RNA–Protein interactions for RNA: ENST00000396148.1

CDKN2C-203, Transcript of cyclin dependent kinase inhibitor 2C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN2C, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2C-203ENST00000396148 NISCHQ9Y2I1 1504 aa47.07■■■■■ 5.13
CDKN2C-203ENST00000396148 CCDC180Q9P1Z9 1646 aa40.83■■■■■ 4.13
CDKN2C-203ENST00000396148 ZCCHC6Q5VYS8 1495 aaKnown RBP39.61■■■■□ 3.93
CDKN2C-203ENST00000396148 DCAF8L2P0C7V8 631 aa38.89■■■■□ 3.82
CDKN2C-203ENST00000396148 DCAF1Q9Y4B6 1507 aa38.86■■■■□ 3.81
CDKN2C-203ENST00000396148 SHROOM4Q9ULL8 1493 aa38.77■■■■□ 3.8
CDKN2C-203ENST00000396148 ABCC9O60706 1549 aa38.41■■■■□ 3.74
CDKN2C-203ENST00000396148 MYO15BQ96JP2 1530 aa38.25■■■■□ 3.71
CDKN2C-203ENST00000396148 NACADO15069 1562 aa37.96■■■■□ 3.67
CDKN2C-203ENST00000396148 SCRIBQ14160 1630 aa37.7■■■■□ 3.63
CDKN2C-203ENST00000396148 RB1CC1Q8TDY2 1594 aa37.57■■■■□ 3.6
CDKN2C-203ENST00000396148 SUPT5HO00267 1087 aaKnown RBP37.47■■■■□ 3.59
CDKN2C-203ENST00000396148 UNC13AQ9UPW8 1703 aa36.89■■■■□ 3.5
CDKN2C-203ENST00000396148 RSF1Q96T23 1441 aaPredicted RBP36.68■■■■□ 3.46
CDKN2C-203ENST00000396148 CECR2Q9BXF3 1484 aa36.61■■■■□ 3.45
CDKN2C-203ENST00000396148 BICRAQ9NZM4 1560 aa36.46■■■■□ 3.43
CDKN2C-203ENST00000396148 MROH2BQ7Z745 1585 aa36.42■■■■□ 3.42
CDKN2C-203ENST00000396148 PABPN1Q86U42 306 aaKnown RBP eCLIP36.33■■■■□ 3.41
CDKN2C-203ENST00000396148 BAZ1AQ9NRL2 1556 aaPredicted RBP36.31■■■■□ 3.4
CDKN2C-203ENST00000396148 WIZO95785 1651 aa36.16■■■■□ 3.38
CDKN2C-203ENST00000396148 SMARCA4P51532 1647 aa36.12■■■■□ 3.37
CDKN2C-203ENST00000396148 CHIC1Q5VXU3 224 aa36.01■■■■□ 3.36
CDKN2C-203ENST00000396148 TOP2AP11388 1531 aaKnown RBP35.73■■■■□ 3.31
CDKN2C-203ENST00000396148 PEG3Q9GZU2 1588 aa35.63■■■■□ 3.29
CDKN2C-203ENST00000396148 ATAD2BQ9ULI0 1458 aa35.44■■■■□ 3.26
CDKN2C-203ENST00000396148 SMARCA2P51531 1590 aa35.44■■■■□ 3.26
CDKN2C-203ENST00000396148 CCDC88BA6NC98 1476 aa35.41■■■■□ 3.26
CDKN2C-203ENST00000396148 EIF4G1Q04637 1599 aaKnown RBP35.34■■■■□ 3.25
CDKN2C-203ENST00000396148 BAZ1BQ9UIG0 1483 aaKnown RBP35.26■■■■□ 3.24
CDKN2C-203ENST00000396148 TRIM41Q8WV44 630 aa35.17■■■■□ 3.22
CDKN2C-203ENST00000396148 NCAPD3P42695 1498 aa35.05■■■■□ 3.2
CDKN2C-203ENST00000396148 HMGXB3Q12766 1538 aa35.02■■■■□ 3.2
CDKN2C-203ENST00000396148 ABCC8Q09428 1581 aa34.81■■■■□ 3.16
CDKN2C-203ENST00000396148 CC2D2AQ9P2K1 1620 aa34.74■■■■□ 3.15
CDKN2C-203ENST00000396148 LOC105371045A0A1W2PR82 267 aa34.7■■■■□ 3.15
CDKN2C-203ENST00000396148 FAM9AQ8IZU1 332 aaPredicted RBP34.59■■■■□ 3.13
CDKN2C-203ENST00000396148 WRNQ14191 1432 aaPredicted RBP eCLIP34.51■■■■□ 3.11
CDKN2C-203ENST00000396148 CFTRP13569 1480 aa34.39■■■■□ 3.1
CDKN2C-203ENST00000396148 SYNJ1O43426 1573 aa34.37■■■■□ 3.09
CDKN2C-203ENST00000396148 SOGA1O94964 1423 aa34.23■■■■□ 3.07
CDKN2C-203ENST00000396148 PRDM2Q13029 1718 aa34.22■■■■□ 3.07
CDKN2C-203ENST00000396148 CADPSQ9ULU8 1353 aa34.2■■■■□ 3.07
CDKN2C-203ENST00000396148 TOP2BQ02880 1626 aa34.17■■■■□ 3.06
CDKN2C-203ENST00000396148 EEA1Q15075 1411 aa34.15■■■■□ 3.06
CDKN2C-203ENST00000396148 EHMT2Q96KQ7 1210 aa34.15■■■■□ 3.06
CDKN2C-203ENST00000396148 BIVM-ERCC5R4GMW8 1640 aa34.12■■■■□ 3.05
CDKN2C-203ENST00000396148 RUSC2Q8N2Y8 1516 aa34.1■■■■□ 3.05
CDKN2C-203ENST00000396148 CUX1P39880 1505 aa34.02■■■■□ 3.04
CDKN2C-203ENST00000396148 CSRNP3Q8WYN3 585 aa34■■■■□ 3.03
CDKN2C-203ENST00000396148 NESP48681 1621 aa33.84■■■■□ 3.01
CDKN2C-203ENST00000396148 DNAJC5BQ9UF47 199 aa33.84■■■■□ 3.01
CDKN2C-203ENST00000396148 FANCD2Q9BXW9 1451 aa33.84■■■■□ 3.01
CDKN2C-203ENST00000396148 LAMC3Q9Y6N6 1575 aa33.79■■■■□ 3
CDKN2C-203ENST00000396148 GOLGA3Q08378 1498 aa33.73■■■□□ 2.99
CDKN2C-203ENST00000396148 KIF21BO75037 1637 aa33.71■■■□□ 2.99
CDKN2C-203ENST00000396148 TNIKQ9UKE5 1360 aa33.7■■■□□ 2.98
CDKN2C-203ENST00000396148 CEP164Q9UPV0 1460 aa33.7■■■□□ 2.98
CDKN2C-203ENST00000396148 UBTFP17480 764 aaKnown RBP33.63■■■□□ 2.97
CDKN2C-203ENST00000396148 FGD5Q6ZNL6 1462 aa33.59■■■□□ 2.97
CDKN2C-203ENST00000396148 KIF27Q86VH2 1401 aa33.59■■■□□ 2.97
CDKN2C-203ENST00000396148 DNMBPQ6XZF7 1577 aa33.57■■■□□ 2.96
CDKN2C-203ENST00000396148 CEP162Q5TB80 1403 aa33.57■■■□□ 2.96
CDKN2C-203ENST00000396148 PDS5BQ9NTI5 1447 aa33.54■■■□□ 2.96
CDKN2C-203ENST00000396148 RAPGEF2Q9Y4G8 1499 aa33.51■■■□□ 2.95
CDKN2C-203ENST00000396148 TOPBP1Q92547 1522 aa33.51■■■□□ 2.95
CDKN2C-203ENST00000396148 PCGF6Q9BYE7 350 aa33.48■■■□□ 2.95
CDKN2C-203ENST00000396148 PRXQ9BXM0 1461 aa33.46■■■□□ 2.95
CDKN2C-203ENST00000396148 CUX2O14529 1486 aa33.45■■■□□ 2.94
CDKN2C-203ENST00000396148 KIF21AQ7Z4S6 1674 aa33.41■■■□□ 2.94
CDKN2C-203ENST00000396148 ERICH3Q5RHP9 1530 aa33.41■■■□□ 2.94
CDKN2C-203ENST00000396148 URB2Q14146 1524 aaKnown RBP33.4■■■□□ 2.94
CDKN2C-203ENST00000396148 POLA1P09884 1462 aaPredicted RBP33.38■■■□□ 2.93
CDKN2C-203ENST00000396148 TRIM26Q12899 539 aaPredicted RBP33.33■■■□□ 2.93
CDKN2C-203ENST00000396148 RAD54L2Q9Y4B4 1467 aa33.31■■■□□ 2.92
CDKN2C-203ENST00000396148 IGF1RP08069 1367 aa33.28■■■□□ 2.92
CDKN2C-203ENST00000396148 ABCA10Q8WWZ4 1543 aa33.27■■■□□ 2.92
CDKN2C-203ENST00000396148 CLIP1P30622 1438 aa33.22■■■□□ 2.91
CDKN2C-203ENST00000396148 WDR97A6NE52 1622 aa33.14■■■□□ 2.9
CDKN2C-203ENST00000396148 CARMIL1Q5VZK9 1371 aa33.12■■■□□ 2.89
CDKN2C-203ENST00000396148 MRC2Q9UBG0 1479 aa33.09■■■□□ 2.89
CDKN2C-203ENST00000396148 PPARGC1BQ86YN6 1023 aaKnown RBP33.08■■■□□ 2.89
CDKN2C-203ENST00000396148 RANGAP1P46060 587 aaPredicted RBP33.05■■■□□ 2.88
CDKN2C-203ENST00000396148 ABCA5Q8WWZ7 1642 aa32.98■■■□□ 2.87
CDKN2C-203ENST00000396148 TARBP1Q13395 1621 aaKnown RBP32.97■■■□□ 2.87
CDKN2C-203ENST00000396148 VPS8Q8N3P4 1428 aa32.97■■■□□ 2.87
CDKN2C-203ENST00000396148 TDRD9Q8NDG6 1382 aaKnown RBP32.96■■■□□ 2.87
CDKN2C-203ENST00000396148 CUL7Q14999 1698 aa32.95■■■□□ 2.87
CDKN2C-203ENST00000396148 GAPVD1Q14C86 1478 aa32.91■■■□□ 2.86
CDKN2C-203ENST00000396148 WDR62O43379 1518 aa32.9■■■□□ 2.86
CDKN2C-203ENST00000396148 ERCC6Q03468 1493 aa32.87■■■□□ 2.85
CDKN2C-203ENST00000396148 ARAP1Q96P48 1450 aa32.86■■■□□ 2.85
CDKN2C-203ENST00000396148 ARHGAP35Q9NRY4 1499 aa32.79■■■□□ 2.84
CDKN2C-203ENST00000396148 HRCP23327 699 aa32.76■■■□□ 2.83
CDKN2C-203ENST00000396148 TTBK1Q5TCY1 1321 aaPredicted RBP32.75■■■□□ 2.83
CDKN2C-203ENST00000396148 IFT140Q96RY7 1462 aa32.73■■■□□ 2.83
CDKN2C-203ENST00000396148 THOC2Q8NI27 1593 aaKnown RBP32.73■■■□□ 2.83
CDKN2C-203ENST00000396148 PBRM1Q86U86 1689 aa32.7■■■□□ 2.83
CDKN2C-203ENST00000396148 AQRO60306 1485 aaKnown RBP eCLIP32.69■■■□□ 2.82
CDKN2C-203ENST00000396148 APLP2Q06481 763 aa32.68■■■□□ 2.82
CDKN2C-203ENST00000396148 CTTNBP2Q8WZ74 1663 aa32.66■■■□□ 2.82
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms