Protein–RNA interactions for Protein: Q9NTX7

RNF146, E3 ubiquitin-protein ligase RNF146, humanhuman

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF146Q9NTX7 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC31.37■■■□□ 2.61
RNF146Q9NTX7 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC31.36■■■□□ 2.61
RNF146Q9NTX7 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC31.34■■■□□ 2.61
RNF146Q9NTX7 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC31.33■■■□□ 2.61
RNF146Q9NTX7 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC31.33■■■□□ 2.61
RNF146Q9NTX7 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC31.33■■■□□ 2.61
RNF146Q9NTX7 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
RNF146Q9NTX7 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
RNF146Q9NTX7 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
RNF146Q9NTX7 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC31.31■■■□□ 2.6
RNF146Q9NTX7 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC31.31■■■□□ 2.6
RNF146Q9NTX7 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC31.3■■■□□ 2.6
RNF146Q9NTX7 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC31.3■■■□□ 2.6
RNF146Q9NTX7 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC31.29■■■□□ 2.6
RNF146Q9NTX7 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC31.29■■■□□ 2.6
RNF146Q9NTX7 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
RNF146Q9NTX7 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
RNF146Q9NTX7 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
RNF146Q9NTX7 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC31.28■■■□□ 2.6
RNF146Q9NTX7 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
RNF146Q9NTX7 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC31.28■■■□□ 2.6
RNF146Q9NTX7 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC31.27■■■□□ 2.6
RNF146Q9NTX7 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC31.27■■■□□ 2.6
RNF146Q9NTX7 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
RNF146Q9NTX7 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC31.26■■■□□ 2.59
RNF146Q9NTX7 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
RNF146Q9NTX7 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
RNF146Q9NTX7 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC31.24■■■□□ 2.59
RNF146Q9NTX7 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC31.23■■■□□ 2.59
RNF146Q9NTX7 AC044849.2-201ENST00000606596 710 ntBASIC31.23■■■□□ 2.59
RNF146Q9NTX7 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
RNF146Q9NTX7 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC31.22■■■□□ 2.59
RNF146Q9NTX7 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
RNF146Q9NTX7 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
RNF146Q9NTX7 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
RNF146Q9NTX7 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC31.18■■■□□ 2.58
RNF146Q9NTX7 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
RNF146Q9NTX7 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC31.16■■■□□ 2.58
RNF146Q9NTX7 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
RNF146Q9NTX7 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
RNF146Q9NTX7 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC31.14■■■□□ 2.58
RNF146Q9NTX7 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC31.14■■■□□ 2.57
RNF146Q9NTX7 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
RNF146Q9NTX7 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
RNF146Q9NTX7 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
RNF146Q9NTX7 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
RNF146Q9NTX7 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC31.1■■■□□ 2.57
RNF146Q9NTX7 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
RNF146Q9NTX7 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
RNF146Q9NTX7 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
RNF146Q9NTX7 ABHD17AP4-201ENST00000411545 909 ntBASIC31.09■■■□□ 2.57
RNF146Q9NTX7 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
RNF146Q9NTX7 RPS2-209ENST00000529806 993 ntTSL 3 BASIC31.08■■■□□ 2.57
RNF146Q9NTX7 MLEC-202ENST00000412616 841 ntTSL 3 BASIC31.07■■■□□ 2.56
RNF146Q9NTX7 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
RNF146Q9NTX7 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
RNF146Q9NTX7 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
RNF146Q9NTX7 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
RNF146Q9NTX7 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
RNF146Q9NTX7 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
RNF146Q9NTX7 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
RNF146Q9NTX7 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC31.01■■■□□ 2.56
RNF146Q9NTX7 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC31■■■□□ 2.55
RNF146Q9NTX7 BOD1-206ENST00000480951 814 ntTSL 2 BASIC31■■■□□ 2.55
RNF146Q9NTX7 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC31■■■□□ 2.55
RNF146Q9NTX7 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
RNF146Q9NTX7 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC30.99■■■□□ 2.55
RNF146Q9NTX7 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
RNF146Q9NTX7 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC30.98■■■□□ 2.55
RNF146Q9NTX7 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC30.97■■■□□ 2.55
RNF146Q9NTX7 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC30.97■■■□□ 2.55
RNF146Q9NTX7 MIR7108-201ENST00000614319 87 ntBASIC30.97■■■□□ 2.55
RNF146Q9NTX7 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC30.96■■■□□ 2.55
RNF146Q9NTX7 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC30.96■■■□□ 2.55
RNF146Q9NTX7 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
RNF146Q9NTX7 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC30.95■■■□□ 2.55
RNF146Q9NTX7 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC30.95■■■□□ 2.54
RNF146Q9NTX7 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC30.95■■■□□ 2.54
RNF146Q9NTX7 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC30.94■■■□□ 2.54
RNF146Q9NTX7 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC30.93■■■□□ 2.54
RNF146Q9NTX7 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC30.93■■■□□ 2.54
RNF146Q9NTX7 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC30.93■■■□□ 2.54
RNF146Q9NTX7 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC30.92■■■□□ 2.54
RNF146Q9NTX7 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC30.91■■■□□ 2.54
RNF146Q9NTX7 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC30.91■■■□□ 2.54
RNF146Q9NTX7 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC30.91■■■□□ 2.54
RNF146Q9NTX7 AC120057.4-201ENST00000624722 1615 ntBASIC30.91■■■□□ 2.54
RNF146Q9NTX7 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
RNF146Q9NTX7 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
RNF146Q9NTX7 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC30.89■■■□□ 2.54
RNF146Q9NTX7 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
RNF146Q9NTX7 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
RNF146Q9NTX7 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
RNF146Q9NTX7 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
RNF146Q9NTX7 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
RNF146Q9NTX7 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC30.87■■■□□ 2.53
RNF146Q9NTX7 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC30.87■■■□□ 2.53
RNF146Q9NTX7 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
RNF146Q9NTX7 PVT1-219ENST00000523427 938 ntTSL 3 BASIC30.84■■■□□ 2.53
RNF146Q9NTX7 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms