RNA–Protein interactions for RNA: ENST00000368589.5

JTB-203, Transcript of jumping translocation breakpoint, humanhuman

TSL 2 BASIC

Gene JTB, Length 1,216 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
JTB-203ENST00000368589 NISCHQ9Y2I1 1504 aa54.16■■■■■ 6.26
JTB-203ENST00000368589 CCDC180Q9P1Z9 1646 aa48.4■■■■■ 5.34
JTB-203ENST00000368589 ABCC9O60706 1549 aa48.16■■■■■ 5.3
JTB-203ENST00000368589 RB1CC1Q8TDY2 1594 aa45.93■■■■■ 4.94
JTB-203ENST00000368589 NACADO15069 1562 aa45.71■■■■■ 4.91
JTB-203ENST00000368589 DCAF8L2P0C7V8 631 aa45.62■■■■■ 4.89
JTB-203ENST00000368589 MYO15BQ96JP2 1530 aa45.18■■■■■ 4.82
JTB-203ENST00000368589 DNAJC5BQ9UF47 199 aa44.99■■■■■ 4.79
JTB-203ENST00000368589 UNC13AQ9UPW8 1703 aa44.95■■■■■ 4.79
JTB-203ENST00000368589 PABPN1Q86U42 306 aaKnown RBP eCLIP44.93■■■■■ 4.78
JTB-203ENST00000368589 ZCCHC6Q5VYS8 1495 aaKnown RBP44.92■■■■■ 4.78
JTB-203ENST00000368589 DCAF1Q9Y4B6 1507 aa44.73■■■■■ 4.75
JTB-203ENST00000368589 BICRAQ9NZM4 1560 aa44.65■■■■■ 4.74
JTB-203ENST00000368589 SCRIBQ14160 1630 aa44.15■■■■■ 4.66
JTB-203ENST00000368589 SHROOM4Q9ULL8 1493 aa43.97■■■■■ 4.63
JTB-203ENST00000368589 CC2D2AQ9P2K1 1620 aa43.51■■■■■ 4.56
JTB-203ENST00000368589 EIF4G1Q04637 1599 aaKnown RBP43.49■■■■■ 4.55
JTB-203ENST00000368589 CECR2Q9BXF3 1484 aa43.32■■■■■ 4.53
JTB-203ENST00000368589 NCAPD3P42695 1498 aa42.23■■■■■ 4.35
JTB-203ENST00000368589 SMARCA4P51532 1647 aa42.16■■■■■ 4.34
JTB-203ENST00000368589 ATAD2BQ9ULI0 1458 aa42.14■■■■■ 4.34
JTB-203ENST00000368589 SMARCA2P51531 1590 aa42.01■■■■■ 4.32
JTB-203ENST00000368589 BAZ1AQ9NRL2 1556 aaPredicted RBP41.98■■■■■ 4.31
JTB-203ENST00000368589 HMGXB3Q12766 1538 aa41.9■■■■■ 4.3
JTB-203ENST00000368589 MROH2BQ7Z745 1585 aa41.76■■■■■ 4.27
JTB-203ENST00000368589 PEG3Q9GZU2 1588 aa41.75■■■■■ 4.27
JTB-203ENST00000368589 BAZ1BQ9UIG0 1483 aaKnown RBP41.72■■■■■ 4.27
JTB-203ENST00000368589 ERCC6Q03468 1493 aa41.5■■■■■ 4.23
JTB-203ENST00000368589 NESP48681 1621 aa41.48■■■■■ 4.23
JTB-203ENST00000368589 CUX2O14529 1486 aa41.33■■■■■ 4.21
JTB-203ENST00000368589 WIZO95785 1651 aa41.26■■■■■ 4.2
JTB-203ENST00000368589 LAMC3Q9Y6N6 1575 aa41.19■■■■■ 4.18
JTB-203ENST00000368589 DNAJC5Q9H3Z4 198 aa41.04■■■■■ 4.16
JTB-203ENST00000368589 RSF1Q96T23 1441 aaPredicted RBP41.01■■■■■ 4.16
JTB-203ENST00000368589 CADPSQ9ULU8 1353 aa40.97■■■■■ 4.15
JTB-203ENST00000368589 THOC2Q8NI27 1593 aaKnown RBP40.95■■■■■ 4.15
JTB-203ENST00000368589 PDS5BQ9NTI5 1447 aa40.94■■■■■ 4.14
JTB-203ENST00000368589 KIF21AQ7Z4S6 1674 aa40.93■■■■■ 4.14
JTB-203ENST00000368589 TOP2AP11388 1531 aaKnown RBP40.72■■■■■ 4.11
JTB-203ENST00000368589 MRC2Q9UBG0 1479 aa40.57■■■■■ 4.08
JTB-203ENST00000368589 CFTRP13569 1480 aa40.56■■■■■ 4.08
JTB-203ENST00000368589 FANCD2Q9BXW9 1451 aa40.47■■■■■ 4.07
JTB-203ENST00000368589 CEP164Q9UPV0 1460 aa40.46■■■■■ 4.07
JTB-203ENST00000368589 WDR62O43379 1518 aa40.46■■■■■ 4.07
JTB-203ENST00000368589 CCDC88BA6NC98 1476 aa40.31■■■■■ 4.04
JTB-203ENST00000368589 URB2Q14146 1524 aaKnown RBP40.14■■■■■ 4.02
JTB-203ENST00000368589 PRDM2Q13029 1718 aa40.13■■■■■ 4.02
JTB-203ENST00000368589 TOPBP1Q92547 1522 aa39.75■■■■□ 3.95
JTB-203ENST00000368589 ABCC8Q09428 1581 aa39.67■■■■□ 3.94
JTB-203ENST00000368589 IFT140Q96RY7 1462 aa39.65■■■■□ 3.94
JTB-203ENST00000368589 DNMBPQ6XZF7 1577 aa39.61■■■■□ 3.93
JTB-203ENST00000368589 ZNF608Q9ULD9 1512 aaPredicted RBP39.6■■■■□ 3.93
JTB-203ENST00000368589 OSCARQ8IYS5 282 aa39.56■■■■□ 3.92
JTB-203ENST00000368589 SUPT5HO00267 1087 aaKnown RBP39.45■■■■□ 3.91
JTB-203ENST00000368589 TARBP1Q13395 1621 aaKnown RBP39.39■■■■□ 3.9
JTB-203ENST00000368589 POLA1P09884 1462 aaPredicted RBP39.37■■■■□ 3.89
JTB-203ENST00000368589 EIF4G3O43432 1585 aaKnown RBP39.35■■■■□ 3.89
JTB-203ENST00000368589 TRIM41Q8WV44 630 aa39.34■■■■□ 3.89
JTB-203ENST00000368589 AQRO60306 1485 aaKnown RBP eCLIP39.3■■■■□ 3.882e-8■■■■■ 35
JTB-203ENST00000368589 RAD54L2Q9Y4B4 1467 aa39.24■■■■□ 3.87
JTB-203ENST00000368589 SOGA1O94964 1423 aa39.22■■■■□ 3.87
JTB-203ENST00000368589 CUX1P39880 1505 aa39.19■■■■□ 3.86
JTB-203ENST00000368589 FGD5Q6ZNL6 1462 aa39.17■■■■□ 3.86
JTB-203ENST00000368589 TDRD9Q8NDG6 1382 aaKnown RBP39.11■■■■□ 3.85
JTB-203ENST00000368589 CHD1O14646 1710 aa39.03■■■■□ 3.84
JTB-203ENST00000368589 RIMBP3CA6NJZ7 1639 aa38.98■■■■□ 3.83
JTB-203ENST00000368589 RIMBP3BA6NNM3 1639 aa38.98■■■■□ 3.83
JTB-203ENST00000368589 RIMBP3Q9UFD9 1639 aa38.98■■■■□ 3.83
JTB-203ENST00000368589 FBLN2P98095 1184 aa38.96■■■■□ 3.83
JTB-203ENST00000368589 WDR97A6NE52 1622 aa38.94■■■■□ 3.82
JTB-203ENST00000368589 ARHGEF11O15085 1522 aa38.89■■■■□ 3.82
JTB-203ENST00000368589 SNAPC4Q5SXM2 1469 aa38.86■■■■□ 3.81
JTB-203ENST00000368589 GRIN2BQ13224 1484 aa38.8■■■■□ 3.8
JTB-203ENST00000368589 MAGI1Q96QZ7 1491 aaPredicted RBP38.76■■■■□ 3.8
JTB-203ENST00000368589 ABCA10Q8WWZ4 1543 aa38.73■■■■□ 3.79
JTB-203ENST00000368589 CHMP7Q8WUX9 453 aaPredicted RBP38.73■■■■□ 3.79
JTB-203ENST00000368589 GAPVD1Q14C86 1478 aa38.73■■■■□ 3.79
JTB-203ENST00000368589 PBRM1Q86U86 1689 aa38.67■■■■□ 3.78
JTB-203ENST00000368589 WRNQ14191 1432 aaPredicted RBP eCLIP38.64■■■■□ 3.788e-7■■□□□ 13.9
JTB-203ENST00000368589 SYNJ2O15056 1496 aa38.64■■■■□ 3.78
JTB-203ENST00000368589 TOP2BQ02880 1626 aa38.63■■■■□ 3.78
JTB-203ENST00000368589 ABCA5Q8WWZ7 1642 aa38.63■■■■□ 3.78
JTB-203ENST00000368589 BIVM-ERCC5R4GMW8 1640 aa38.63■■■■□ 3.78
JTB-203ENST00000368589 CYB5RLQ6IPT4 315 aa38.63■■■■□ 3.77
JTB-203ENST00000368589 SYNJ1O43426 1573 aa38.61■■■■□ 3.77
JTB-203ENST00000368589 CLASP1Q7Z460 1538 aa38.58■■■■□ 3.77
JTB-203ENST00000368589 ARAP1Q96P48 1450 aa38.54■■■■□ 3.76
JTB-203ENST00000368589 GRIN2AQ12879 1464 aa38.31■■■■□ 3.72
JTB-203ENST00000368589 ADAMTS12P58397 1594 aa38.31■■■■□ 3.72
JTB-203ENST00000368589 ERICH3Q5RHP9 1530 aa38.24■■■■□ 3.71
JTB-203ENST00000368589 FHAD1B1AJZ9 1412 aa38.24■■■■□ 3.71
JTB-203ENST00000368589 NUP160Q12769 1436 aa38.18■■■■□ 3.7
JTB-203ENST00000368589 CEP170Q5SW79 1584 aa38.17■■■■□ 3.7
JTB-203ENST00000368589 TRHP20396 242 aaPredicted RBP38.07■■■■□ 3.68
JTB-203ENST00000368589 ERCC6L2Q5T890 1561 aa38.05■■■■□ 3.68
JTB-203ENST00000368589 SHROOM2Q13796 1616 aa37.97■■■■□ 3.67
JTB-203ENST00000368589 IGF1RP08069 1367 aa37.9■■■■□ 3.66
JTB-203ENST00000368589 KIF27Q86VH2 1401 aa37.89■■■■□ 3.66
JTB-203ENST00000368589 JPH4Q96JJ6 628 aa37.84■■■■□ 3.65
JTB-203ENST00000368589 PRG4Q92954 1404 aaPredicted RBP37.79■■■■□ 3.64
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms