Protein–RNA interactions for Protein: Q96QU1

PCDH15, Protocadherin-15, humanhuman

Predictions only

Length 1,955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15Q96QU1 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC27.14■■□□□ 1.94
PCDH15Q96QU1 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
PCDH15Q96QU1 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
PCDH15Q96QU1 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
PCDH15Q96QU1 BOD1-206ENST00000480951 814 ntTSL 2 BASIC27.12■■□□□ 1.93
PCDH15Q96QU1 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
PCDH15Q96QU1 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC27.1■■□□□ 1.93
PCDH15Q96QU1 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
PCDH15Q96QU1 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC27.09■■□□□ 1.93
PCDH15Q96QU1 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
PCDH15Q96QU1 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
PCDH15Q96QU1 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
PCDH15Q96QU1 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC27.08■■□□□ 1.92
PCDH15Q96QU1 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC27.08■■□□□ 1.92
PCDH15Q96QU1 HGH1-207ENST00000628266 258 ntTSL 5 BASIC27.06■■□□□ 1.92
PCDH15Q96QU1 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
PCDH15Q96QU1 RPS2-209ENST00000529806 993 ntTSL 3 BASIC27.05■■□□□ 1.92
PCDH15Q96QU1 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC27.05■■□□□ 1.92
PCDH15Q96QU1 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC27.05■■□□□ 1.92
PCDH15Q96QU1 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC27.04■■□□□ 1.92
PCDH15Q96QU1 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC27.04■■□□□ 1.92
PCDH15Q96QU1 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC27.04■■□□□ 1.92
PCDH15Q96QU1 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC27.04■■□□□ 1.92
PCDH15Q96QU1 ZNRF2P2-203ENST00000454624 420 ntBASIC27.02■■□□□ 1.92
PCDH15Q96QU1 WASH5P-204ENST00000632292 975 ntBASIC27.02■■□□□ 1.92
PCDH15Q96QU1 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC27.02■■□□□ 1.92
PCDH15Q96QU1 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
PCDH15Q96QU1 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC27■■□□□ 1.91
PCDH15Q96QU1 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
PCDH15Q96QU1 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC27■■□□□ 1.91
PCDH15Q96QU1 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC26.99■■□□□ 1.91
PCDH15Q96QU1 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
PCDH15Q96QU1 RPS2-202ENST00000526522 924 ntTSL 2 BASIC26.97■■□□□ 1.91
PCDH15Q96QU1 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC26.96■■□□□ 1.91
PCDH15Q96QU1 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC26.95■■□□□ 1.91
PCDH15Q96QU1 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC26.94■■□□□ 1.9
PCDH15Q96QU1 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
PCDH15Q96QU1 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
PCDH15Q96QU1 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC26.92■■□□□ 1.9
PCDH15Q96QU1 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC26.91■■□□□ 1.9
PCDH15Q96QU1 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
PCDH15Q96QU1 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC26.89■■□□□ 1.9
PCDH15Q96QU1 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC26.89■■□□□ 1.89
PCDH15Q96QU1 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC26.88■■□□□ 1.89
PCDH15Q96QU1 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
PCDH15Q96QU1 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
PCDH15Q96QU1 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC26.87■■□□□ 1.89
PCDH15Q96QU1 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
PCDH15Q96QU1 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
PCDH15Q96QU1 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC26.86■■□□□ 1.89
PCDH15Q96QU1 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC26.85■■□□□ 1.89
PCDH15Q96QU1 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
PCDH15Q96QU1 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
PCDH15Q96QU1 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
PCDH15Q96QU1 MIR4449-201ENST00000578365 66 ntBASIC26.82■■□□□ 1.88
PCDH15Q96QU1 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC26.81■■□□□ 1.88
PCDH15Q96QU1 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
PCDH15Q96QU1 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
PCDH15Q96QU1 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC26.8■■□□□ 1.88
PCDH15Q96QU1 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
PCDH15Q96QU1 DUX4L29-201ENST00000425409 679 ntBASIC26.78■■□□□ 1.88
PCDH15Q96QU1 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
PCDH15Q96QU1 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
PCDH15Q96QU1 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC26.77■■□□□ 1.88
PCDH15Q96QU1 MACF1-219ENST00000484793 834 ntTSL 2 BASIC26.77■■□□□ 1.88
PCDH15Q96QU1 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC26.76■■□□□ 1.87
PCDH15Q96QU1 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
PCDH15Q96QU1 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
PCDH15Q96QU1 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
PCDH15Q96QU1 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC26.73■■□□□ 1.87
PCDH15Q96QU1 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
PCDH15Q96QU1 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC26.72■■□□□ 1.87
PCDH15Q96QU1 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
PCDH15Q96QU1 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
PCDH15Q96QU1 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC26.7■■□□□ 1.86
PCDH15Q96QU1 AC021231.2-201ENST00000594613 730 ntBASIC26.7■■□□□ 1.86
PCDH15Q96QU1 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
PCDH15Q96QU1 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
PCDH15Q96QU1 MIR639-201ENST00000384974 98 ntBASIC26.69■■□□□ 1.86
PCDH15Q96QU1 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
PCDH15Q96QU1 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC26.67■■□□□ 1.86
PCDH15Q96QU1 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC26.66■■□□□ 1.86
PCDH15Q96QU1 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
PCDH15Q96QU1 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC26.66■■□□□ 1.86
PCDH15Q96QU1 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
PCDH15Q96QU1 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
PCDH15Q96QU1 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
PCDH15Q96QU1 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
PCDH15Q96QU1 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC26.63■■□□□ 1.85
PCDH15Q96QU1 GDI1-215ENST00000630693 786 ntTSL 4 BASIC26.63■■□□□ 1.85
PCDH15Q96QU1 MIR3648-2-201ENST00000581792 180 ntBASIC26.62■■□□□ 1.85
PCDH15Q96QU1 MIR3648-1-201ENST00000615959 180 ntBASIC26.62■■□□□ 1.85
PCDH15Q96QU1 AC016575.1-201ENST00000607026 382 ntBASIC26.62■■□□□ 1.85
PCDH15Q96QU1 RNF166-209ENST00000567844 633 ntTSL 5 BASIC26.61■■□□□ 1.85
PCDH15Q96QU1 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC26.6■■□□□ 1.85
PCDH15Q96QU1 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
PCDH15Q96QU1 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC26.6■■□□□ 1.85
PCDH15Q96QU1 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
PCDH15Q96QU1 CR559946.2-201ENST00000623684 991 ntBASIC26.6■■□□□ 1.85
PCDH15Q96QU1 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms