RNA–Protein interactions for RNA: ENST00000454250.7

CHRNA7-203, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CHRNA7, Length 2,093 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-203ENST00000454250 NISCHQ9Y2I1 1504 aa46.24■■■■■ 4.99
CHRNA7-203ENST00000454250 CCDC180Q9P1Z9 1646 aa39.81■■■■□ 3.96
CHRNA7-203ENST00000454250 ZCCHC6Q5VYS8 1495 aaKnown RBP38.93■■■■□ 3.82
CHRNA7-203ENST00000454250 SHROOM4Q9ULL8 1493 aa38.51■■■■□ 3.76
CHRNA7-203ENST00000454250 DCAF8L2P0C7V8 631 aa38.34■■■■□ 3.73
CHRNA7-203ENST00000454250 DCAF1Q9Y4B6 1507 aa38.07■■■■□ 3.69
CHRNA7-203ENST00000454250 SUPT5HO00267 1087 aaKnown RBP37.41■■■■□ 3.58
CHRNA7-203ENST00000454250 ABCC9O60706 1549 aa37.38■■■■□ 3.58
CHRNA7-203ENST00000454250 MYO15BQ96JP2 1530 aa37.33■■■■□ 3.57
CHRNA7-203ENST00000454250 NACADO15069 1562 aa37■■■■□ 3.51
CHRNA7-203ENST00000454250 SCRIBQ14160 1630 aa36.96■■■■□ 3.51
CHRNA7-203ENST00000454250 RB1CC1Q8TDY2 1594 aa36.55■■■■□ 3.44
CHRNA7-203ENST00000454250 RSF1Q96T23 1441 aaPredicted RBP36.21■■■■□ 3.39
CHRNA7-203ENST00000454250 CHIC1Q5VXU3 224 aa36.06■■■■□ 3.36
CHRNA7-203ENST00000454250 CECR2Q9BXF3 1484 aa36.01■■■■□ 3.36
CHRNA7-203ENST00000454250 UNC13AQ9UPW8 1703 aa35.89■■■■□ 3.34
CHRNA7-203ENST00000454250 MROH2BQ7Z745 1585 aa35.83■■■■□ 3.33
CHRNA7-203ENST00000454250 BAZ1AQ9NRL2 1556 aaPredicted RBP35.6■■■■□ 3.29
CHRNA7-203ENST00000454250 WIZO95785 1651 aa35.57■■■■□ 3.29
CHRNA7-203ENST00000454250 PABPN1Q86U42 306 aaKnown RBP eCLIP35.53■■■■□ 3.28
CHRNA7-203ENST00000454250 BICRAQ9NZM4 1560 aa35.52■■■■□ 3.28
CHRNA7-203ENST00000454250 SMARCA4P51532 1647 aa35.37■■■■□ 3.25
CHRNA7-203ENST00000454250 TOP2AP11388 1531 aaKnown RBP35.1■■■■□ 3.21
CHRNA7-203ENST00000454250 TRIM41Q8WV44 630 aa35.02■■■■□ 3.2
CHRNA7-203ENST00000454250 CCDC88BA6NC98 1476 aa34.88■■■■□ 3.17
CHRNA7-203ENST00000454250 LOC105371045A0A1W2PR82 267 aa34.85■■■■□ 3.17
CHRNA7-203ENST00000454250 SMARCA2P51531 1590 aa34.84■■■■□ 3.17
CHRNA7-203ENST00000454250 PEG3Q9GZU2 1588 aa34.82■■■■□ 3.17
CHRNA7-203ENST00000454250 EIF4G1Q04637 1599 aaKnown RBP34.76■■■■□ 3.16
CHRNA7-203ENST00000454250 ATAD2BQ9ULI0 1458 aa34.68■■■■□ 3.14
CHRNA7-203ENST00000454250 FAM9AQ8IZU1 332 aaPredicted RBP34.54■■■■□ 3.12
CHRNA7-203ENST00000454250 BAZ1BQ9UIG0 1483 aaKnown RBP34.52■■■■□ 3.12
CHRNA7-203ENST00000454250 ABCC8Q09428 1581 aa34.41■■■■□ 3.1
CHRNA7-203ENST00000454250 NCAPD3P42695 1498 aa34.22■■■■□ 3.07
CHRNA7-203ENST00000454250 EHMT2Q96KQ7 1210 aa34.16■■■■□ 3.06
CHRNA7-203ENST00000454250 HMGXB3Q12766 1538 aa34.14■■■■□ 3.06
CHRNA7-203ENST00000454250 WRNQ14191 1432 aaPredicted RBP eCLIP34.04■■■■□ 3.04
CHRNA7-203ENST00000454250 PCGF6Q9BYE7 350 aa33.95■■■■□ 3.03
CHRNA7-203ENST00000454250 SOGA1O94964 1423 aa33.94■■■■□ 3.02
CHRNA7-203ENST00000454250 SYNJ1O43426 1573 aa33.87■■■■□ 3.01
CHRNA7-203ENST00000454250 RUSC2Q8N2Y8 1516 aa33.8■■■■□ 3
CHRNA7-203ENST00000454250 EEA1Q15075 1411 aa33.79■■■■□ 3
CHRNA7-203ENST00000454250 CSRNP3Q8WYN3 585 aa33.75■■■□□ 2.99
CHRNA7-203ENST00000454250 CC2D2AQ9P2K1 1620 aa33.74■■■□□ 2.99
CHRNA7-203ENST00000454250 CFTRP13569 1480 aa33.67■■■□□ 2.98
CHRNA7-203ENST00000454250 TRIM26Q12899 539 aaPredicted RBP33.64■■■□□ 2.98
CHRNA7-203ENST00000454250 TOP2BQ02880 1626 aa33.6■■■□□ 2.97
CHRNA7-203ENST00000454250 BIVM-ERCC5R4GMW8 1640 aa33.51■■■□□ 2.96
CHRNA7-203ENST00000454250 TNIKQ9UKE5 1360 aa33.49■■■□□ 2.95
CHRNA7-203ENST00000454250 UBTFP17480 764 aaKnown RBP33.46■■■□□ 2.95
CHRNA7-203ENST00000454250 CADPSQ9ULU8 1353 aa33.46■■■□□ 2.95
CHRNA7-203ENST00000454250 GOLGA3Q08378 1498 aa33.44■■■□□ 2.94
CHRNA7-203ENST00000454250 HRCP23327 699 aa33.43■■■□□ 2.94
CHRNA7-203ENST00000454250 CUX1P39880 1505 aa33.43■■■□□ 2.94
CHRNA7-203ENST00000454250 CEP162Q5TB80 1403 aa33.4■■■□□ 2.94
CHRNA7-203ENST00000454250 PRDM2Q13029 1718 aa33.38■■■□□ 2.93
CHRNA7-203ENST00000454250 CEP164Q9UPV0 1460 aa33.36■■■□□ 2.93
CHRNA7-203ENST00000454250 KIF21BO75037 1637 aa33.32■■■□□ 2.93
CHRNA7-203ENST00000454250 PPARGC1BQ86YN6 1023 aaKnown RBP33.24■■■□□ 2.91
CHRNA7-203ENST00000454250 RAPGEF2Q9Y4G8 1499 aa33.18■■■□□ 2.9
CHRNA7-203ENST00000454250 KIF27Q86VH2 1401 aa33.1■■■□□ 2.89
CHRNA7-203ENST00000454250 FANCD2Q9BXW9 1451 aa33.09■■■□□ 2.89
CHRNA7-203ENST00000454250 NESP48681 1621 aa33.04■■■□□ 2.88
CHRNA7-203ENST00000454250 PRXQ9BXM0 1461 aa33.04■■■□□ 2.88
CHRNA7-203ENST00000454250 CLIP1P30622 1438 aa32.99■■■□□ 2.87
CHRNA7-203ENST00000454250 DNAJC5BQ9UF47 199 aa32.98■■■□□ 2.87
CHRNA7-203ENST00000454250 ERICH3Q5RHP9 1530 aa32.97■■■□□ 2.87
CHRNA7-203ENST00000454250 FGD5Q6ZNL6 1462 aa32.96■■■□□ 2.87
CHRNA7-203ENST00000454250 CUX2O14529 1486 aa32.91■■■□□ 2.86
CHRNA7-203ENST00000454250 LAMC3Q9Y6N6 1575 aa32.89■■■□□ 2.86
CHRNA7-203ENST00000454250 RANGAP1P46060 587 aaPredicted RBP32.87■■■□□ 2.85
CHRNA7-203ENST00000454250 TTBK1Q5TCY1 1321 aaPredicted RBP32.85■■■□□ 2.85
CHRNA7-203ENST00000454250 DNMBPQ6XZF7 1577 aa32.83■■■□□ 2.85
CHRNA7-203ENST00000454250 IGF1RP08069 1367 aa32.81■■■□□ 2.84
CHRNA7-203ENST00000454250 TOPBP1Q92547 1522 aa32.79■■■□□ 2.84
CHRNA7-203ENST00000454250 VPS8Q8N3P4 1428 aa32.75■■■□□ 2.83
CHRNA7-203ENST00000454250 POLA1P09884 1462 aaPredicted RBP32.7■■■□□ 2.83
CHRNA7-203ENST00000454250 PDS5BQ9NTI5 1447 aa32.7■■■□□ 2.82
CHRNA7-203ENST00000454250 RAD54L2Q9Y4B4 1467 aa32.69■■■□□ 2.82
CHRNA7-203ENST00000454250 URB2Q14146 1524 aaKnown RBP32.65■■■□□ 2.82
CHRNA7-203ENST00000454250 CARMIL1Q5VZK9 1371 aa32.64■■■□□ 2.82
CHRNA7-203ENST00000454250 ABCA10Q8WWZ4 1543 aa32.62■■■□□ 2.81
CHRNA7-203ENST00000454250 ZEB1P37275 1124 aaPredicted RBP32.57■■■□□ 2.8
CHRNA7-203ENST00000454250 ARAP1Q96P48 1450 aa32.56■■■□□ 2.8
CHRNA7-203ENST00000454250 APLP2Q06481 763 aa32.55■■■□□ 2.8
CHRNA7-203ENST00000454250 KIF21AQ7Z4S6 1674 aa32.53■■■□□ 2.8
CHRNA7-203ENST00000454250 ARHGAP35Q9NRY4 1499 aa32.44■■■□□ 2.78
CHRNA7-203ENST00000454250 WDR97A6NE52 1622 aa32.38■■■□□ 2.77
CHRNA7-203ENST00000454250 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.36■■■□□ 2.77
CHRNA7-203ENST00000454250 TDRD9Q8NDG6 1382 aaKnown RBP32.35■■■□□ 2.77
CHRNA7-203ENST00000454250 CUL7Q14999 1698 aa32.31■■■□□ 2.76
CHRNA7-203ENST00000454250 CCER1Q8TC90 406 aaPredicted RBP32.27■■■□□ 2.76
CHRNA7-203ENST00000454250 ABCA5Q8WWZ7 1642 aa32.27■■■□□ 2.76
CHRNA7-203ENST00000454250 GAPVD1Q14C86 1478 aa32.26■■■□□ 2.75
CHRNA7-203ENST00000454250 KANK4Q5T7N3 995 aaPredicted RBP32.22■■■□□ 2.75
CHRNA7-203ENST00000454250 MRC2Q9UBG0 1479 aa32.21■■■□□ 2.75
CHRNA7-203ENST00000454250 TARBP1Q13395 1621 aaKnown RBP32.21■■■□□ 2.75
CHRNA7-203ENST00000454250 HNRNPUL2Q1KMD3 747 aaKnown RBP32.14■■■□□ 2.74
CHRNA7-203ENST00000454250 P3H3Q8IVL6 736 aa32.11■■■□□ 2.73
CHRNA7-203ENST00000454250 CTTNBP2Q8WZ74 1663 aa32.07■■■□□ 2.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms