N3 995 aaPredicted RBP31.07■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms