RNA–Protein interactions for RNA: ENST00000543566.5

ARL6IP4-220, Transcript of ADP ribosylation factor like GTPase 6 interacting protein 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ARL6IP4, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARL6IP4-220ENST00000543566 NISCHQ9Y2I1 1504 aa48.15■■■■■ 5.3
ARL6IP4-220ENST00000543566 CCDC180Q9P1Z9 1646 aa42.27■■■■■ 4.36
ARL6IP4-220ENST00000543566 ZCCHC6Q5VYS8 1495 aaKnown RBP40.37■■■■■ 4.05
ARL6IP4-220ENST00000543566 ABCC9O60706 1549 aa40.25■■■■■ 4.03
ARL6IP4-220ENST00000543566 DCAF1Q9Y4B6 1507 aa39.91■■■■□ 3.98
ARL6IP4-220ENST00000543566 MYO15BQ96JP2 1530 aa39.66■■■■□ 3.94
ARL6IP4-220ENST00000543566 DCAF8L2P0C7V8 631 aa39.64■■■■□ 3.94
ARL6IP4-220ENST00000543566 NACADO15069 1562 aa39.47■■■■□ 3.91
ARL6IP4-220ENST00000543566 RB1CC1Q8TDY2 1594 aa39.21■■■■□ 3.87
ARL6IP4-220ENST00000543566 SHROOM4Q9ULL8 1493 aa38.8■■■■□ 3.8
ARL6IP4-220ENST00000543566 SCRIBQ14160 1630 aa38.65■■■■□ 3.78
ARL6IP4-220ENST00000543566 UNC13AQ9UPW8 1703 aa38.36■■■■□ 3.73
ARL6IP4-220ENST00000543566 BICRAQ9NZM4 1560 aa38.06■■■■□ 3.68
ARL6IP4-220ENST00000543566 PABPN1Q86U42 306 aaKnown RBP eCLIP37.8■■■■□ 3.647e-8■■■■□ 20.2
ARL6IP4-220ENST00000543566 CECR2Q9BXF3 1484 aa37.4■■■■□ 3.58
ARL6IP4-220ENST00000543566 SUPT5HO00267 1087 aaKnown RBP37.24■■■■□ 3.55
ARL6IP4-220ENST00000543566 BAZ1AQ9NRL2 1556 aaPredicted RBP37.21■■■■□ 3.55
ARL6IP4-220ENST00000543566 MROH2BQ7Z745 1585 aa37.14■■■■□ 3.54
ARL6IP4-220ENST00000543566 RSF1Q96T23 1441 aaPredicted RBP37.13■■■■□ 3.53
ARL6IP4-220ENST00000543566 SMARCA4P51532 1647 aa37.11■■■■□ 3.53
ARL6IP4-220ENST00000543566 EIF4G1Q04637 1599 aaKnown RBP36.92■■■■□ 3.5
ARL6IP4-220ENST00000543566 WIZO95785 1651 aa36.77■■■■□ 3.48
ARL6IP4-220ENST00000543566 PEG3Q9GZU2 1588 aa36.76■■■■□ 3.48
ARL6IP4-220ENST00000543566 ATAD2BQ9ULI0 1458 aa36.63■■■■□ 3.45
ARL6IP4-220ENST00000543566 SMARCA2P51531 1590 aa36.61■■■■□ 3.45
ARL6IP4-220ENST00000543566 CC2D2AQ9P2K1 1620 aa36.47■■■■□ 3.43
ARL6IP4-220ENST00000543566 TOP2AP11388 1531 aaKnown RBP36.45■■■■□ 3.43
ARL6IP4-220ENST00000543566 NCAPD3P42695 1498 aa36.44■■■■□ 3.42
ARL6IP4-220ENST00000543566 HMGXB3Q12766 1538 aa36.35■■■■□ 3.41
ARL6IP4-220ENST00000543566 BAZ1BQ9UIG0 1483 aaKnown RBP36.35■■■■□ 3.41
ARL6IP4-220ENST00000543566 CCDC88BA6NC98 1476 aa36.03■■■■□ 3.36
ARL6IP4-220ENST00000543566 DNAJC5BQ9UF47 199 aa35.97■■■■□ 3.35
ARL6IP4-220ENST00000543566 CHIC1Q5VXU3 224 aa35.6■■■■□ 3.29
ARL6IP4-220ENST00000543566 CFTRP13569 1480 aa35.47■■■■□ 3.27
ARL6IP4-220ENST00000543566 CADPSQ9ULU8 1353 aa35.42■■■■□ 3.26
ARL6IP4-220ENST00000543566 LAMC3Q9Y6N6 1575 aa35.26■■■■□ 3.23
ARL6IP4-220ENST00000543566 PRDM2Q13029 1718 aa35.24■■■■□ 3.23
ARL6IP4-220ENST00000543566 NESP48681 1621 aa35.2■■■■□ 3.23
ARL6IP4-220ENST00000543566 TRIM41Q8WV44 630 aa35.08■■■■□ 3.21
ARL6IP4-220ENST00000543566 ABCC8Q09428 1581 aa35.06■■■■□ 3.2
ARL6IP4-220ENST00000543566 FANCD2Q9BXW9 1451 aa34.99■■■■□ 3.19
ARL6IP4-220ENST00000543566 PDS5BQ9NTI5 1447 aa34.96■■■■□ 3.19
ARL6IP4-220ENST00000543566 WRNQ14191 1432 aaPredicted RBP eCLIP34.94■■■■□ 3.18
ARL6IP4-220ENST00000543566 CEP164Q9UPV0 1460 aa34.83■■■■□ 3.17
ARL6IP4-220ENST00000543566 SYNJ1O43426 1573 aa34.82■■■■□ 3.16
ARL6IP4-220ENST00000543566 KIF21AQ7Z4S6 1674 aa34.78■■■■□ 3.16
ARL6IP4-220ENST00000543566 CUX1P39880 1505 aa34.76■■■■□ 3.16
ARL6IP4-220ENST00000543566 TOP2BQ02880 1626 aa34.76■■■■□ 3.15
ARL6IP4-220ENST00000543566 BIVM-ERCC5R4GMW8 1640 aa34.74■■■■□ 3.15
ARL6IP4-220ENST00000543566 DNMBPQ6XZF7 1577 aa34.63■■■■□ 3.13
ARL6IP4-220ENST00000543566 URB2Q14146 1524 aaKnown RBP34.61■■■■□ 3.13
ARL6IP4-220ENST00000543566 TOPBP1Q92547 1522 aa34.58■■■■□ 3.13
ARL6IP4-220ENST00000543566 MRC2Q9UBG0 1479 aa34.55■■■■□ 3.12
ARL6IP4-220ENST00000543566 ERCC6Q03468 1493 aa34.55■■■■□ 3.12
ARL6IP4-220ENST00000543566 FGD5Q6ZNL6 1462 aa34.45■■■■□ 3.11
ARL6IP4-220ENST00000543566 WDR62O43379 1518 aa34.44■■■■□ 3.1
ARL6IP4-220ENST00000543566 THOC2Q8NI27 1593 aaKnown RBP34.42■■■■□ 3.1
ARL6IP4-220ENST00000543566 POLA1P09884 1462 aaPredicted RBP34.37■■■■□ 3.09
ARL6IP4-220ENST00000543566 FAM9AQ8IZU1 332 aaPredicted RBP34.36■■■■□ 3.09
ARL6IP4-220ENST00000543566 EEA1Q15075 1411 aa34.35■■■■□ 3.09
ARL6IP4-220ENST00000543566 SOGA1O94964 1423 aa34.34■■■■□ 3.09
ARL6IP4-220ENST00000543566 RUSC2Q8N2Y8 1516 aa34.21■■■■□ 3.07
ARL6IP4-220ENST00000543566 RAD54L2Q9Y4B4 1467 aa34.2■■■■□ 3.07
ARL6IP4-220ENST00000543566 ABCA10Q8WWZ4 1543 aa34.19■■■■□ 3.06
ARL6IP4-220ENST00000543566 CUX2O14529 1486 aa34.18■■■■□ 3.06
ARL6IP4-220ENST00000543566 LOC105371045A0A1W2PR82 267 aa34.16■■■■□ 3.06
ARL6IP4-220ENST00000543566 TARBP1Q13395 1621 aaKnown RBP34.13■■■■□ 3.05
ARL6IP4-220ENST00000543566 WDR97A6NE52 1622 aa34.13■■■■□ 3.05
ARL6IP4-220ENST00000543566 KIF27Q86VH2 1401 aa34.11■■■■□ 3.05
ARL6IP4-220ENST00000543566 CSRNP3Q8WYN3 585 aa34.07■■■■□ 3.05
ARL6IP4-220ENST00000543566 IFT140Q96RY7 1462 aa34.06■■■■□ 3.04
ARL6IP4-220ENST00000543566 ABCA5Q8WWZ7 1642 aa33.95■■■■□ 3.03
ARL6IP4-220ENST00000543566 KIF21BO75037 1637 aa33.94■■■■□ 3.02
ARL6IP4-220ENST00000543566 TDRD9Q8NDG6 1382 aaKnown RBP33.89■■■■□ 3.02
ARL6IP4-220ENST00000543566 IGF1RP08069 1367 aa33.86■■■■□ 3.01
ARL6IP4-220ENST00000543566 GOLGA3Q08378 1498 aa33.85■■■■□ 3.01
ARL6IP4-220ENST00000543566 GAPVD1Q14C86 1478 aa33.85■■■■□ 3.01
ARL6IP4-220ENST00000543566 ZNF608Q9ULD9 1512 aaPredicted RBP33.83■■■■□ 3.01
ARL6IP4-220ENST00000543566 EHMT2Q96KQ7 1210 aa33.83■■■■□ 3.01
ARL6IP4-220ENST00000543566 PRXQ9BXM0 1461 aa33.8■■■■□ 3
ARL6IP4-220ENST00000543566 AQRO60306 1485 aaKnown RBP eCLIP33.78■■■■□ 34e-7■■■■■ 38.3
ARL6IP4-220ENST00000543566 ERICH3Q5RHP9 1530 aa33.78■■■■□ 3
ARL6IP4-220ENST00000543566 EIF4G3O43432 1585 aaKnown RBP33.74■■■□□ 2.99
ARL6IP4-220ENST00000543566 PBRM1Q86U86 1689 aa33.69■■■□□ 2.98
ARL6IP4-220ENST00000543566 GRIN2BQ13224 1484 aa33.69■■■□□ 2.98
ARL6IP4-220ENST00000543566 TNIKQ9UKE5 1360 aa33.68■■■□□ 2.98
ARL6IP4-220ENST00000543566 RAPGEF2Q9Y4G8 1499 aa33.68■■■□□ 2.98
ARL6IP4-220ENST00000543566 CUL7Q14999 1698 aa33.67■■■□□ 2.98
ARL6IP4-220ENST00000543566 CARMIL1Q5VZK9 1371 aa33.66■■■□□ 2.98
ARL6IP4-220ENST00000543566 UBTFP17480 764 aaKnown RBP33.6■■■□□ 2.97
ARL6IP4-220ENST00000543566 ADAMTS12P58397 1594 aa33.53■■■□□ 2.96
ARL6IP4-220ENST00000543566 FHAD1B1AJZ9 1412 aa33.51■■■□□ 2.95
ARL6IP4-220ENST00000543566 SNAPC4Q5SXM2 1469 aa33.49■■■□□ 2.95
ARL6IP4-220ENST00000543566 MAGI1Q96QZ7 1491 aaPredicted RBP33.49■■■□□ 2.95
ARL6IP4-220ENST00000543566 CEP162Q5TB80 1403 aa33.48■■■□□ 2.95
ARL6IP4-220ENST00000543566 SYNJ2O15056 1496 aa33.34■■■□□ 2.93
ARL6IP4-220ENST00000543566 GRIN2AQ12879 1464 aa33.27■■■□□ 2.92
ARL6IP4-220ENST00000543566 CLIP1P30622 1438 aa33.27■■■□□ 2.92
ARL6IP4-220ENST00000543566 CTTNBP2Q8WZ74 1663 aa33.19■■■□□ 2.9
ARL6IP4-220ENST00000543566 CHMP7Q8WUX9 453 aaPredicted RBP33.18■■■□□ 2.9
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms