RNA–Protein interactions for RNA: ENST00000536120.5

ECHDC2-221, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 3 BASIC

Gene ECHDC2, Length 1,446 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-221ENST00000536120 NISCHQ9Y2I1 1504 aa50.66■■■■■ 5.7
ECHDC2-221ENST00000536120 CCDC180Q9P1Z9 1646 aa44.65■■■■■ 4.74
ECHDC2-221ENST00000536120 ABCC9O60706 1549 aa43.2■■■■■ 4.51
ECHDC2-221ENST00000536120 ZCCHC6Q5VYS8 1495 aaKnown RBP42.33■■■■■ 4.37
ECHDC2-221ENST00000536120 DCAF8L2P0C7V8 631 aa42.07■■■■■ 4.33
ECHDC2-221ENST00000536120 DCAF1Q9Y4B6 1507 aa41.91■■■■■ 4.3
ECHDC2-221ENST00000536120 NACADO15069 1562 aa41.88■■■■■ 4.29
ECHDC2-221ENST00000536120 MYO15BQ96JP2 1530 aa41.85■■■■■ 4.29
ECHDC2-221ENST00000536120 RB1CC1Q8TDY2 1594 aa41.75■■■■■ 4.27
ECHDC2-221ENST00000536120 SCRIBQ14160 1630 aa40.84■■■■■ 4.13
ECHDC2-221ENST00000536120 UNC13AQ9UPW8 1703 aa40.81■■■■■ 4.12
ECHDC2-221ENST00000536120 BICRAQ9NZM4 1560 aa40.56■■■■■ 4.08
ECHDC2-221ENST00000536120 PABPN1Q86U42 306 aaKnown RBP eCLIP40.53■■■■■ 4.087e-7■□□□□ 10.8
ECHDC2-221ENST00000536120 SHROOM4Q9ULL8 1493 aa40.42■■■■■ 4.06
ECHDC2-221ENST00000536120 CECR2Q9BXF3 1484 aa39.45■■■■□ 3.91
ECHDC2-221ENST00000536120 EIF4G1Q04637 1599 aaKnown RBP39.4■■■■□ 3.9
ECHDC2-221ENST00000536120 DNAJC5BQ9UF47 199 aa39.22■■■■□ 3.87
ECHDC2-221ENST00000536120 BAZ1AQ9NRL2 1556 aaPredicted RBP39.16■■■■□ 3.86
ECHDC2-221ENST00000536120 SMARCA4P51532 1647 aa39.13■■■■□ 3.85
ECHDC2-221ENST00000536120 MROH2BQ7Z745 1585 aa39.08■■■■□ 3.85
ECHDC2-221ENST00000536120 CC2D2AQ9P2K1 1620 aa39.07■■■■□ 3.85
ECHDC2-221ENST00000536120 RSF1Q96T23 1441 aaPredicted RBP38.87■■■■□ 3.81
ECHDC2-221ENST00000536120 ATAD2BQ9ULI0 1458 aa38.82■■■■□ 3.8
ECHDC2-221ENST00000536120 PEG3Q9GZU2 1588 aa38.76■■■■□ 3.8
ECHDC2-221ENST00000536120 SMARCA2P51531 1590 aa38.72■■■■□ 3.79
ECHDC2-221ENST00000536120 NCAPD3P42695 1498 aa38.7■■■■□ 3.79
ECHDC2-221ENST00000536120 WIZO95785 1651 aa38.64■■■■□ 3.78
ECHDC2-221ENST00000536120 HMGXB3Q12766 1538 aa38.5■■■■□ 3.75
ECHDC2-221ENST00000536120 BAZ1BQ9UIG0 1483 aaKnown RBP38.48■■■■□ 3.75
ECHDC2-221ENST00000536120 SUPT5HO00267 1087 aaKnown RBP38.34■■■■□ 3.73
ECHDC2-221ENST00000536120 TOP2AP11388 1531 aaKnown RBP38.26■■■■□ 3.71
ECHDC2-221ENST00000536120 CCDC88BA6NC98 1476 aa37.86■■■■□ 3.65
ECHDC2-221ENST00000536120 CADPSQ9ULU8 1353 aa37.61■■■■□ 3.61
ECHDC2-221ENST00000536120 NESP48681 1621 aa37.6■■■■□ 3.61
ECHDC2-221ENST00000536120 CFTRP13569 1480 aa37.51■■■■□ 3.6
ECHDC2-221ENST00000536120 LAMC3Q9Y6N6 1575 aa37.5■■■■□ 3.59
ECHDC2-221ENST00000536120 PDS5BQ9NTI5 1447 aa37.26■■■■□ 3.55
ECHDC2-221ENST00000536120 FANCD2Q9BXW9 1451 aa37.15■■■■□ 3.54
ECHDC2-221ENST00000536120 PRDM2Q13029 1718 aa37.13■■■■□ 3.53
ECHDC2-221ENST00000536120 ERCC6Q03468 1493 aa37.12■■■■□ 3.53
ECHDC2-221ENST00000536120 KIF21AQ7Z4S6 1674 aa37.08■■■■□ 3.53
ECHDC2-221ENST00000536120 CEP164Q9UPV0 1460 aa37.01■■■■□ 3.51
ECHDC2-221ENST00000536120 MRC2Q9UBG0 1479 aa36.85■■■■□ 3.49
ECHDC2-221ENST00000536120 THOC2Q8NI27 1593 aaKnown RBP36.83■■■■□ 3.49
ECHDC2-221ENST00000536120 URB2Q14146 1524 aaKnown RBP36.77■■■■□ 3.48
ECHDC2-221ENST00000536120 WDR62O43379 1518 aa36.7■■■■□ 3.47
ECHDC2-221ENST00000536120 ABCC8Q09428 1581 aa36.64■■■■□ 3.46
ECHDC2-221ENST00000536120 TOPBP1Q92547 1522 aa36.63■■■■□ 3.45
ECHDC2-221ENST00000536120 CUX1P39880 1505 aa36.61■■■■□ 3.45
ECHDC2-221ENST00000536120 DNMBPQ6XZF7 1577 aa36.6■■■■□ 3.45
ECHDC2-221ENST00000536120 WRNQ14191 1432 aaPredicted RBP eCLIP36.59■■■■□ 3.45
ECHDC2-221ENST00000536120 CUX2O14529 1486 aa36.52■■■■□ 3.44
ECHDC2-221ENST00000536120 SYNJ1O43426 1573 aa36.46■■■■□ 3.43
ECHDC2-221ENST00000536120 TOP2BQ02880 1626 aa36.41■■■■□ 3.42
ECHDC2-221ENST00000536120 BIVM-ERCC5R4GMW8 1640 aa36.38■■■■□ 3.41
ECHDC2-221ENST00000536120 POLA1P09884 1462 aaPredicted RBP36.37■■■■□ 3.41
ECHDC2-221ENST00000536120 FGD5Q6ZNL6 1462 aa36.37■■■■□ 3.41
ECHDC2-221ENST00000536120 RAD54L2Q9Y4B4 1467 aa36.23■■■■□ 3.39
ECHDC2-221ENST00000536120 SOGA1O94964 1423 aa36.23■■■■□ 3.39
ECHDC2-221ENST00000536120 IFT140Q96RY7 1462 aa36.23■■■■□ 3.39
ECHDC2-221ENST00000536120 CHIC1Q5VXU3 224 aa36.2■■■■□ 3.39
ECHDC2-221ENST00000536120 TARBP1Q13395 1621 aaKnown RBP36.18■■■■□ 3.38
ECHDC2-221ENST00000536120 TRIM41Q8WV44 630 aa36.16■■■■□ 3.38
ECHDC2-221ENST00000536120 ZNF608Q9ULD9 1512 aaPredicted RBP36.06■■■■□ 3.36
ECHDC2-221ENST00000536120 ABCA10Q8WWZ4 1543 aa36.04■■■■□ 3.36
ECHDC2-221ENST00000536120 WDR97A6NE52 1622 aa35.99■■■■□ 3.35
ECHDC2-221ENST00000536120 TDRD9Q8NDG6 1382 aaKnown RBP35.98■■■■□ 3.35
ECHDC2-221ENST00000536120 AQRO60306 1485 aaKnown RBP eCLIP35.95■■■■□ 3.353e-6■■■□□ 18.1
ECHDC2-221ENST00000536120 EIF4G3O43432 1585 aaKnown RBP35.87■■■■□ 3.33
ECHDC2-221ENST00000536120 ABCA5Q8WWZ7 1642 aa35.82■■■■□ 3.32
ECHDC2-221ENST00000536120 GAPVD1Q14C86 1478 aa35.81■■■■□ 3.32
ECHDC2-221ENST00000536120 KIF27Q86VH2 1401 aa35.75■■■■□ 3.31
ECHDC2-221ENST00000536120 RUSC2Q8N2Y8 1516 aa35.72■■■■□ 3.31
ECHDC2-221ENST00000536120 GRIN2BQ13224 1484 aa35.71■■■■□ 3.31
ECHDC2-221ENST00000536120 IGF1RP08069 1367 aa35.62■■■■□ 3.29
ECHDC2-221ENST00000536120 PBRM1Q86U86 1689 aa35.61■■■■□ 3.29
ECHDC2-221ENST00000536120 ERICH3Q5RHP9 1530 aa35.59■■■■□ 3.29
ECHDC2-221ENST00000536120 SNAPC4Q5SXM2 1469 aa35.58■■■■□ 3.29
ECHDC2-221ENST00000536120 MAGI1Q96QZ7 1491 aaPredicted RBP35.53■■■■□ 3.28
ECHDC2-221ENST00000536120 EEA1Q15075 1411 aa35.46■■■■□ 3.27
ECHDC2-221ENST00000536120 ADAMTS12P58397 1594 aa35.43■■■■□ 3.26
ECHDC2-221ENST00000536120 FHAD1B1AJZ9 1412 aa35.42■■■■□ 3.26
ECHDC2-221ENST00000536120 FAM9AQ8IZU1 332 aaPredicted RBP35.42■■■■□ 3.26
ECHDC2-221ENST00000536120 CSRNP3Q8WYN3 585 aa35.4■■■■□ 3.26
ECHDC2-221ENST00000536120 SYNJ2O15056 1496 aa35.4■■■■□ 3.26
ECHDC2-221ENST00000536120 CARMIL1Q5VZK9 1371 aa35.38■■■■□ 3.25
ECHDC2-221ENST00000536120 FBLN2P98095 1184 aa35.35■■■■□ 3.25
ECHDC2-221ENST00000536120 CHMP7Q8WUX9 453 aaPredicted RBP35.35■■■■□ 3.25
ECHDC2-221ENST00000536120 CUL7Q14999 1698 aa35.34■■■■□ 3.25
ECHDC2-221ENST00000536120 PRXQ9BXM0 1461 aa35.28■■■■□ 3.24
ECHDC2-221ENST00000536120 CHD1O14646 1710 aa35.28■■■■□ 3.24
ECHDC2-221ENST00000536120 GRIN2AQ12879 1464 aa35.26■■■■□ 3.24
ECHDC2-221ENST00000536120 RAPGEF2Q9Y4G8 1499 aa35.21■■■■□ 3.23
ECHDC2-221ENST00000536120 OSCARQ8IYS5 282 aa35.17■■■■□ 3.22
ECHDC2-221ENST00000536120 NUP160Q12769 1436 aa35.1■■■■□ 3.21
ECHDC2-221ENST00000536120 CEP170Q5SW79 1584 aa35.07■■■■□ 3.2
ECHDC2-221ENST00000536120 KIF21BO75037 1637 aa35.05■■■■□ 3.2
ECHDC2-221ENST00000536120 CLASP1Q7Z460 1538 aa34.97■■■■□ 3.19
ECHDC2-221ENST00000536120 EHMT2Q96KQ7 1210 aa34.91■■■■□ 3.18
ECHDC2-221ENST00000536120 KIAA0586Q9BVV6 1533 aa34.9■■■■□ 3.18
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms