Protein–RNA interactions for Protein: Q8IVN8

SBSPON, Somatomedin-B and thrombospondin type-1 domain-containing protein, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBSPONQ8IVN8 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SBSPONQ8IVN8 AC005559.1-201ENST00000589661 871 ntBASIC20.24■□□□□ 0.83
SBSPONQ8IVN8 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SBSPONQ8IVN8 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
SBSPONQ8IVN8 AC044849.2-201ENST00000606596 710 ntBASIC20.23■□□□□ 0.83
SBSPONQ8IVN8 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC20.22■□□□□ 0.83
SBSPONQ8IVN8 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC20.21■□□□□ 0.83
SBSPONQ8IVN8 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC20.21■□□□□ 0.83
SBSPONQ8IVN8 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SBSPONQ8IVN8 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
SBSPONQ8IVN8 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SBSPONQ8IVN8 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC20.2■□□□□ 0.82
SBSPONQ8IVN8 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC20.19■□□□□ 0.82
SBSPONQ8IVN8 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SBSPONQ8IVN8 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SBSPONQ8IVN8 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
SBSPONQ8IVN8 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SBSPONQ8IVN8 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SBSPONQ8IVN8 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
SBSPONQ8IVN8 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SBSPONQ8IVN8 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SBSPONQ8IVN8 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
SBSPONQ8IVN8 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC20.15■□□□□ 0.82
SBSPONQ8IVN8 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC20.15■□□□□ 0.82
SBSPONQ8IVN8 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
SBSPONQ8IVN8 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
SBSPONQ8IVN8 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC20.14■□□□□ 0.81
SBSPONQ8IVN8 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC20.13■□□□□ 0.81
SBSPONQ8IVN8 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC20.12■□□□□ 0.81
SBSPONQ8IVN8 HLA-V-202ENST00000446817 847 ntBASIC20.11■□□□□ 0.81
SBSPONQ8IVN8 DENR-202ENST00000455982 1052 ntTSL 5 BASIC20.11■□□□□ 0.81
SBSPONQ8IVN8 MBP-237ENST00000579129 1052 ntTSL 5 BASIC20.11■□□□□ 0.81
SBSPONQ8IVN8 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SBSPONQ8IVN8 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
SBSPONQ8IVN8 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SBSPONQ8IVN8 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC20.1■□□□□ 0.81
SBSPONQ8IVN8 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
SBSPONQ8IVN8 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SBSPONQ8IVN8 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC20.08■□□□□ 0.81
SBSPONQ8IVN8 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC20.08■□□□□ 0.81
SBSPONQ8IVN8 BOD1-206ENST00000480951 814 ntTSL 2 BASIC20.08■□□□□ 0.81
SBSPONQ8IVN8 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC20.08■□□□□ 0.81
SBSPONQ8IVN8 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
SBSPONQ8IVN8 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SBSPONQ8IVN8 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SBSPONQ8IVN8 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SBSPONQ8IVN8 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SBSPONQ8IVN8 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC20.06■□□□□ 0.8
SBSPONQ8IVN8 ZNRF2P2-203ENST00000454624 420 ntBASIC20.05■□□□□ 0.8
SBSPONQ8IVN8 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SBSPONQ8IVN8 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SBSPONQ8IVN8 WASH5P-204ENST00000632292 975 ntBASIC20.04■□□□□ 0.8
SBSPONQ8IVN8 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SBSPONQ8IVN8 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC20.02■□□□□ 0.8
SBSPONQ8IVN8 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC20.02■□□□□ 0.8
SBSPONQ8IVN8 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SBSPONQ8IVN8 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC20.01■□□□□ 0.79
SBSPONQ8IVN8 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SBSPONQ8IVN8 AL161658.1-201ENST00000623641 1967 ntBASIC20.01■□□□□ 0.79
SBSPONQ8IVN8 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SBSPONQ8IVN8 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
SBSPONQ8IVN8 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SBSPONQ8IVN8 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SBSPONQ8IVN8 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SBSPONQ8IVN8 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SBSPONQ8IVN8 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SBSPONQ8IVN8 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SBSPONQ8IVN8 HGH1-207ENST00000628266 258 ntTSL 5 BASIC19.97■□□□□ 0.79
SBSPONQ8IVN8 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
SBSPONQ8IVN8 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SBSPONQ8IVN8 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SBSPONQ8IVN8 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC19.96■□□□□ 0.79
SBSPONQ8IVN8 RPS2-209ENST00000529806 993 ntTSL 3 BASIC19.96■□□□□ 0.79
SBSPONQ8IVN8 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SBSPONQ8IVN8 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SBSPONQ8IVN8 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SBSPONQ8IVN8 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC19.94■□□□□ 0.78
SBSPONQ8IVN8 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SBSPONQ8IVN8 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SBSPONQ8IVN8 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SBSPONQ8IVN8 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
SBSPONQ8IVN8 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC19.91■□□□□ 0.78
SBSPONQ8IVN8 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SBSPONQ8IVN8 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SBSPONQ8IVN8 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC19.91■□□□□ 0.78
SBSPONQ8IVN8 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC19.91■□□□□ 0.78
SBSPONQ8IVN8 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SBSPONQ8IVN8 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SBSPONQ8IVN8 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
SBSPONQ8IVN8 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SBSPONQ8IVN8 DUX4L29-201ENST00000425409 679 ntBASIC19.9■□□□□ 0.78
SBSPONQ8IVN8 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC19.9■□□□□ 0.78
SBSPONQ8IVN8 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
SBSPONQ8IVN8 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC19.9■□□□□ 0.78
SBSPONQ8IVN8 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC19.89■□□□□ 0.77
SBSPONQ8IVN8 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SBSPONQ8IVN8 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SBSPONQ8IVN8 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SBSPONQ8IVN8 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SBSPONQ8IVN8 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms