Protein–RNA interactions for Protein: Q8N556

AFAP1, Actin filament-associated protein 1, humanhuman

Predictions only

Length 730 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AFAP1Q8N556 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC41.99■■■■■ 4.31
AFAP1Q8N556 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC41.98■■■■■ 4.31
AFAP1Q8N556 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC41.98■■■■■ 4.31
AFAP1Q8N556 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC41.97■■■■■ 4.31
AFAP1Q8N556 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC41.96■■■■■ 4.31
AFAP1Q8N556 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC41.96■■■■■ 4.31
AFAP1Q8N556 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC41.95■■■■■ 4.31
AFAP1Q8N556 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC41.95■■■■■ 4.31
AFAP1Q8N556 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC41.94■■■■■ 4.3
AFAP1Q8N556 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC41.92■■■■■ 4.3
AFAP1Q8N556 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC41.9■■■■■ 4.3
AFAP1Q8N556 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC41.9■■■■■ 4.3
AFAP1Q8N556 RPS2-202ENST00000526522 924 ntTSL 2 BASIC41.89■■■■■ 4.3
AFAP1Q8N556 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC41.88■■■■■ 4.29
AFAP1Q8N556 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC41.88■■■■■ 4.29
AFAP1Q8N556 WASH5P-204ENST00000632292 975 ntBASIC41.88■■■■■ 4.29
AFAP1Q8N556 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC41.87■■■■■ 4.29
AFAP1Q8N556 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC41.87■■■■■ 4.29
AFAP1Q8N556 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC41.86■■■■■ 4.29
AFAP1Q8N556 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC41.85■■■■■ 4.29
AFAP1Q8N556 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC41.83■■■■■ 4.29
AFAP1Q8N556 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC41.81■■■■■ 4.28
AFAP1Q8N556 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC41.81■■■■■ 4.28
AFAP1Q8N556 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC41.8■■■■■ 4.28
AFAP1Q8N556 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC41.8■■■■■ 4.28
AFAP1Q8N556 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC41.79■■■■■ 4.28
AFAP1Q8N556 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC41.79■■■■■ 4.28
AFAP1Q8N556 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC41.78■■■■■ 4.28
AFAP1Q8N556 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC41.77■■■■■ 4.28
AFAP1Q8N556 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC41.77■■■■■ 4.28
AFAP1Q8N556 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC41.77■■■■■ 4.28
AFAP1Q8N556 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC41.76■■■■■ 4.28
AFAP1Q8N556 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC41.75■■■■■ 4.27
AFAP1Q8N556 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC41.7■■■■■ 4.27
AFAP1Q8N556 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC41.69■■■■■ 4.26
AFAP1Q8N556 DUX4L29-201ENST00000425409 679 ntBASIC41.69■■■■■ 4.26
AFAP1Q8N556 MIR4449-201ENST00000578365 66 ntBASIC41.69■■■■■ 4.26
AFAP1Q8N556 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC41.68■■■■■ 4.26
AFAP1Q8N556 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC41.68■■■■■ 4.26
AFAP1Q8N556 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC41.67■■■■■ 4.26
AFAP1Q8N556 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC41.67■■■■■ 4.26
AFAP1Q8N556 RPS2-209ENST00000529806 993 ntTSL 3 BASIC41.66■■■■■ 4.26
AFAP1Q8N556 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC41.65■■■■■ 4.26
AFAP1Q8N556 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC41.64■■■■■ 4.26
AFAP1Q8N556 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC41.63■■■■■ 4.26
AFAP1Q8N556 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC41.62■■■■■ 4.25
AFAP1Q8N556 AC021231.2-201ENST00000594613 730 ntBASIC41.6■■■■■ 4.25
AFAP1Q8N556 MIR639-201ENST00000384974 98 ntBASIC41.58■■■■■ 4.25
AFAP1Q8N556 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC41.57■■■■■ 4.25
AFAP1Q8N556 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC41.57■■■■■ 4.25
AFAP1Q8N556 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC41.55■■■■■ 4.24
AFAP1Q8N556 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC41.55■■■■■ 4.24
AFAP1Q8N556 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC41.53■■■■■ 4.24
AFAP1Q8N556 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC41.53■■■■■ 4.24
AFAP1Q8N556 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC41.53■■■■■ 4.24
AFAP1Q8N556 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC41.52■■■■■ 4.24
AFAP1Q8N556 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC41.52■■■■■ 4.24
AFAP1Q8N556 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC41.52■■■■■ 4.24
AFAP1Q8N556 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC41.51■■■■■ 4.24
AFAP1Q8N556 MACF1-219ENST00000484793 834 ntTSL 2 BASIC41.51■■■■■ 4.24
AFAP1Q8N556 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC41.5■■■■■ 4.23
AFAP1Q8N556 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC41.49■■■■■ 4.23
AFAP1Q8N556 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC41.44■■■■■ 4.22
AFAP1Q8N556 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC41.41■■■■■ 4.22
AFAP1Q8N556 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC41.4■■■■■ 4.22
AFAP1Q8N556 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC41.38■■■■■ 4.21
AFAP1Q8N556 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC41.38■■■■■ 4.21
AFAP1Q8N556 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC41.36■■■■■ 4.21
AFAP1Q8N556 MIR3648-2-201ENST00000581792 180 ntBASIC41.36■■■■■ 4.21
AFAP1Q8N556 AC016575.1-201ENST00000607026 382 ntBASIC41.36■■■■■ 4.21
AFAP1Q8N556 MIR3648-1-201ENST00000615959 180 ntBASIC41.36■■■■■ 4.21
AFAP1Q8N556 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC41.35■■■■■ 4.21
AFAP1Q8N556 CIB2-204ENST00000557846 934 ntTSL 3 BASIC41.34■■■■■ 4.21
AFAP1Q8N556 RNF166-209ENST00000567844 633 ntTSL 5 BASIC41.34■■■■■ 4.21
AFAP1Q8N556 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC41.34■■■■■ 4.21
AFAP1Q8N556 MIR6090-201ENST00000622481 60 ntBASIC41.33■■■■■ 4.21
AFAP1Q8N556 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC41.33■■■■■ 4.21
AFAP1Q8N556 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC41.32■■■■■ 4.21
AFAP1Q8N556 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC41.31■■■■■ 4.2
AFAP1Q8N556 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC41.31■■■■■ 4.2
AFAP1Q8N556 GDI1-215ENST00000630693 786 ntTSL 4 BASIC41.31■■■■■ 4.2
AFAP1Q8N556 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC41.3■■■■■ 4.2
AFAP1Q8N556 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC41.3■■■■■ 4.2
AFAP1Q8N556 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC41.3■■■■■ 4.2
AFAP1Q8N556 HSD17B1P1-201ENST00000590052 955 ntBASIC41.27■■■■■ 4.2
AFAP1Q8N556 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC41.25■■■■■ 4.19
AFAP1Q8N556 CALM3-209ENST00000597743 577 ntTSL 4 BASIC41.23■■■■■ 4.19
AFAP1Q8N556 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC41.21■■■■■ 4.19
AFAP1Q8N556 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC41.19■■■■■ 4.18
AFAP1Q8N556 CR559946.2-201ENST00000623684 991 ntBASIC41.19■■■■■ 4.18
AFAP1Q8N556 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC41.18■■■■■ 4.18
AFAP1Q8N556 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC41.18■■■■■ 4.18
AFAP1Q8N556 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC41.17■■■■■ 4.18
AFAP1Q8N556 AC108673.1-201ENST00000510422 1159 ntBASIC41.17■■■■■ 4.18
AFAP1Q8N556 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC41.16■■■■■ 4.18
AFAP1Q8N556 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC41.16■■■■■ 4.18
AFAP1Q8N556 DUX4L11-201ENST00000611504 1267 ntBASIC41.15■■■■■ 4.18
AFAP1Q8N556 DUX4L12-201ENST00000614593 1267 ntBASIC41.15■■■■■ 4.18
AFAP1Q8N556 DUX4L14-201ENST00000621227 1267 ntBASIC41.15■■■■■ 4.18
AFAP1Q8N556 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC41.14■■■■■ 4.18
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms