RNA–Protein interactions for RNA: ENST00000543949.2

COMMD5-207, Transcript of COMM domain containing 5, humanhuman

APPRIS P1 TSL 3 BASIC

Gene COMMD5, Length 1,571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD5-207ENST00000543949 NISCHQ9Y2I1 1504 aa49.1■■■■■ 5.45
COMMD5-207ENST00000543949 CCDC180Q9P1Z9 1646 aa43.18■■■■■ 4.5
COMMD5-207ENST00000543949 ZCCHC6Q5VYS8 1495 aaKnown RBP41.17■■■■■ 4.18
COMMD5-207ENST00000543949 ABCC9O60706 1549 aa41.09■■■■■ 4.17
COMMD5-207ENST00000543949 DCAF1Q9Y4B6 1507 aa40.67■■■■■ 4.1
COMMD5-207ENST00000543949 DCAF8L2P0C7V8 631 aa40.59■■■■■ 4.09
COMMD5-207ENST00000543949 MYO15BQ96JP2 1530 aa40.39■■■■■ 4.06
COMMD5-207ENST00000543949 NACADO15069 1562 aa40.28■■■■■ 4.04
COMMD5-207ENST00000543949 RB1CC1Q8TDY2 1594 aa40.05■■■■■ 4
COMMD5-207ENST00000543949 SHROOM4Q9ULL8 1493 aa39.58■■■■□ 3.93
COMMD5-207ENST00000543949 SCRIBQ14160 1630 aa39.51■■■■□ 3.92
COMMD5-207ENST00000543949 UNC13AQ9UPW8 1703 aa39.21■■■■□ 3.87
COMMD5-207ENST00000543949 BICRAQ9NZM4 1560 aa38.76■■■■□ 3.8
COMMD5-207ENST00000543949 PABPN1Q86U42 306 aaKnown RBP eCLIP38.57■■■■□ 3.76
COMMD5-207ENST00000543949 CECR2Q9BXF3 1484 aa38.11■■■■□ 3.69
COMMD5-207ENST00000543949 BAZ1AQ9NRL2 1556 aaPredicted RBP38.01■■■■□ 3.68
COMMD5-207ENST00000543949 SMARCA4P51532 1647 aa37.88■■■■□ 3.65
COMMD5-207ENST00000543949 MROH2BQ7Z745 1585 aa37.87■■■■□ 3.65
COMMD5-207ENST00000543949 SUPT5HO00267 1087 aaKnown RBP37.85■■■■□ 3.65
COMMD5-207ENST00000543949 RSF1Q96T23 1441 aaPredicted RBP37.85■■■■□ 3.65
COMMD5-207ENST00000543949 EIF4G1Q04637 1599 aaKnown RBP37.67■■■■□ 3.62
COMMD5-207ENST00000543949 WIZO95785 1651 aa37.57■■■■□ 3.6
COMMD5-207ENST00000543949 PEG3Q9GZU2 1588 aa37.46■■■■□ 3.59
COMMD5-207ENST00000543949 SMARCA2P51531 1590 aa37.38■■■■□ 3.57
COMMD5-207ENST00000543949 ATAD2BQ9ULI0 1458 aa37.33■■■■□ 3.57
COMMD5-207ENST00000543949 CC2D2AQ9P2K1 1620 aa37.23■■■■□ 3.55
COMMD5-207ENST00000543949 TOP2AP11388 1531 aaKnown RBP37.22■■■■□ 3.55
COMMD5-207ENST00000543949 BAZ1BQ9UIG0 1483 aaKnown RBP37.13■■■■□ 3.53
COMMD5-207ENST00000543949 NCAPD3P42695 1498 aa37.12■■■■□ 3.53
COMMD5-207ENST00000543949 HMGXB3Q12766 1538 aa37.08■■■■□ 3.53
COMMD5-207ENST00000543949 CCDC88BA6NC98 1476 aa36.75■■■■□ 3.47
COMMD5-207ENST00000543949 DNAJC5BQ9UF47 199 aa36.55■■■■□ 3.44
COMMD5-207ENST00000543949 CFTRP13569 1480 aa36.15■■■■□ 3.38
COMMD5-207ENST00000543949 CADPSQ9ULU8 1353 aa36.11■■■■□ 3.37
COMMD5-207ENST00000543949 PRDM2Q13029 1718 aa36.09■■■■□ 3.37
COMMD5-207ENST00000543949 LAMC3Q9Y6N6 1575 aa36■■■■□ 3.35
COMMD5-207ENST00000543949 CHIC1Q5VXU3 224 aa35.98■■■■□ 3.35
COMMD5-207ENST00000543949 NESP48681 1621 aa35.89■■■■□ 3.34
COMMD5-207ENST00000543949 ABCC8Q09428 1581 aa35.81■■■■□ 3.32
COMMD5-207ENST00000543949 FANCD2Q9BXW9 1451 aa35.72■■■■□ 3.31
COMMD5-207ENST00000543949 PDS5BQ9NTI5 1447 aa35.69■■■■□ 3.3
COMMD5-207ENST00000543949 WRNQ14191 1432 aaPredicted RBP eCLIP35.69■■■■□ 3.3
COMMD5-207ENST00000543949 TRIM41Q8WV44 630 aa35.68■■■■□ 3.3
COMMD5-207ENST00000543949 CEP164Q9UPV0 1460 aa35.59■■■■□ 3.29
COMMD5-207ENST00000543949 KIF21AQ7Z4S6 1674 aa35.57■■■■□ 3.28
COMMD5-207ENST00000543949 SYNJ1O43426 1573 aa35.55■■■■□ 3.28
COMMD5-207ENST00000543949 TOP2BQ02880 1626 aa35.49■■■■□ 3.27
COMMD5-207ENST00000543949 BIVM-ERCC5R4GMW8 1640 aa35.49■■■■□ 3.27
COMMD5-207ENST00000543949 CUX1P39880 1505 aa35.47■■■■□ 3.27
COMMD5-207ENST00000543949 DNMBPQ6XZF7 1577 aa35.36■■■■□ 3.25
COMMD5-207ENST00000543949 ERCC6Q03468 1493 aa35.34■■■■□ 3.25
COMMD5-207ENST00000543949 TOPBP1Q92547 1522 aa35.29■■■■□ 3.24
COMMD5-207ENST00000543949 URB2Q14146 1524 aaKnown RBP35.28■■■■□ 3.24
COMMD5-207ENST00000543949 MRC2Q9UBG0 1479 aa35.27■■■■□ 3.24
COMMD5-207ENST00000543949 FGD5Q6ZNL6 1462 aa35.17■■■■□ 3.22
COMMD5-207ENST00000543949 THOC2Q8NI27 1593 aaKnown RBP35.11■■■■□ 3.21
COMMD5-207ENST00000543949 WDR62O43379 1518 aa35.11■■■■□ 3.21
COMMD5-207ENST00000543949 POLA1P09884 1462 aaPredicted RBP35.06■■■■□ 3.2
COMMD5-207ENST00000543949 SOGA1O94964 1423 aa35.01■■■■□ 3.19
COMMD5-207ENST00000543949 EEA1Q15075 1411 aa34.98■■■■□ 3.19
COMMD5-207ENST00000543949 FAM9AQ8IZU1 332 aaPredicted RBP34.93■■■■□ 3.18
COMMD5-207ENST00000543949 RAD54L2Q9Y4B4 1467 aa34.9■■■■□ 3.18
COMMD5-207ENST00000543949 RUSC2Q8N2Y8 1516 aa34.88■■■■□ 3.17
COMMD5-207ENST00000543949 ABCA10Q8WWZ4 1543 aa34.87■■■■□ 3.17
COMMD5-207ENST00000543949 KIF27Q86VH2 1401 aa34.85■■■■□ 3.17
COMMD5-207ENST00000543949 WDR97A6NE52 1622 aa34.85■■■■□ 3.17
COMMD5-207ENST00000543949 CUX2O14529 1486 aa34.84■■■■□ 3.17
COMMD5-207ENST00000543949 TARBP1Q13395 1621 aaKnown RBP34.81■■■■□ 3.16
COMMD5-207ENST00000543949 IFT140Q96RY7 1462 aa34.76■■■■□ 3.15
COMMD5-207ENST00000543949 CSRNP3Q8WYN3 585 aa34.74■■■■□ 3.15
COMMD5-207ENST00000543949 ABCA5Q8WWZ7 1642 aa34.65■■■■□ 3.14
COMMD5-207ENST00000543949 TDRD9Q8NDG6 1382 aaKnown RBP34.59■■■■□ 3.13
COMMD5-207ENST00000543949 GAPVD1Q14C86 1478 aa34.57■■■■□ 3.12
COMMD5-207ENST00000543949 KIF21BO75037 1637 aa34.55■■■■□ 3.12
COMMD5-207ENST00000543949 LOC105371045A0A1W2PR82 267 aa34.53■■■■□ 3.12
COMMD5-207ENST00000543949 IGF1RP08069 1367 aa34.51■■■■□ 3.12
COMMD5-207ENST00000543949 ZNF608Q9ULD9 1512 aaPredicted RBP34.5■■■■□ 3.11
COMMD5-207ENST00000543949 ERICH3Q5RHP9 1530 aa34.49■■■■□ 3.11
COMMD5-207ENST00000543949 PBRM1Q86U86 1689 aa34.48■■■■□ 3.11
COMMD5-207ENST00000543949 EIF4G3O43432 1585 aaKnown RBP34.47■■■■□ 3.11
COMMD5-207ENST00000543949 AQRO60306 1485 aaKnown RBP eCLIP34.46■■■■□ 3.11
COMMD5-207ENST00000543949 PRXQ9BXM0 1461 aa34.46■■■■□ 3.11
COMMD5-207ENST00000543949 CUL7Q14999 1698 aa34.45■■■■□ 3.1
COMMD5-207ENST00000543949 GOLGA3Q08378 1498 aa34.44■■■■□ 3.1
COMMD5-207ENST00000543949 EHMT2Q96KQ7 1210 aa34.41■■■■□ 3.1
COMMD5-207ENST00000543949 GRIN2BQ13224 1484 aa34.39■■■■□ 3.1
COMMD5-207ENST00000543949 CARMIL1Q5VZK9 1371 aa34.36■■■■□ 3.09
COMMD5-207ENST00000543949 RAPGEF2Q9Y4G8 1499 aa34.34■■■■□ 3.09
COMMD5-207ENST00000543949 UBTFP17480 764 aaKnown RBP34.24■■■■□ 3.07
COMMD5-207ENST00000543949 ADAMTS12P58397 1594 aa34.23■■■■□ 3.07
COMMD5-207ENST00000543949 TNIKQ9UKE5 1360 aa34.21■■■■□ 3.07
COMMD5-207ENST00000543949 FHAD1B1AJZ9 1412 aa34.2■■■■□ 3.07
COMMD5-207ENST00000543949 SNAPC4Q5SXM2 1469 aa34.2■■■■□ 3.06
COMMD5-207ENST00000543949 MAGI1Q96QZ7 1491 aaPredicted RBP34.18■■■■□ 3.06
COMMD5-207ENST00000543949 SYNJ2O15056 1496 aa34.03■■■■□ 3.04
COMMD5-207ENST00000543949 CTTNBP2Q8WZ74 1663 aa34■■■■□ 3.03
COMMD5-207ENST00000543949 CEP162Q5TB80 1403 aa33.98■■■■□ 3.03
COMMD5-207ENST00000543949 GRIN2AQ12879 1464 aa33.96■■■■□ 3.03
COMMD5-207ENST00000543949 CHMP7Q8WUX9 453 aaPredicted RBP33.93■■■■□ 3.02
COMMD5-207ENST00000543949 FBLN2P98095 1184 aa33.85■■■■□ 3.01
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms