Protein–RNA interactions for Protein: Q9H3P2

NELFA, Negative elongation factor A, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFAQ9H3P2 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
NELFAQ9H3P2 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC24.1■■□□□ 1.45
NELFAQ9H3P2 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC24.08■■□□□ 1.45
NELFAQ9H3P2 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
NELFAQ9H3P2 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
NELFAQ9H3P2 ST7-202ENST00000323984 2142 ntTSL 5 BASIC24.07■■□□□ 1.44
NELFAQ9H3P2 ST7-207ENST00000393449 2127 ntTSL 5 BASIC24.07■■□□□ 1.44
NELFAQ9H3P2 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
NELFAQ9H3P2 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC24.06■■□□□ 1.44
NELFAQ9H3P2 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC24.05■■□□□ 1.44
NELFAQ9H3P2 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
NELFAQ9H3P2 AC097358.2-201ENST00000607541 1159 ntBASIC24.04■■□□□ 1.44
NELFAQ9H3P2 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
NELFAQ9H3P2 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
NELFAQ9H3P2 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC24.03■■□□□ 1.44
NELFAQ9H3P2 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC24.02■■□□□ 1.44
NELFAQ9H3P2 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
NELFAQ9H3P2 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
NELFAQ9H3P2 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC24.02■■□□□ 1.44
NELFAQ9H3P2 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC24■■□□□ 1.43
NELFAQ9H3P2 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC24■■□□□ 1.43
NELFAQ9H3P2 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC23.99■■□□□ 1.43
NELFAQ9H3P2 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC23.99■■□□□ 1.43
NELFAQ9H3P2 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
NELFAQ9H3P2 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
NELFAQ9H3P2 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC23.97■■□□□ 1.43
NELFAQ9H3P2 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
NELFAQ9H3P2 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC23.95■■□□□ 1.42
NELFAQ9H3P2 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
NELFAQ9H3P2 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
NELFAQ9H3P2 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
NELFAQ9H3P2 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC23.94■■□□□ 1.42
NELFAQ9H3P2 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
NELFAQ9H3P2 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC23.93■■□□□ 1.42
NELFAQ9H3P2 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
NELFAQ9H3P2 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
NELFAQ9H3P2 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
NELFAQ9H3P2 CAHM-201ENST00000604200 896 ntBASIC23.92■■□□□ 1.42
NELFAQ9H3P2 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
NELFAQ9H3P2 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC23.91■■□□□ 1.42
NELFAQ9H3P2 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
NELFAQ9H3P2 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
NELFAQ9H3P2 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC23.89■■□□□ 1.41
NELFAQ9H3P2 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
NELFAQ9H3P2 AL391121.1-201ENST00000607967 1349 ntBASIC23.87■■□□□ 1.41
NELFAQ9H3P2 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC23.87■■□□□ 1.41
NELFAQ9H3P2 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC23.87■■□□□ 1.41
NELFAQ9H3P2 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
NELFAQ9H3P2 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
NELFAQ9H3P2 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
NELFAQ9H3P2 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC23.85■■□□□ 1.41
NELFAQ9H3P2 WASH5P-204ENST00000632292 975 ntBASIC23.85■■□□□ 1.41
NELFAQ9H3P2 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
NELFAQ9H3P2 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
NELFAQ9H3P2 SUZ12P1-203ENST00000578195 985 ntBASIC23.84■■□□□ 1.41
NELFAQ9H3P2 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
NELFAQ9H3P2 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
NELFAQ9H3P2 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
NELFAQ9H3P2 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC23.81■■□□□ 1.4
NELFAQ9H3P2 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC23.8■■□□□ 1.4
NELFAQ9H3P2 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
NELFAQ9H3P2 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
NELFAQ9H3P2 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
NELFAQ9H3P2 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
NELFAQ9H3P2 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
NELFAQ9H3P2 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC23.79■■□□□ 1.4
NELFAQ9H3P2 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC23.79■■□□□ 1.4
NELFAQ9H3P2 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
NELFAQ9H3P2 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
NELFAQ9H3P2 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC23.78■■□□□ 1.4
NELFAQ9H3P2 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC23.78■■□□□ 1.4
NELFAQ9H3P2 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC23.77■■□□□ 1.4
NELFAQ9H3P2 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC23.76■■□□□ 1.39
NELFAQ9H3P2 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
NELFAQ9H3P2 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
NELFAQ9H3P2 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
NELFAQ9H3P2 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
NELFAQ9H3P2 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
NELFAQ9H3P2 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
NELFAQ9H3P2 EBPL-202ENST00000378268 680 ntTSL 3 BASIC23.74■■□□□ 1.39
NELFAQ9H3P2 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
NELFAQ9H3P2 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
NELFAQ9H3P2 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
NELFAQ9H3P2 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC23.72■■□□□ 1.39
NELFAQ9H3P2 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC23.71■■□□□ 1.39
NELFAQ9H3P2 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
NELFAQ9H3P2 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
NELFAQ9H3P2 AL161658.1-201ENST00000623641 1967 ntBASIC23.7■■□□□ 1.38
NELFAQ9H3P2 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
NELFAQ9H3P2 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC23.69■■□□□ 1.38
NELFAQ9H3P2 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC23.69■■□□□ 1.38
NELFAQ9H3P2 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
NELFAQ9H3P2 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
NELFAQ9H3P2 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
NELFAQ9H3P2 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC23.67■■□□□ 1.38
NELFAQ9H3P2 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC23.67■■□□□ 1.38
NELFAQ9H3P2 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
NELFAQ9H3P2 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
NELFAQ9H3P2 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
NELFAQ9H3P2 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 9.2 ms