Protein–RNA interactions for Protein: Q9Y6H6

KCNE3, Potassium voltage-gated channel subfamily E member 3, humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNE3Q9Y6H6 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
KCNE3Q9Y6H6 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
KCNE3Q9Y6H6 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC25.33■■□□□ 1.65
KCNE3Q9Y6H6 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
KCNE3Q9Y6H6 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
KCNE3Q9Y6H6 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
KCNE3Q9Y6H6 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC25.28■■□□□ 1.64
KCNE3Q9Y6H6 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
KCNE3Q9Y6H6 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC25.27■■□□□ 1.64
KCNE3Q9Y6H6 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC25.26■■□□□ 1.63
KCNE3Q9Y6H6 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC25.25■■□□□ 1.63
KCNE3Q9Y6H6 KLF16-203ENST00000592313 508 ntTSL 3 BASIC25.25■■□□□ 1.63
KCNE3Q9Y6H6 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC25.24■■□□□ 1.63
KCNE3Q9Y6H6 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC25.23■■□□□ 1.63
KCNE3Q9Y6H6 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC25.21■■□□□ 1.63
KCNE3Q9Y6H6 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC25.2■■□□□ 1.63
KCNE3Q9Y6H6 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
KCNE3Q9Y6H6 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
KCNE3Q9Y6H6 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC25.19■■□□□ 1.62
KCNE3Q9Y6H6 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
KCNE3Q9Y6H6 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
KCNE3Q9Y6H6 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC25.17■■□□□ 1.62
KCNE3Q9Y6H6 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
KCNE3Q9Y6H6 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC25.16■■□□□ 1.62
KCNE3Q9Y6H6 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC25.15■■□□□ 1.62
KCNE3Q9Y6H6 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC25.13■■□□□ 1.61
KCNE3Q9Y6H6 AL161658.1-201ENST00000623641 1967 ntBASIC25.13■■□□□ 1.61
KCNE3Q9Y6H6 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC25.13■■□□□ 1.61
KCNE3Q9Y6H6 AL133380.1-201ENST00000506013 324 ntBASIC25.12■■□□□ 1.61
KCNE3Q9Y6H6 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC25.12■■□□□ 1.61
KCNE3Q9Y6H6 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
KCNE3Q9Y6H6 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC25.11■■□□□ 1.61
KCNE3Q9Y6H6 ABCB10P1-201ENST00000614297 2181 ntBASIC25.11■■□□□ 1.61
KCNE3Q9Y6H6 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC25.1■■□□□ 1.61
KCNE3Q9Y6H6 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
KCNE3Q9Y6H6 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC25.09■■□□□ 1.61
KCNE3Q9Y6H6 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
KCNE3Q9Y6H6 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.61
KCNE3Q9Y6H6 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC25.07■■□□□ 1.6
KCNE3Q9Y6H6 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
KCNE3Q9Y6H6 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC25.06■■□□□ 1.6
KCNE3Q9Y6H6 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
KCNE3Q9Y6H6 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC25.04■■□□□ 1.6
KCNE3Q9Y6H6 RARRES2P7-201ENST00000567349 469 ntBASIC25.04■■□□□ 1.6
KCNE3Q9Y6H6 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC25.04■■□□□ 1.6
KCNE3Q9Y6H6 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC25.03■■□□□ 1.6
KCNE3Q9Y6H6 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC25.03■■□□□ 1.6
KCNE3Q9Y6H6 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
KCNE3Q9Y6H6 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC25.03■■□□□ 1.6
KCNE3Q9Y6H6 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
KCNE3Q9Y6H6 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC25.03■■□□□ 1.6
KCNE3Q9Y6H6 WASH5P-204ENST00000632292 975 ntBASIC25.02■■□□□ 1.6
KCNE3Q9Y6H6 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
KCNE3Q9Y6H6 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
KCNE3Q9Y6H6 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC25■■□□□ 1.59
KCNE3Q9Y6H6 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
KCNE3Q9Y6H6 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
KCNE3Q9Y6H6 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC24.98■■□□□ 1.59
KCNE3Q9Y6H6 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
KCNE3Q9Y6H6 SETD8P1-201ENST00000623146 1180 ntBASIC24.98■■□□□ 1.59
KCNE3Q9Y6H6 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC24.97■■□□□ 1.59
KCNE3Q9Y6H6 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
KCNE3Q9Y6H6 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC24.97■■□□□ 1.59
KCNE3Q9Y6H6 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
KCNE3Q9Y6H6 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
KCNE3Q9Y6H6 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
KCNE3Q9Y6H6 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC24.96■■□□□ 1.59
KCNE3Q9Y6H6 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
KCNE3Q9Y6H6 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
KCNE3Q9Y6H6 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC24.95■■□□□ 1.58
KCNE3Q9Y6H6 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC24.94■■□□□ 1.58
KCNE3Q9Y6H6 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
KCNE3Q9Y6H6 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC24.92■■□□□ 1.58
KCNE3Q9Y6H6 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC24.91■■□□□ 1.58
KCNE3Q9Y6H6 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC24.91■■□□□ 1.58
KCNE3Q9Y6H6 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC24.9■■□□□ 1.58
KCNE3Q9Y6H6 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC24.9■■□□□ 1.58
KCNE3Q9Y6H6 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
KCNE3Q9Y6H6 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC24.9■■□□□ 1.58
KCNE3Q9Y6H6 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
KCNE3Q9Y6H6 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
KCNE3Q9Y6H6 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC24.89■■□□□ 1.58
KCNE3Q9Y6H6 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC24.89■■□□□ 1.58
KCNE3Q9Y6H6 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
KCNE3Q9Y6H6 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
KCNE3Q9Y6H6 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
KCNE3Q9Y6H6 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC24.86■■□□□ 1.57
KCNE3Q9Y6H6 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
KCNE3Q9Y6H6 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC24.86■■□□□ 1.57
KCNE3Q9Y6H6 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC24.85■■□□□ 1.57
KCNE3Q9Y6H6 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
KCNE3Q9Y6H6 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
KCNE3Q9Y6H6 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC24.84■■□□□ 1.57
KCNE3Q9Y6H6 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
KCNE3Q9Y6H6 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC24.84■■□□□ 1.57
KCNE3Q9Y6H6 ST7-AS1-201ENST00000456775 1889 ntBASIC24.84■■□□□ 1.57
KCNE3Q9Y6H6 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
KCNE3Q9Y6H6 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC24.84■■□□□ 1.57
KCNE3Q9Y6H6 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
KCNE3Q9Y6H6 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms