Protein–RNA interactions for Protein: Q9H9D4

ZNF408, Zinc finger protein 408, humanhuman

Predictions only

Length 720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF408Q9H9D4 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC32.91■■■□□ 2.86
ZNF408Q9H9D4 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC32.9■■■□□ 2.86
ZNF408Q9H9D4 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
ZNF408Q9H9D4 MIR4449-201ENST00000578365 66 ntBASIC32.9■■■□□ 2.86
ZNF408Q9H9D4 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC32.89■■■□□ 2.86
ZNF408Q9H9D4 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC32.89■■■□□ 2.86
ZNF408Q9H9D4 DUX4L29-201ENST00000425409 679 ntBASIC32.87■■■□□ 2.85
ZNF408Q9H9D4 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
ZNF408Q9H9D4 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
ZNF408Q9H9D4 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC32.83■■■□□ 2.85
ZNF408Q9H9D4 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC32.83■■■□□ 2.85
ZNF408Q9H9D4 RPS2-209ENST00000529806 993 ntTSL 3 BASIC32.82■■■□□ 2.84
ZNF408Q9H9D4 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC32.82■■■□□ 2.84
ZNF408Q9H9D4 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC32.81■■■□□ 2.84
ZNF408Q9H9D4 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
ZNF408Q9H9D4 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
ZNF408Q9H9D4 MIR639-201ENST00000384974 98 ntBASIC32.79■■■□□ 2.84
ZNF408Q9H9D4 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC32.78■■■□□ 2.84
ZNF408Q9H9D4 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
ZNF408Q9H9D4 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC32.78■■■□□ 2.84
ZNF408Q9H9D4 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
ZNF408Q9H9D4 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC32.75■■■□□ 2.83
ZNF408Q9H9D4 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC32.75■■■□□ 2.83
ZNF408Q9H9D4 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
ZNF408Q9H9D4 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
ZNF408Q9H9D4 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC32.73■■■□□ 2.83
ZNF408Q9H9D4 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC32.72■■■□□ 2.83
ZNF408Q9H9D4 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC32.69■■■□□ 2.82
ZNF408Q9H9D4 AC021231.2-201ENST00000594613 730 ntBASIC32.69■■■□□ 2.82
ZNF408Q9H9D4 HSD17B1P1-201ENST00000590052 955 ntBASIC32.68■■■□□ 2.82
ZNF408Q9H9D4 CALM3-209ENST00000597743 577 ntTSL 4 BASIC32.68■■■□□ 2.82
ZNF408Q9H9D4 MACF1-219ENST00000484793 834 ntTSL 2 BASIC32.67■■■□□ 2.82
ZNF408Q9H9D4 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
ZNF408Q9H9D4 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
ZNF408Q9H9D4 WASH5P-204ENST00000632292 975 ntBASIC32.65■■■□□ 2.82
ZNF408Q9H9D4 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
ZNF408Q9H9D4 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC32.64■■■□□ 2.82
ZNF408Q9H9D4 AC016575.1-201ENST00000607026 382 ntBASIC32.64■■■□□ 2.82
ZNF408Q9H9D4 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC32.63■■■□□ 2.81
ZNF408Q9H9D4 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC32.63■■■□□ 2.81
ZNF408Q9H9D4 RNF166-209ENST00000567844 633 ntTSL 5 BASIC32.63■■■□□ 2.81
ZNF408Q9H9D4 BRD4-212ENST00000630599 726 ntTSL 2 BASIC32.63■■■□□ 2.81
ZNF408Q9H9D4 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC32.63■■■□□ 2.81
ZNF408Q9H9D4 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
ZNF408Q9H9D4 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
ZNF408Q9H9D4 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC32.62■■■□□ 2.81
ZNF408Q9H9D4 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC32.6■■■□□ 2.81
ZNF408Q9H9D4 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC32.6■■■□□ 2.81
ZNF408Q9H9D4 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC32.58■■■□□ 2.81
ZNF408Q9H9D4 CIB2-204ENST00000557846 934 ntTSL 3 BASIC32.58■■■□□ 2.81
ZNF408Q9H9D4 GDI1-215ENST00000630693 786 ntTSL 4 BASIC32.57■■■□□ 2.8
ZNF408Q9H9D4 MIR3648-2-201ENST00000581792 180 ntBASIC32.56■■■□□ 2.8
ZNF408Q9H9D4 MIR3648-1-201ENST00000615959 180 ntBASIC32.56■■■□□ 2.8
ZNF408Q9H9D4 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC32.56■■■□□ 2.8
ZNF408Q9H9D4 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC32.55■■■□□ 2.8
ZNF408Q9H9D4 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
ZNF408Q9H9D4 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC32.53■■■□□ 2.8
ZNF408Q9H9D4 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC32.52■■■□□ 2.8
ZNF408Q9H9D4 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC32.52■■■□□ 2.8
ZNF408Q9H9D4 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC32.48■■■□□ 2.79
ZNF408Q9H9D4 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
ZNF408Q9H9D4 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC32.47■■■□□ 2.79
ZNF408Q9H9D4 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
ZNF408Q9H9D4 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC32.46■■■□□ 2.79
ZNF408Q9H9D4 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
ZNF408Q9H9D4 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC32.45■■■□□ 2.79
ZNF408Q9H9D4 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
ZNF408Q9H9D4 ABHD17AP3-201ENST00000503096 1137 ntBASIC32.43■■■□□ 2.78
ZNF408Q9H9D4 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
ZNF408Q9H9D4 CR559946.2-201ENST00000623684 991 ntBASIC32.39■■■□□ 2.78
ZNF408Q9H9D4 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC32.38■■■□□ 2.77
ZNF408Q9H9D4 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC32.38■■■□□ 2.77
ZNF408Q9H9D4 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC32.38■■■□□ 2.77
ZNF408Q9H9D4 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC32.37■■■□□ 2.77
ZNF408Q9H9D4 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
ZNF408Q9H9D4 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC32.37■■■□□ 2.77
ZNF408Q9H9D4 DUX4L11-201ENST00000611504 1267 ntBASIC32.37■■■□□ 2.77
ZNF408Q9H9D4 DUX4L12-201ENST00000614593 1267 ntBASIC32.37■■■□□ 2.77
ZNF408Q9H9D4 DUX4L14-201ENST00000621227 1267 ntBASIC32.37■■■□□ 2.77
ZNF408Q9H9D4 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC32.36■■■□□ 2.77
ZNF408Q9H9D4 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
ZNF408Q9H9D4 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC32.35■■■□□ 2.77
ZNF408Q9H9D4 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC32.35■■■□□ 2.77
ZNF408Q9H9D4 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC32.35■■■□□ 2.77
ZNF408Q9H9D4 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
ZNF408Q9H9D4 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
ZNF408Q9H9D4 MIR6090-201ENST00000622481 60 ntBASIC32.34■■■□□ 2.77
ZNF408Q9H9D4 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC32.34■■■□□ 2.77
ZNF408Q9H9D4 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC32.34■■■□□ 2.77
ZNF408Q9H9D4 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC32.32■■■□□ 2.76
ZNF408Q9H9D4 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
ZNF408Q9H9D4 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
ZNF408Q9H9D4 AGPS-202ENST00000409888 815 ntTSL 4 BASIC32.31■■■□□ 2.76
ZNF408Q9H9D4 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC32.3■■■□□ 2.76
ZNF408Q9H9D4 AC108673.1-201ENST00000510422 1159 ntBASIC32.3■■■□□ 2.76
ZNF408Q9H9D4 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC32.29■■■□□ 2.76
ZNF408Q9H9D4 LINC01971-201ENST00000617888 1048 ntBASIC32.28■■■□□ 2.76
ZNF408Q9H9D4 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
ZNF408Q9H9D4 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC32.27■■■□□ 2.76
ZNF408Q9H9D4 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC32.27■■■□□ 2.76
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms