RNA–Protein interactions for RNA: ENST00000557301.2

RGMA-210, Transcript of repulsive guidance molecule BMP co-receptor a, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RGMA, Length 1,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGMA-210ENST00000557301 NISCHQ9Y2I1 1504 aa44.99■■■■■ 4.79
RGMA-210ENST00000557301 CCDC180Q9P1Z9 1646 aa38.97■■■■□ 3.83
RGMA-210ENST00000557301 ZCCHC6Q5VYS8 1495 aaKnown RBP37.89■■■■□ 3.66
RGMA-210ENST00000557301 DCAF1Q9Y4B6 1507 aa37.18■■■■□ 3.54
RGMA-210ENST00000557301 SHROOM4Q9ULL8 1493 aa37.15■■■■□ 3.54
RGMA-210ENST00000557301 DCAF8L2P0C7V8 631 aa37.06■■■■□ 3.52
RGMA-210ENST00000557301 MYO15BQ96JP2 1530 aa36.51■■■■□ 3.44
RGMA-210ENST00000557301 ABCC9O60706 1549 aa36.37■■■■□ 3.41
RGMA-210ENST00000557301 NACADO15069 1562 aa36.16■■■■□ 3.38
RGMA-210ENST00000557301 SUPT5HO00267 1087 aaKnown RBP36.04■■■■□ 3.36
RGMA-210ENST00000557301 SCRIBQ14160 1630 aa35.95■■■■□ 3.34
RGMA-210ENST00000557301 RB1CC1Q8TDY2 1594 aa35.73■■■■□ 3.31
RGMA-210ENST00000557301 RSF1Q96T23 1441 aaPredicted RBP35.12■■■■□ 3.21
RGMA-210ENST00000557301 UNC13AQ9UPW8 1703 aa35.1■■■■□ 3.21
RGMA-210ENST00000557301 CECR2Q9BXF3 1484 aa34.92■■■■□ 3.18
RGMA-210ENST00000557301 MROH2BQ7Z745 1585 aa34.79■■■■□ 3.16
RGMA-210ENST00000557301 CHIC1Q5VXU3 224 aa34.78■■■■□ 3.16
RGMA-210ENST00000557301 BAZ1AQ9NRL2 1556 aaPredicted RBP34.7■■■■□ 3.15
RGMA-210ENST00000557301 BICRAQ9NZM4 1560 aa34.64■■■■□ 3.14
RGMA-210ENST00000557301 WIZO95785 1651 aa34.57■■■■□ 3.12
RGMA-210ENST00000557301 SMARCA4P51532 1647 aa34.48■■■■□ 3.11
RGMA-210ENST00000557301 PABPN1Q86U42 306 aaKnown RBP eCLIP34.43■■■■□ 3.1
RGMA-210ENST00000557301 TOP2AP11388 1531 aaKnown RBP34.18■■■■□ 3.06
RGMA-210ENST00000557301 PEG3Q9GZU2 1588 aa34.01■■■■□ 3.03
RGMA-210ENST00000557301 SMARCA2P51531 1590 aa33.89■■■■□ 3.02
RGMA-210ENST00000557301 CCDC88BA6NC98 1476 aa33.87■■■■□ 3.01
RGMA-210ENST00000557301 TRIM41Q8WV44 630 aa33.85■■■■□ 3.01
RGMA-210ENST00000557301 EIF4G1Q04637 1599 aaKnown RBP33.82■■■■□ 3
RGMA-210ENST00000557301 ATAD2BQ9ULI0 1458 aa33.76■■■□□ 2.99
RGMA-210ENST00000557301 BAZ1BQ9UIG0 1483 aaKnown RBP33.61■■■□□ 2.97
RGMA-210ENST00000557301 LOC105371045A0A1W2PR82 267 aa33.49■■■□□ 2.95
RGMA-210ENST00000557301 HMGXB3Q12766 1538 aa33.36■■■□□ 2.93
RGMA-210ENST00000557301 NCAPD3P42695 1498 aa33.36■■■□□ 2.93
RGMA-210ENST00000557301 ABCC8Q09428 1581 aa33.35■■■□□ 2.93
RGMA-210ENST00000557301 FAM9AQ8IZU1 332 aaPredicted RBP33.26■■■□□ 2.91
RGMA-210ENST00000557301 WRNQ14191 1432 aaPredicted RBP eCLIP33.05■■■□□ 2.88
RGMA-210ENST00000557301 DNAJC5BQ9UF47 199 aa32.95■■■□□ 2.87
RGMA-210ENST00000557301 CC2D2AQ9P2K1 1620 aa32.93■■■□□ 2.86
RGMA-210ENST00000557301 SYNJ1O43426 1573 aa32.89■■■□□ 2.86
RGMA-210ENST00000557301 EEA1Q15075 1411 aa32.87■■■□□ 2.85
RGMA-210ENST00000557301 SOGA1O94964 1423 aa32.83■■■□□ 2.85
RGMA-210ENST00000557301 CFTRP13569 1480 aa32.78■■■□□ 2.84
RGMA-210ENST00000557301 EHMT2Q96KQ7 1210 aa32.78■■■□□ 2.84
RGMA-210ENST00000557301 TOP2BQ02880 1626 aa32.72■■■□□ 2.83
RGMA-210ENST00000557301 PRDM2Q13029 1718 aa32.71■■■□□ 2.83
RGMA-210ENST00000557301 RUSC2Q8N2Y8 1516 aa32.68■■■□□ 2.82
RGMA-210ENST00000557301 BIVM-ERCC5R4GMW8 1640 aa32.68■■■□□ 2.82
RGMA-210ENST00000557301 CSRNP3Q8WYN3 585 aa32.67■■■□□ 2.82
RGMA-210ENST00000557301 PCGF6Q9BYE7 350 aa32.57■■■□□ 2.81
RGMA-210ENST00000557301 CADPSQ9ULU8 1353 aa32.56■■■□□ 2.8
RGMA-210ENST00000557301 CUX1P39880 1505 aa32.49■■■□□ 2.79
RGMA-210ENST00000557301 TNIKQ9UKE5 1360 aa32.46■■■□□ 2.79
RGMA-210ENST00000557301 GOLGA3Q08378 1498 aa32.46■■■□□ 2.79
RGMA-210ENST00000557301 KIF21BO75037 1637 aa32.43■■■□□ 2.78
RGMA-210ENST00000557301 TRIM26Q12899 539 aaPredicted RBP32.42■■■□□ 2.78
RGMA-210ENST00000557301 CEP164Q9UPV0 1460 aa32.4■■■□□ 2.78
RGMA-210ENST00000557301 CEP162Q5TB80 1403 aa32.33■■■□□ 2.77
RGMA-210ENST00000557301 UBTFP17480 764 aaKnown RBP32.33■■■□□ 2.77
RGMA-210ENST00000557301 FANCD2Q9BXW9 1451 aa32.21■■■□□ 2.75
RGMA-210ENST00000557301 KIF27Q86VH2 1401 aa32.17■■■□□ 2.74
RGMA-210ENST00000557301 LAMC3Q9Y6N6 1575 aa32.15■■■□□ 2.74
RGMA-210ENST00000557301 RAPGEF2Q9Y4G8 1499 aa32.13■■■□□ 2.73
RGMA-210ENST00000557301 NESP48681 1621 aa32.11■■■□□ 2.73
RGMA-210ENST00000557301 ERICH3Q5RHP9 1530 aa32.1■■■□□ 2.73
RGMA-210ENST00000557301 PRXQ9BXM0 1461 aa32.08■■■□□ 2.73
RGMA-210ENST00000557301 HRCP23327 699 aa32.08■■■□□ 2.73
RGMA-210ENST00000557301 FGD5Q6ZNL6 1462 aa32.05■■■□□ 2.72
RGMA-210ENST00000557301 DNMBPQ6XZF7 1577 aa32.03■■■□□ 2.72
RGMA-210ENST00000557301 CLIP1P30622 1438 aa31.96■■■□□ 2.71
RGMA-210ENST00000557301 CUX2O14529 1486 aa31.96■■■□□ 2.71
RGMA-210ENST00000557301 TOPBP1Q92547 1522 aa31.93■■■□□ 2.7
RGMA-210ENST00000557301 PDS5BQ9NTI5 1447 aa31.89■■■□□ 2.7
RGMA-210ENST00000557301 PPARGC1BQ86YN6 1023 aaKnown RBP31.88■■■□□ 2.69
RGMA-210ENST00000557301 IGF1RP08069 1367 aa31.83■■■□□ 2.69
RGMA-210ENST00000557301 POLA1P09884 1462 aaPredicted RBP31.81■■■□□ 2.68
RGMA-210ENST00000557301 ABCA10Q8WWZ4 1543 aa31.77■■■□□ 2.68
RGMA-210ENST00000557301 URB2Q14146 1524 aaKnown RBP31.77■■■□□ 2.68
RGMA-210ENST00000557301 KIF21AQ7Z4S6 1674 aa31.75■■■□□ 2.67
RGMA-210ENST00000557301 VPS8Q8N3P4 1428 aa31.75■■■□□ 2.67
RGMA-210ENST00000557301 RAD54L2Q9Y4B4 1467 aa31.73■■■□□ 2.67
RGMA-210ENST00000557301 CARMIL1Q5VZK9 1371 aa31.68■■■□□ 2.66
RGMA-210ENST00000557301 RANGAP1P46060 587 aaPredicted RBP31.65■■■□□ 2.66
RGMA-210ENST00000557301 WDR97A6NE52 1622 aa31.63■■■□□ 2.65
RGMA-210ENST00000557301 ARAP1Q96P48 1450 aa31.56■■■□□ 2.64
RGMA-210ENST00000557301 CUL7Q14999 1698 aa31.54■■■□□ 2.64
RGMA-210ENST00000557301 TTBK1Q5TCY1 1321 aaPredicted RBP31.52■■■□□ 2.64
RGMA-210ENST00000557301 APLP2Q06481 763 aa31.51■■■□□ 2.64
RGMA-210ENST00000557301 ABCA5Q8WWZ7 1642 aa31.47■■■□□ 2.63
RGMA-210ENST00000557301 ARHGAP35Q9NRY4 1499 aa31.46■■■□□ 2.63
RGMA-210ENST00000557301 MRC2Q9UBG0 1479 aa31.44■■■□□ 2.62
RGMA-210ENST00000557301 ZEB1P37275 1124 aaPredicted RBP31.43■■■□□ 2.62
RGMA-210ENST00000557301 TARBP1Q13395 1621 aaKnown RBP31.41■■■□□ 2.62
RGMA-210ENST00000557301 GAPVD1Q14C86 1478 aa31.39■■■□□ 2.61
RGMA-210ENST00000557301 TDRD9Q8NDG6 1382 aaKnown RBP31.37■■■□□ 2.61
RGMA-210ENST00000557301 CTTNBP2Q8WZ74 1663 aa31.3■■■□□ 2.6
RGMA-210ENST00000557301 WDR62O43379 1518 aa31.25■■■□□ 2.59
RGMA-210ENST00000557301 PBRM1Q86U86 1689 aa31.2■■■□□ 2.59
RGMA-210ENST00000557301 EFCAB5A4FU69 1503 aa31.18■■■□□ 2.58
RGMA-210ENST00000557301 IFT140Q96RY7 1462 aa31.15■■■□□ 2.58
RGMA-210ENST00000557301 ERCC6Q03468 1493 aa31.13■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms