RNA–Protein interactions for RNA: ENST00000396641.6

LRRC3B-201, Transcript of leucine rich repeat containing 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC3B, Length 1,696 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3B-201ENST00000396641 NISCHQ9Y2I1 1504 aa49.1■■■■■ 5.45
LRRC3B-201ENST00000396641 CCDC180Q9P1Z9 1646 aa43.12■■■■■ 4.49
LRRC3B-201ENST00000396641 ABCC9O60706 1549 aa41.19■■■■■ 4.19
LRRC3B-201ENST00000396641 ZCCHC6Q5VYS8 1495 aaKnown RBP41.12■■■■■ 4.17
LRRC3B-201ENST00000396641 DCAF1Q9Y4B6 1507 aa40.69■■■■■ 4.1
LRRC3B-201ENST00000396641 DCAF8L2P0C7V8 631 aa40.66■■■■■ 4.1
LRRC3B-201ENST00000396641 MYO15BQ96JP2 1530 aa40.48■■■■■ 4.07
LRRC3B-201ENST00000396641 NACADO15069 1562 aa40.34■■■■■ 4.05
LRRC3B-201ENST00000396641 RB1CC1Q8TDY2 1594 aa40.1■■■■■ 4.01
LRRC3B-201ENST00000396641 SHROOM4Q9ULL8 1493 aa39.45■■■■□ 3.91
LRRC3B-201ENST00000396641 SCRIBQ14160 1630 aa39.43■■■■□ 3.9
LRRC3B-201ENST00000396641 UNC13AQ9UPW8 1703 aa39.14■■■■□ 3.86
LRRC3B-201ENST00000396641 BICRAQ9NZM4 1560 aa38.83■■■■□ 3.81
LRRC3B-201ENST00000396641 PABPN1Q86U42 306 aaKnown RBP eCLIP38.72■■■■□ 3.79
LRRC3B-201ENST00000396641 CECR2Q9BXF3 1484 aa38.12■■■■□ 3.69
LRRC3B-201ENST00000396641 BAZ1AQ9NRL2 1556 aaPredicted RBP37.98■■■■□ 3.67
LRRC3B-201ENST00000396641 MROH2BQ7Z745 1585 aa37.85■■■■□ 3.65
LRRC3B-201ENST00000396641 RSF1Q96T23 1441 aaPredicted RBP37.85■■■■□ 3.65
LRRC3B-201ENST00000396641 SMARCA4P51532 1647 aa37.84■■■■□ 3.65
LRRC3B-201ENST00000396641 SUPT5HO00267 1087 aaKnown RBP37.73■■■■□ 3.63
LRRC3B-201ENST00000396641 EIF4G1Q04637 1599 aaKnown RBP37.73■■■■□ 3.63
LRRC3B-201ENST00000396641 PEG3Q9GZU2 1588 aa37.48■■■■□ 3.59
LRRC3B-201ENST00000396641 WIZO95785 1651 aa37.48■■■■□ 3.59
LRRC3B-201ENST00000396641 ATAD2BQ9ULI0 1458 aa37.4■■■■□ 3.58
LRRC3B-201ENST00000396641 SMARCA2P51531 1590 aa37.4■■■■□ 3.58
LRRC3B-201ENST00000396641 CC2D2AQ9P2K1 1620 aa37.3■■■■□ 3.56
LRRC3B-201ENST00000396641 NCAPD3P42695 1498 aa37.24■■■■□ 3.55
LRRC3B-201ENST00000396641 TOP2AP11388 1531 aaKnown RBP37.15■■■■□ 3.54
LRRC3B-201ENST00000396641 BAZ1BQ9UIG0 1483 aaKnown RBP37.14■■■■□ 3.54
LRRC3B-201ENST00000396641 HMGXB3Q12766 1538 aa37.11■■■■□ 3.53
LRRC3B-201ENST00000396641 DNAJC5BQ9UF47 199 aa36.87■■■■□ 3.49
LRRC3B-201ENST00000396641 CCDC88BA6NC98 1476 aa36.74■■■■□ 3.47
LRRC3B-201ENST00000396641 CADPSQ9ULU8 1353 aa36.23■■■■□ 3.39
LRRC3B-201ENST00000396641 CFTRP13569 1480 aa36.22■■■■□ 3.39
LRRC3B-201ENST00000396641 LAMC3Q9Y6N6 1575 aa36.04■■■■□ 3.36
LRRC3B-201ENST00000396641 NESP48681 1621 aa35.97■■■■□ 3.35
LRRC3B-201ENST00000396641 PRDM2Q13029 1718 aa35.93■■■■□ 3.34
LRRC3B-201ENST00000396641 CHIC1Q5VXU3 224 aa35.87■■■■□ 3.33
LRRC3B-201ENST00000396641 PDS5BQ9NTI5 1447 aa35.81■■■■□ 3.32
LRRC3B-201ENST00000396641 FANCD2Q9BXW9 1451 aa35.77■■■■□ 3.32
LRRC3B-201ENST00000396641 ABCC8Q09428 1581 aa35.69■■■■□ 3.3
LRRC3B-201ENST00000396641 WRNQ14191 1432 aaPredicted RBP eCLIP35.65■■■■□ 3.3
LRRC3B-201ENST00000396641 CEP164Q9UPV0 1460 aa35.61■■■■□ 3.29
LRRC3B-201ENST00000396641 TRIM41Q8WV44 630 aa35.61■■■■□ 3.29
LRRC3B-201ENST00000396641 KIF21AQ7Z4S6 1674 aa35.52■■■■□ 3.28
LRRC3B-201ENST00000396641 SYNJ1O43426 1573 aa35.44■■■■□ 3.26
LRRC3B-201ENST00000396641 ERCC6Q03468 1493 aa35.44■■■■□ 3.26
LRRC3B-201ENST00000396641 CUX1P39880 1505 aa35.43■■■■□ 3.26
LRRC3B-201ENST00000396641 TOP2BQ02880 1626 aa35.43■■■■□ 3.26
LRRC3B-201ENST00000396641 BIVM-ERCC5R4GMW8 1640 aa35.39■■■■□ 3.26
LRRC3B-201ENST00000396641 DNMBPQ6XZF7 1577 aa35.35■■■■□ 3.25
LRRC3B-201ENST00000396641 MRC2Q9UBG0 1479 aa35.33■■■■□ 3.25
LRRC3B-201ENST00000396641 URB2Q14146 1524 aaKnown RBP35.32■■■■□ 3.24
LRRC3B-201ENST00000396641 TOPBP1Q92547 1522 aa35.31■■■■□ 3.24
LRRC3B-201ENST00000396641 WDR62O43379 1518 aa35.17■■■■□ 3.22
LRRC3B-201ENST00000396641 FGD5Q6ZNL6 1462 aa35.15■■■■□ 3.22
LRRC3B-201ENST00000396641 THOC2Q8NI27 1593 aaKnown RBP35.14■■■■□ 3.22
LRRC3B-201ENST00000396641 POLA1P09884 1462 aaPredicted RBP35.09■■■■□ 3.21
LRRC3B-201ENST00000396641 SOGA1O94964 1423 aa35■■■■□ 3.19
LRRC3B-201ENST00000396641 RAD54L2Q9Y4B4 1467 aa34.92■■■■□ 3.18
LRRC3B-201ENST00000396641 EEA1Q15075 1411 aa34.9■■■■□ 3.18
LRRC3B-201ENST00000396641 CUX2O14529 1486 aa34.89■■■■□ 3.18
LRRC3B-201ENST00000396641 ABCA10Q8WWZ4 1543 aa34.89■■■■□ 3.18
LRRC3B-201ENST00000396641 IFT140Q96RY7 1462 aa34.84■■■■□ 3.17
LRRC3B-201ENST00000396641 KIF27Q86VH2 1401 aa34.84■■■■□ 3.17
LRRC3B-201ENST00000396641 FAM9AQ8IZU1 332 aaPredicted RBP34.82■■■■□ 3.16
LRRC3B-201ENST00000396641 TARBP1Q13395 1621 aaKnown RBP34.81■■■■□ 3.16
LRRC3B-201ENST00000396641 RUSC2Q8N2Y8 1516 aa34.81■■■■□ 3.16
LRRC3B-201ENST00000396641 WDR97A6NE52 1622 aa34.75■■■■□ 3.15
LRRC3B-201ENST00000396641 CSRNP3Q8WYN3 585 aa34.73■■■■□ 3.15
LRRC3B-201ENST00000396641 TDRD9Q8NDG6 1382 aaKnown RBP34.66■■■■□ 3.14
LRRC3B-201ENST00000396641 ABCA5Q8WWZ7 1642 aa34.6■■■■□ 3.13
LRRC3B-201ENST00000396641 GAPVD1Q14C86 1478 aa34.6■■■■□ 3.13
LRRC3B-201ENST00000396641 IGF1RP08069 1367 aa34.58■■■■□ 3.13
LRRC3B-201ENST00000396641 ZNF608Q9ULD9 1512 aaPredicted RBP34.57■■■■□ 3.12
LRRC3B-201ENST00000396641 AQRO60306 1485 aaKnown RBP eCLIP34.54■■■■□ 3.12
LRRC3B-201ENST00000396641 ERICH3Q5RHP9 1530 aa34.49■■■■□ 3.11
LRRC3B-201ENST00000396641 EIF4G3O43432 1585 aaKnown RBP34.44■■■■□ 3.1
LRRC3B-201ENST00000396641 GRIN2BQ13224 1484 aa34.44■■■■□ 3.1
LRRC3B-201ENST00000396641 PRXQ9BXM0 1461 aa34.43■■■■□ 3.1
LRRC3B-201ENST00000396641 LOC105371045A0A1W2PR82 267 aa34.4■■■■□ 3.1
LRRC3B-201ENST00000396641 KIF21BO75037 1637 aa34.4■■■■□ 3.1
LRRC3B-201ENST00000396641 CARMIL1Q5VZK9 1371 aa34.4■■■■□ 3.1
LRRC3B-201ENST00000396641 PBRM1Q86U86 1689 aa34.37■■■■□ 3.09
LRRC3B-201ENST00000396641 CUL7Q14999 1698 aa34.35■■■■□ 3.09
LRRC3B-201ENST00000396641 GOLGA3Q08378 1498 aa34.31■■■■□ 3.08
LRRC3B-201ENST00000396641 RAPGEF2Q9Y4G8 1499 aa34.29■■■■□ 3.08
LRRC3B-201ENST00000396641 EHMT2Q96KQ7 1210 aa34.26■■■■□ 3.08
LRRC3B-201ENST00000396641 FHAD1B1AJZ9 1412 aa34.24■■■■□ 3.07
LRRC3B-201ENST00000396641 MAGI1Q96QZ7 1491 aaPredicted RBP34.23■■■■□ 3.07
LRRC3B-201ENST00000396641 SNAPC4Q5SXM2 1469 aa34.22■■■■□ 3.07
LRRC3B-201ENST00000396641 ADAMTS12P58397 1594 aa34.19■■■■□ 3.06
LRRC3B-201ENST00000396641 UBTFP17480 764 aaKnown RBP34.19■■■■□ 3.06
LRRC3B-201ENST00000396641 TNIKQ9UKE5 1360 aa34.13■■■■□ 3.05
LRRC3B-201ENST00000396641 SYNJ2O15056 1496 aa34.09■■■■□ 3.05
LRRC3B-201ENST00000396641 CHMP7Q8WUX9 453 aaPredicted RBP34.04■■■■□ 3.04
LRRC3B-201ENST00000396641 GRIN2AQ12879 1464 aa33.98■■■■□ 3.03
LRRC3B-201ENST00000396641 FBLN2P98095 1184 aa33.95■■■■□ 3.03
LRRC3B-201ENST00000396641 CEP162Q5TB80 1403 aa33.82■■■■□ 3
LRRC3B-201ENST00000396641 CTTNBP2Q8WZ74 1663 aa33.82■■■■□ 3
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms