Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
KRT78Q8N1N4 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
KRT78Q8N1N4 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
KRT78Q8N1N4 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
KRT78Q8N1N4 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
KRT78Q8N1N4 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
KRT78Q8N1N4 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.39■□□□□ 0.85
KRT78Q8N1N4 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.39■□□□□ 0.85
KRT78Q8N1N4 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
KRT78Q8N1N4 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
KRT78Q8N1N4 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.38■□□□□ 0.85
KRT78Q8N1N4 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
KRT78Q8N1N4 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
KRT78Q8N1N4 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.38■□□□□ 0.85
KRT78Q8N1N4 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.38■□□□□ 0.85
KRT78Q8N1N4 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC20.38■□□□□ 0.85
KRT78Q8N1N4 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.38■□□□□ 0.85
KRT78Q8N1N4 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
KRT78Q8N1N4 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
KRT78Q8N1N4 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
KRT78Q8N1N4 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.38■□□□□ 0.85
KRT78Q8N1N4 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
KRT78Q8N1N4 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
KRT78Q8N1N4 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
KRT78Q8N1N4 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.37■□□□□ 0.85
KRT78Q8N1N4 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.37■□□□□ 0.85
KRT78Q8N1N4 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
KRT78Q8N1N4 ZNRF2P3-201ENST00000424200 374 ntBASIC20.37■□□□□ 0.85
KRT78Q8N1N4 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
KRT78Q8N1N4 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
KRT78Q8N1N4 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
KRT78Q8N1N4 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.37■□□□□ 0.85
KRT78Q8N1N4 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
KRT78Q8N1N4 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
KRT78Q8N1N4 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
KRT78Q8N1N4 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
KRT78Q8N1N4 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
KRT78Q8N1N4 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
KRT78Q8N1N4 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
KRT78Q8N1N4 LINC02228-203ENST00000641970 1355 ntBASIC20.36■□□□□ 0.85
KRT78Q8N1N4 CLDN5-201ENST00000403084 2357 ntBASIC20.36■□□□□ 0.85
KRT78Q8N1N4 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
KRT78Q8N1N4 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.36■□□□□ 0.85
KRT78Q8N1N4 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
KRT78Q8N1N4 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.36■□□□□ 0.85
KRT78Q8N1N4 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
KRT78Q8N1N4 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.36■□□□□ 0.85
KRT78Q8N1N4 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
KRT78Q8N1N4 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
KRT78Q8N1N4 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
KRT78Q8N1N4 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
KRT78Q8N1N4 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
KRT78Q8N1N4 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
KRT78Q8N1N4 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
KRT78Q8N1N4 Z98882.1-201ENST00000622160 2253 ntBASIC20.36■□□□□ 0.85
KRT78Q8N1N4 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
KRT78Q8N1N4 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
KRT78Q8N1N4 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
KRT78Q8N1N4 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
KRT78Q8N1N4 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
KRT78Q8N1N4 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
KRT78Q8N1N4 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
KRT78Q8N1N4 AC123595.1-201ENST00000440769 1046 ntBASIC20.35■□□□□ 0.85
KRT78Q8N1N4 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.35■□□□□ 0.85
KRT78Q8N1N4 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
KRT78Q8N1N4 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20.35■□□□□ 0.85
KRT78Q8N1N4 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
KRT78Q8N1N4 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
KRT78Q8N1N4 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
KRT78Q8N1N4 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
KRT78Q8N1N4 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.35■□□□□ 0.85
KRT78Q8N1N4 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
KRT78Q8N1N4 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
KRT78Q8N1N4 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
KRT78Q8N1N4 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.34■□□□□ 0.85
KRT78Q8N1N4 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
KRT78Q8N1N4 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
KRT78Q8N1N4 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.34■□□□□ 0.85
KRT78Q8N1N4 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
KRT78Q8N1N4 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC20.34■□□□□ 0.85
KRT78Q8N1N4 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
KRT78Q8N1N4 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.34■□□□□ 0.85
KRT78Q8N1N4 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC20.34■□□□□ 0.85
KRT78Q8N1N4 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.34■□□□□ 0.85
KRT78Q8N1N4 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
KRT78Q8N1N4 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
KRT78Q8N1N4 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
KRT78Q8N1N4 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.34■□□□□ 0.85
KRT78Q8N1N4 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.34■□□□□ 0.85
KRT78Q8N1N4 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.34■□□□□ 0.85
KRT78Q8N1N4 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
KRT78Q8N1N4 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
KRT78Q8N1N4 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
KRT78Q8N1N4 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.33■□□□□ 0.85
KRT78Q8N1N4 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
KRT78Q8N1N4 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
KRT78Q8N1N4 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
KRT78Q8N1N4 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
KRT78Q8N1N4 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
KRT78Q8N1N4 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms