RNA–Protein interactions for RNA: ENST00000562506.1

AP003071.3-201, humanhuman

TSL 3 BASIC

Gene AP003071.3, Length 366 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003071.3-201ENST00000562506 NISCHQ9Y2I1 1504 aa51.94■■■■■ 5.9
AP003071.3-201ENST00000562506 CCDC180Q9P1Z9 1646 aa46.2■■■■■ 4.99
AP003071.3-201ENST00000562506 ABCC9O60706 1549 aa45.12■■■■■ 4.81
AP003071.3-201ENST00000562506 RB1CC1Q8TDY2 1594 aa43.46■■■■■ 4.55
AP003071.3-201ENST00000562506 NACADO15069 1562 aa43.42■■■■■ 4.54
AP003071.3-201ENST00000562506 DCAF8L2P0C7V8 631 aa43.35■■■■■ 4.53
AP003071.3-201ENST00000562506 ZCCHC6Q5VYS8 1495 aaKnown RBP43.27■■■■■ 4.52
AP003071.3-201ENST00000562506 MYO15BQ96JP2 1530 aa43.18■■■■■ 4.5
AP003071.3-201ENST00000562506 DCAF1Q9Y4B6 1507 aa43■■■■■ 4.47
AP003071.3-201ENST00000562506 UNC13AQ9UPW8 1703 aa42.47■■■■■ 4.39
AP003071.3-201ENST00000562506 PABPN1Q86U42 306 aaKnown RBP eCLIP42.15■■■■■ 4.34
AP003071.3-201ENST00000562506 SCRIBQ14160 1630 aa42.12■■■■■ 4.33
AP003071.3-201ENST00000562506 BICRAQ9NZM4 1560 aa42.11■■■■■ 4.33
AP003071.3-201ENST00000562506 SHROOM4Q9ULL8 1493 aa41.72■■■■■ 4.27
AP003071.3-201ENST00000562506 DNAJC5BQ9UF47 199 aa41.35■■■■■ 4.21
AP003071.3-201ENST00000562506 EIF4G1Q04637 1599 aaKnown RBP41.01■■■■■ 4.16
AP003071.3-201ENST00000562506 CC2D2AQ9P2K1 1620 aa40.84■■■■■ 4.13
AP003071.3-201ENST00000562506 CECR2Q9BXF3 1484 aa40.55■■■■■ 4.08
AP003071.3-201ENST00000562506 SMARCA4P51532 1647 aa40.31■■■■■ 4.04
AP003071.3-201ENST00000562506 BAZ1AQ9NRL2 1556 aaPredicted RBP40.27■■■■■ 4.04
AP003071.3-201ENST00000562506 ATAD2BQ9ULI0 1458 aa40.07■■■■■ 4.01
AP003071.3-201ENST00000562506 NCAPD3P42695 1498 aa40.05■■■■■ 4
AP003071.3-201ENST00000562506 SMARCA2P51531 1590 aa40.04■■■■■ 4
AP003071.3-201ENST00000562506 MROH2BQ7Z745 1585 aa40.01■■■■■ 4
AP003071.3-201ENST00000562506 PEG3Q9GZU2 1588 aa39.92■■■■□ 3.98
AP003071.3-201ENST00000562506 HMGXB3Q12766 1538 aa39.86■■■■□ 3.97
AP003071.3-201ENST00000562506 BAZ1BQ9UIG0 1483 aaKnown RBP39.75■■■■□ 3.95
AP003071.3-201ENST00000562506 WIZO95785 1651 aa39.6■■■■□ 3.93
AP003071.3-201ENST00000562506 RSF1Q96T23 1441 aaPredicted RBP39.57■■■■□ 3.92
AP003071.3-201ENST00000562506 TOP2AP11388 1531 aaKnown RBP39.19■■■■□ 3.86
AP003071.3-201ENST00000562506 NESP48681 1621 aa39.04■■■■□ 3.84
AP003071.3-201ENST00000562506 LAMC3Q9Y6N6 1575 aa39■■■■□ 3.83
AP003071.3-201ENST00000562506 ERCC6Q03468 1493 aa38.91■■■■□ 3.82
AP003071.3-201ENST00000562506 CADPSQ9ULU8 1353 aa38.88■■■■□ 3.81
AP003071.3-201ENST00000562506 PDS5BQ9NTI5 1447 aa38.73■■■■□ 3.79
AP003071.3-201ENST00000562506 CCDC88BA6NC98 1476 aa38.72■■■■□ 3.79
AP003071.3-201ENST00000562506 CFTRP13569 1480 aa38.66■■■■□ 3.78
AP003071.3-201ENST00000562506 KIF21AQ7Z4S6 1674 aa38.62■■■■□ 3.77
AP003071.3-201ENST00000562506 SUPT5HO00267 1087 aaKnown RBP38.57■■■■□ 3.76
AP003071.3-201ENST00000562506 CUX2O14529 1486 aa38.5■■■■□ 3.75
AP003071.3-201ENST00000562506 THOC2Q8NI27 1593 aaKnown RBP38.48■■■■□ 3.75
AP003071.3-201ENST00000562506 FANCD2Q9BXW9 1451 aa38.43■■■■□ 3.74
AP003071.3-201ENST00000562506 PRDM2Q13029 1718 aa38.41■■■■□ 3.74
AP003071.3-201ENST00000562506 CEP164Q9UPV0 1460 aa38.39■■■■□ 3.74
AP003071.3-201ENST00000562506 MRC2Q9UBG0 1479 aa38.33■■■■□ 3.73
AP003071.3-201ENST00000562506 WDR62O43379 1518 aa38.2■■■■□ 3.71
AP003071.3-201ENST00000562506 URB2Q14146 1524 aaKnown RBP38.03■■■■□ 3.68
AP003071.3-201ENST00000562506 ABCC8Q09428 1581 aa37.85■■■■□ 3.65
AP003071.3-201ENST00000562506 TOPBP1Q92547 1522 aa37.82■■■■□ 3.65
AP003071.3-201ENST00000562506 DNMBPQ6XZF7 1577 aa37.8■■■■□ 3.64
AP003071.3-201ENST00000562506 IFT140Q96RY7 1462 aa37.59■■■■□ 3.61
AP003071.3-201ENST00000562506 CUX1P39880 1505 aa37.54■■■■□ 3.6
AP003071.3-201ENST00000562506 POLA1P09884 1462 aaPredicted RBP37.5■■■■□ 3.59
AP003071.3-201ENST00000562506 FGD5Q6ZNL6 1462 aa37.41■■■■□ 3.58
AP003071.3-201ENST00000562506 TARBP1Q13395 1621 aaKnown RBP37.41■■■■□ 3.58
AP003071.3-201ENST00000562506 ZNF608Q9ULD9 1512 aaPredicted RBP37.39■■■■□ 3.58
AP003071.3-201ENST00000562506 SOGA1O94964 1423 aa37.36■■■■□ 3.57
AP003071.3-201ENST00000562506 RAD54L2Q9Y4B4 1467 aa37.33■■■■□ 3.57
AP003071.3-201ENST00000562506 WRNQ14191 1432 aaPredicted RBP eCLIP37.32■■■■□ 3.56
AP003071.3-201ENST00000562506 EIF4G3O43432 1585 aaKnown RBP37.26■■■■□ 3.56
AP003071.3-201ENST00000562506 BIVM-ERCC5R4GMW8 1640 aa37.25■■■■□ 3.55
AP003071.3-201ENST00000562506 DNAJC5Q9H3Z4 198 aa37.25■■■■□ 3.55
AP003071.3-201ENST00000562506 TOP2BQ02880 1626 aa37.25■■■■□ 3.55
AP003071.3-201ENST00000562506 SYNJ1O43426 1573 aa37.22■■■■□ 3.55
AP003071.3-201ENST00000562506 AQRO60306 1485 aaKnown RBP eCLIP37.18■■■■□ 3.54
AP003071.3-201ENST00000562506 WDR97A6NE52 1622 aa37.16■■■■□ 3.54
AP003071.3-201ENST00000562506 TDRD9Q8NDG6 1382 aaKnown RBP37.12■■■■□ 3.53
AP003071.3-201ENST00000562506 ABCA10Q8WWZ4 1543 aa37.07■■■■□ 3.53
AP003071.3-201ENST00000562506 GAPVD1Q14C86 1478 aa36.93■■■■□ 3.5
AP003071.3-201ENST00000562506 ABCA5Q8WWZ7 1642 aa36.92■■■■□ 3.5
AP003071.3-201ENST00000562506 GRIN2BQ13224 1484 aa36.92■■■■□ 3.5
AP003071.3-201ENST00000562506 OSCARQ8IYS5 282 aa36.9■■■■□ 3.5
AP003071.3-201ENST00000562506 PBRM1Q86U86 1689 aa36.86■■■■□ 3.49
AP003071.3-201ENST00000562506 SNAPC4Q5SXM2 1469 aa36.85■■■■□ 3.49
AP003071.3-201ENST00000562506 MAGI1Q96QZ7 1491 aaPredicted RBP36.82■■■■□ 3.49
AP003071.3-201ENST00000562506 CHD1O14646 1710 aa36.79■■■■□ 3.48
AP003071.3-201ENST00000562506 FBLN2P98095 1184 aa36.73■■■■□ 3.47
AP003071.3-201ENST00000562506 SYNJ2O15056 1496 aa36.68■■■■□ 3.46
AP003071.3-201ENST00000562506 CHMP7Q8WUX9 453 aaPredicted RBP36.65■■■■□ 3.46
AP003071.3-201ENST00000562506 ERICH3Q5RHP9 1530 aa36.63■■■■□ 3.45
AP003071.3-201ENST00000562506 ADAMTS12P58397 1594 aa36.57■■■■□ 3.44
AP003071.3-201ENST00000562506 KIF27Q86VH2 1401 aa36.55■■■■□ 3.44
AP003071.3-201ENST00000562506 FHAD1B1AJZ9 1412 aa36.51■■■■□ 3.43
AP003071.3-201ENST00000562506 TRIM41Q8WV44 630 aa36.45■■■■□ 3.43
AP003071.3-201ENST00000562506 GRIN2AQ12879 1464 aa36.43■■■■□ 3.42
AP003071.3-201ENST00000562506 CLASP1Q7Z460 1538 aa36.39■■■■□ 3.42
AP003071.3-201ENST00000562506 IGF1RP08069 1367 aa36.38■■■■□ 3.41
AP003071.3-201ENST00000562506 CUL7Q14999 1698 aa36.32■■■■□ 3.4
AP003071.3-201ENST00000562506 RIMBP3CA6NJZ7 1639 aa36.3■■■■□ 3.4
AP003071.3-201ENST00000562506 RIMBP3BA6NNM3 1639 aa36.3■■■■□ 3.4
AP003071.3-201ENST00000562506 RIMBP3Q9UFD9 1639 aa36.3■■■■□ 3.4
AP003071.3-201ENST00000562506 ARHGEF11O15085 1522 aa36.29■■■■□ 3.4
AP003071.3-201ENST00000562506 NUP160Q12769 1436 aa36.28■■■■□ 3.4
AP003071.3-201ENST00000562506 CEP170Q5SW79 1584 aa36.25■■■■□ 3.39
AP003071.3-201ENST00000562506 RUSC2Q8N2Y8 1516 aa36.19■■■■□ 3.38
AP003071.3-201ENST00000562506 CARMIL1Q5VZK9 1371 aa36.17■■■■□ 3.38
AP003071.3-201ENST00000562506 CHIC1Q5VXU3 224 aa36.02■■■■□ 3.36
AP003071.3-201ENST00000562506 SHROOM2Q13796 1616 aa36.01■■■■□ 3.35
AP003071.3-201ENST00000562506 ARAP1Q96P48 1450 aa36■■■■□ 3.35
AP003071.3-201ENST00000562506 RAPGEF2Q9Y4G8 1499 aa35.97■■■■□ 3.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms