Protein–RNA interactions for Protein: Q63HN8

RNF213, E3 ubiquitin-protein ligase RNF213, humanhuman

Predictions only

Length 5,207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213Q63HN8 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
RNF213Q63HN8 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
RNF213Q63HN8 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC15.35■□□□□ 0.05
RNF213Q63HN8 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
RNF213Q63HN8 AL592295.1-201ENST00000400984 884 ntBASIC15.34■□□□□ 0.05
RNF213Q63HN8 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC15.33■□□□□ 0.05
RNF213Q63HN8 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
RNF213Q63HN8 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC15.31■□□□□ 0.04
RNF213Q63HN8 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC15.31■□□□□ 0.04
RNF213Q63HN8 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC15.31■□□□□ 0.04
RNF213Q63HN8 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
RNF213Q63HN8 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RNF213Q63HN8 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
RNF213Q63HN8 DUX4L29-201ENST00000425409 679 ntBASIC15.27■□□□□ 0.03
RNF213Q63HN8 ABHD17AP5-201ENST00000580133 923 ntBASIC15.27■□□□□ 0.03
RNF213Q63HN8 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC15.26■□□□□ 0.03
RNF213Q63HN8 MTURN-203ENST00000409688 843 ntTSL 2 BASIC15.26■□□□□ 0.03
RNF213Q63HN8 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RNF213Q63HN8 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF213Q63HN8 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
RNF213Q63HN8 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
RNF213Q63HN8 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RNF213Q63HN8 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
RNF213Q63HN8 AC018358.1-201ENST00000631079 1402 ntBASIC15.24■□□□□ 0.03
RNF213Q63HN8 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF213Q63HN8 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC15.24■□□□□ 0.03
RNF213Q63HN8 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF213Q63HN8 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RNF213Q63HN8 GDI1-215ENST00000630693 786 ntTSL 4 BASIC15.21■□□□□ 0.03
RNF213Q63HN8 AC021231.2-201ENST00000594613 730 ntBASIC15.21■□□□□ 0.03
RNF213Q63HN8 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RNF213Q63HN8 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
RNF213Q63HN8 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC15.2■□□□□ 0.02
RNF213Q63HN8 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF213Q63HN8 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF213Q63HN8 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
RNF213Q63HN8 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC15.18■□□□□ 0.02
RNF213Q63HN8 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
RNF213Q63HN8 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF213Q63HN8 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RNF213Q63HN8 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF213Q63HN8 MVK-208ENST00000539696 608 ntTSL 5 BASIC15.18■□□□□ 0.02
RNF213Q63HN8 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF213Q63HN8 MIR935-201ENST00000401179 91 ntBASIC15.17■□□□□ 0.02
RNF213Q63HN8 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC15.16■□□□□ 0.02
RNF213Q63HN8 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF213Q63HN8 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC15.16■□□□□ 0.02
RNF213Q63HN8 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RNF213Q63HN8 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
RNF213Q63HN8 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
RNF213Q63HN8 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RNF213Q63HN8 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RNF213Q63HN8 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RNF213Q63HN8 RNF126P1-201ENST00000567452 1320 ntBASIC15.13■□□□□ 0.01
RNF213Q63HN8 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RNF213Q63HN8 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RNF213Q63HN8 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RNF213Q63HN8 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RNF213Q63HN8 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RNF213Q63HN8 AGPS-202ENST00000409888 815 ntTSL 4 BASIC15.11■□□□□ 0.01
RNF213Q63HN8 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RNF213Q63HN8 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RNF213Q63HN8 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC15.1■□□□□ 0.01
RNF213Q63HN8 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC15.1■□□□□ 0.01
RNF213Q63HN8 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RNF213Q63HN8 DENR-202ENST00000455982 1052 ntTSL 5 BASIC15.09■□□□□ 0.01
RNF213Q63HN8 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC15.08■□□□□ 0
RNF213Q63HN8 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
RNF213Q63HN8 AL033527.3-201ENST00000566366 1196 ntBASIC15.08■□□□□ 0
RNF213Q63HN8 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
RNF213Q63HN8 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC15.07■□□□□ 0
RNF213Q63HN8 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC15.07■□□□□ 0
RNF213Q63HN8 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
RNF213Q63HN8 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RNF213Q63HN8 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC15.05■□□□□ 0
RNF213Q63HN8 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ 0
RNF213Q63HN8 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RNF213Q63HN8 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC15.05■□□□□ -0
RNF213Q63HN8 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RNF213Q63HN8 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RNF213Q63HN8 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RNF213Q63HN8 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC15.03■□□□□ -0
RNF213Q63HN8 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC15.03■□□□□ -0
RNF213Q63HN8 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC15.03■□□□□ -0
RNF213Q63HN8 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC15.03■□□□□ -0
RNF213Q63HN8 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC15.03■□□□□ -0
RNF213Q63HN8 AC012354.3-201ENST00000623734 483 ntBASIC15.02■□□□□ -0
RNF213Q63HN8 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC15.02■□□□□ -0
RNF213Q63HN8 DUX4L11-201ENST00000611504 1267 ntBASIC15.02□□□□□ -0.01
RNF213Q63HN8 DUX4L12-201ENST00000614593 1267 ntBASIC15.02□□□□□ -0.01
RNF213Q63HN8 DUX4L14-201ENST00000621227 1267 ntBASIC15.02□□□□□ -0.01
RNF213Q63HN8 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC15.02□□□□□ -0.01
RNF213Q63HN8 SRP68-213ENST00000629930 165 ntTSL 5 BASIC15.02□□□□□ -0.01
RNF213Q63HN8 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RNF213Q63HN8 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RNF213Q63HN8 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RNF213Q63HN8 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC15□□□□□ -0.01
RNF213Q63HN8 AC008813.1-201ENST00000536597 885 ntBASIC14.99□□□□□ -0.01
RNF213Q63HN8 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RNF213Q63HN8 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms