RNA–Protein interactions for RNA: ENST00000539711.2

NIPA2-205, Transcript of NIPA magnesium transporter 2, humanhuman

TSL 2 BASIC

Gene NIPA2, Length 1,412 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPA2-205ENST00000539711 NISCHQ9Y2I1 1504 aa53.14■■■■■ 6.1
NIPA2-205ENST00000539711 CCDC180Q9P1Z9 1646 aa47.13■■■■■ 5.14
NIPA2-205ENST00000539711 ABCC9O60706 1549 aa45.89■■■■■ 4.94
NIPA2-205ENST00000539711 ZCCHC6Q5VYS8 1495 aaKnown RBP44.35■■■■■ 4.69
NIPA2-205ENST00000539711 DCAF8L2P0C7V8 631 aa44.26■■■■■ 4.68
NIPA2-205ENST00000539711 RB1CC1Q8TDY2 1594 aa44.25■■■■■ 4.67
NIPA2-205ENST00000539711 NACADO15069 1562 aa44.23■■■■■ 4.67
NIPA2-205ENST00000539711 MYO15BQ96JP2 1530 aa44.02■■■■■ 4.64
NIPA2-205ENST00000539711 DCAF1Q9Y4B6 1507 aa43.96■■■■■ 4.63
NIPA2-205ENST00000539711 UNC13AQ9UPW8 1703 aa43.32■■■■■ 4.52
NIPA2-205ENST00000539711 SCRIBQ14160 1630 aa43.02■■■■■ 4.48
NIPA2-205ENST00000539711 PABPN1Q86U42 306 aaKnown RBP eCLIP42.91■■■■■ 4.46
NIPA2-205ENST00000539711 BICRAQ9NZM4 1560 aa42.91■■■■■ 4.46
NIPA2-205ENST00000539711 SHROOM4Q9ULL8 1493 aa42.45■■■■■ 4.39
NIPA2-205ENST00000539711 DNAJC5BQ9UF47 199 aa41.93■■■■■ 4.3
NIPA2-205ENST00000539711 EIF4G1Q04637 1599 aaKnown RBP41.76■■■■■ 4.28
NIPA2-205ENST00000539711 CC2D2AQ9P2K1 1620 aa41.55■■■■■ 4.24
NIPA2-205ENST00000539711 CECR2Q9BXF3 1484 aa41.39■■■■■ 4.22
NIPA2-205ENST00000539711 SMARCA4P51532 1647 aa41.17■■■■■ 4.18
NIPA2-205ENST00000539711 BAZ1AQ9NRL2 1556 aaPredicted RBP41.15■■■■■ 4.18
NIPA2-205ENST00000539711 MROH2BQ7Z745 1585 aa40.99■■■■■ 4.15
NIPA2-205ENST00000539711 ATAD2BQ9ULI0 1458 aa40.86■■■■■ 4.13
NIPA2-205ENST00000539711 SMARCA2P51531 1590 aa40.83■■■■■ 4.13
NIPA2-205ENST00000539711 NCAPD3P42695 1498 aa40.81■■■■■ 4.12
NIPA2-205ENST00000539711 PEG3Q9GZU2 1588 aa40.75■■■■■ 4.11
NIPA2-205ENST00000539711 RSF1Q96T23 1441 aaPredicted RBP40.64■■■■■ 4.1
NIPA2-205ENST00000539711 HMGXB3Q12766 1538 aa40.63■■■■■ 4.1
NIPA2-205ENST00000539711 WIZO95785 1651 aa40.59■■■■■ 4.09
NIPA2-205ENST00000539711 BAZ1BQ9UIG0 1483 aaKnown RBP40.54■■■■■ 4.08
NIPA2-205ENST00000539711 TOP2AP11388 1531 aaKnown RBP40.13■■■■■ 4.02
NIPA2-205ENST00000539711 SUPT5HO00267 1087 aaKnown RBP39.91■■■■□ 3.98
NIPA2-205ENST00000539711 NESP48681 1621 aa39.78■■■■□ 3.96
NIPA2-205ENST00000539711 LAMC3Q9Y6N6 1575 aa39.71■■■■□ 3.95
NIPA2-205ENST00000539711 CCDC88BA6NC98 1476 aa39.68■■■■□ 3.94
NIPA2-205ENST00000539711 CADPSQ9ULU8 1353 aa39.62■■■■□ 3.93
NIPA2-205ENST00000539711 ERCC6Q03468 1493 aa39.54■■■■□ 3.92
NIPA2-205ENST00000539711 CFTRP13569 1480 aa39.44■■■■□ 3.9
NIPA2-205ENST00000539711 PDS5BQ9NTI5 1447 aa39.42■■■■□ 3.9
NIPA2-205ENST00000539711 KIF21AQ7Z4S6 1674 aa39.37■■■■□ 3.89
NIPA2-205ENST00000539711 PRDM2Q13029 1718 aa39.24■■■■□ 3.87
NIPA2-205ENST00000539711 FANCD2Q9BXW9 1451 aa39.18■■■■□ 3.86
NIPA2-205ENST00000539711 THOC2Q8NI27 1593 aaKnown RBP39.15■■■■□ 3.86
NIPA2-205ENST00000539711 CEP164Q9UPV0 1460 aa39.12■■■■□ 3.85
NIPA2-205ENST00000539711 CUX2O14529 1486 aa39.03■■■■□ 3.84
NIPA2-205ENST00000539711 MRC2Q9UBG0 1479 aa39.01■■■■□ 3.84
NIPA2-205ENST00000539711 WDR62O43379 1518 aa38.89■■■■□ 3.82
NIPA2-205ENST00000539711 URB2Q14146 1524 aaKnown RBP38.79■■■■□ 3.8
NIPA2-205ENST00000539711 TOPBP1Q92547 1522 aa38.58■■■■□ 3.77
NIPA2-205ENST00000539711 ABCC8Q09428 1581 aa38.58■■■■□ 3.77
NIPA2-205ENST00000539711 DNMBPQ6XZF7 1577 aa38.56■■■■□ 3.76
NIPA2-205ENST00000539711 CUX1P39880 1505 aa38.43■■■■□ 3.74
NIPA2-205ENST00000539711 WRNQ14191 1432 aaPredicted RBP eCLIP38.29■■■■□ 3.72
NIPA2-205ENST00000539711 IFT140Q96RY7 1462 aa38.28■■■■□ 3.72
NIPA2-205ENST00000539711 POLA1P09884 1462 aaPredicted RBP38.28■■■■□ 3.72
NIPA2-205ENST00000539711 FGD5Q6ZNL6 1462 aa38.22■■■■□ 3.71
NIPA2-205ENST00000539711 SYNJ1O43426 1573 aa38.21■■■■□ 3.71
NIPA2-205ENST00000539711 TOP2BQ02880 1626 aa38.19■■■■□ 3.7
NIPA2-205ENST00000539711 BIVM-ERCC5R4GMW8 1640 aa38.19■■■■□ 3.7
NIPA2-205ENST00000539711 TARBP1Q13395 1621 aaKnown RBP38.17■■■■□ 3.7
NIPA2-205ENST00000539711 SOGA1O94964 1423 aa38.11■■■■□ 3.69
NIPA2-205ENST00000539711 RAD54L2Q9Y4B4 1467 aa38.11■■■■□ 3.69
NIPA2-205ENST00000539711 ZNF608Q9ULD9 1512 aaPredicted RBP38.1■■■■□ 3.69
NIPA2-205ENST00000539711 EIF4G3O43432 1585 aaKnown RBP37.98■■■■□ 3.67
NIPA2-205ENST00000539711 WDR97A6NE52 1622 aa37.92■■■■□ 3.66
NIPA2-205ENST00000539711 AQRO60306 1485 aaKnown RBP eCLIP37.91■■■■□ 3.66
NIPA2-205ENST00000539711 TDRD9Q8NDG6 1382 aaKnown RBP37.87■■■■□ 3.65
NIPA2-205ENST00000539711 ABCA10Q8WWZ4 1543 aa37.86■■■■□ 3.65
NIPA2-205ENST00000539711 ABCA5Q8WWZ7 1642 aa37.7■■■■□ 3.63
NIPA2-205ENST00000539711 GAPVD1Q14C86 1478 aa37.67■■■■□ 3.62
NIPA2-205ENST00000539711 TRIM41Q8WV44 630 aa37.65■■■■□ 3.62
NIPA2-205ENST00000539711 GRIN2BQ13224 1484 aa37.64■■■■□ 3.62
NIPA2-205ENST00000539711 PBRM1Q86U86 1689 aa37.64■■■■□ 3.62
NIPA2-205ENST00000539711 DNAJC5Q9H3Z4 198 aa37.59■■■■□ 3.61
NIPA2-205ENST00000539711 SNAPC4Q5SXM2 1469 aa37.56■■■■□ 3.6
NIPA2-205ENST00000539711 MAGI1Q96QZ7 1491 aaPredicted RBP37.52■■■■□ 3.6
NIPA2-205ENST00000539711 CHD1O14646 1710 aa37.5■■■■□ 3.59
NIPA2-205ENST00000539711 CHIC1Q5VXU3 224 aa37.47■■■■□ 3.59
NIPA2-205ENST00000539711 OSCARQ8IYS5 282 aa37.45■■■■□ 3.59
NIPA2-205ENST00000539711 KIF27Q86VH2 1401 aa37.45■■■■□ 3.59
NIPA2-205ENST00000539711 FBLN2P98095 1184 aa37.42■■■■□ 3.58
NIPA2-205ENST00000539711 ERICH3Q5RHP9 1530 aa37.41■■■■□ 3.58
NIPA2-205ENST00000539711 SYNJ2O15056 1496 aa37.38■■■■□ 3.57
NIPA2-205ENST00000539711 CHMP7Q8WUX9 453 aaPredicted RBP37.34■■■■□ 3.57
NIPA2-205ENST00000539711 ADAMTS12P58397 1594 aa37.32■■■■□ 3.57
NIPA2-205ENST00000539711 RUSC2Q8N2Y8 1516 aa37.3■■■■□ 3.56
NIPA2-205ENST00000539711 IGF1RP08069 1367 aa37.28■■■■□ 3.56
NIPA2-205ENST00000539711 FHAD1B1AJZ9 1412 aa37.24■■■■□ 3.55
NIPA2-205ENST00000539711 GRIN2AQ12879 1464 aa37.16■■■■□ 3.54
NIPA2-205ENST00000539711 CUL7Q14999 1698 aa37.15■■■■□ 3.54
NIPA2-205ENST00000539711 CARMIL1Q5VZK9 1371 aa37.06■■■■□ 3.52
NIPA2-205ENST00000539711 CLASP1Q7Z460 1538 aa37.05■■■■□ 3.52
NIPA2-205ENST00000539711 CEP170Q5SW79 1584 aa36.99■■■■□ 3.51
NIPA2-205ENST00000539711 NUP160Q12769 1436 aa36.98■■■■□ 3.51
NIPA2-205ENST00000539711 EEA1Q15075 1411 aa36.96■■■■□ 3.51
NIPA2-205ENST00000539711 FAM9AQ8IZU1 332 aaPredicted RBP36.9■■■■□ 3.5
NIPA2-205ENST00000539711 CSRNP3Q8WYN3 585 aa36.9■■■■□ 3.5
NIPA2-205ENST00000539711 RAPGEF2Q9Y4G8 1499 aa36.88■■■■□ 3.49
NIPA2-205ENST00000539711 ARHGEF11O15085 1522 aa36.87■■■■□ 3.49
NIPA2-205ENST00000539711 RIMBP3CA6NJZ7 1639 aa36.87■■■■□ 3.49
NIPA2-205ENST00000539711 RIMBP3BA6NNM3 1639 aa36.87■■■■□ 3.49
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms