Protein–RNA interactions for Protein: Q63HN8

RNF213, E3 ubiquitin-protein ligase RNF213, humanhuman

Predictions only

Length 5,207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213Q63HN8 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RNF213Q63HN8 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
RNF213Q63HN8 BRD4-212ENST00000630599 726 ntTSL 2 BASIC15.82■□□□□ 0.12
RNF213Q63HN8 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RNF213Q63HN8 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC15.81■□□□□ 0.12
RNF213Q63HN8 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC15.8■□□□□ 0.12
RNF213Q63HN8 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF213Q63HN8 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RNF213Q63HN8 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF213Q63HN8 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RNF213Q63HN8 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
RNF213Q63HN8 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
RNF213Q63HN8 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
RNF213Q63HN8 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC15.77■□□□□ 0.11
RNF213Q63HN8 MIR639-201ENST00000384974 98 ntBASIC15.75■□□□□ 0.11
RNF213Q63HN8 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC15.75■□□□□ 0.11
RNF213Q63HN8 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC15.75■□□□□ 0.11
RNF213Q63HN8 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC15.74■□□□□ 0.11
RNF213Q63HN8 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC15.73■□□□□ 0.11
RNF213Q63HN8 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
RNF213Q63HN8 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RNF213Q63HN8 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RNF213Q63HN8 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RNF213Q63HN8 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RNF213Q63HN8 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RNF213Q63HN8 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC15.71■□□□□ 0.11
RNF213Q63HN8 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC15.71■□□□□ 0.1
RNF213Q63HN8 ZNRF2P2-203ENST00000454624 420 ntBASIC15.7■□□□□ 0.1
RNF213Q63HN8 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
RNF213Q63HN8 DUX4L28-201ENST00000623687 678 ntBASIC15.68■□□□□ 0.1
RNF213Q63HN8 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC15.68■□□□□ 0.1
RNF213Q63HN8 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
RNF213Q63HN8 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNF213Q63HN8 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNF213Q63HN8 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC15.67■□□□□ 0.1
RNF213Q63HN8 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC15.65■□□□□ 0.1
RNF213Q63HN8 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RNF213Q63HN8 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RNF213Q63HN8 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
RNF213Q63HN8 CALM3-209ENST00000597743 577 ntTSL 4 BASIC15.62■□□□□ 0.09
RNF213Q63HN8 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC15.62■□□□□ 0.09
RNF213Q63HN8 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
RNF213Q63HN8 AC044849.2-201ENST00000606596 710 ntBASIC15.61■□□□□ 0.09
RNF213Q63HN8 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC15.57■□□□□ 0.08
RNF213Q63HN8 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC15.56■□□□□ 0.08
RNF213Q63HN8 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC15.55■□□□□ 0.08
RNF213Q63HN8 MIR762-201ENST00000390236 83 ntBASIC15.55■□□□□ 0.08
RNF213Q63HN8 HGH1-207ENST00000628266 258 ntTSL 5 BASIC15.55■□□□□ 0.08
RNF213Q63HN8 MACF1-219ENST00000484793 834 ntTSL 2 BASIC15.54■□□□□ 0.08
RNF213Q63HN8 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNF213Q63HN8 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RNF213Q63HN8 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNF213Q63HN8 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC15.53■□□□□ 0.08
RNF213Q63HN8 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RNF213Q63HN8 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
RNF213Q63HN8 EBPL-202ENST00000378268 680 ntTSL 3 BASIC15.52■□□□□ 0.08
RNF213Q63HN8 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
RNF213Q63HN8 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
RNF213Q63HN8 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RNF213Q63HN8 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF213Q63HN8 ABHD17AP3-201ENST00000503096 1137 ntBASIC15.49■□□□□ 0.07
RNF213Q63HN8 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
RNF213Q63HN8 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RNF213Q63HN8 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC15.47■□□□□ 0.07
RNF213Q63HN8 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RNF213Q63HN8 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RNF213Q63HN8 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
RNF213Q63HN8 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RNF213Q63HN8 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
RNF213Q63HN8 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC15.44■□□□□ 0.06
RNF213Q63HN8 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RNF213Q63HN8 AC005559.1-201ENST00000589661 871 ntBASIC15.43■□□□□ 0.06
RNF213Q63HN8 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
RNF213Q63HN8 MIR3648-2-201ENST00000581792 180 ntBASIC15.43■□□□□ 0.06
RNF213Q63HN8 MIR3648-1-201ENST00000615959 180 ntBASIC15.43■□□□□ 0.06
RNF213Q63HN8 AC019069.1-201ENST00000610008 1333 ntBASIC15.42■□□□□ 0.06
RNF213Q63HN8 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC15.42■□□□□ 0.06
RNF213Q63HN8 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC15.41■□□□□ 0.06
RNF213Q63HN8 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC15.41■□□□□ 0.06
RNF213Q63HN8 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC15.41■□□□□ 0.06
RNF213Q63HN8 AL133380.1-201ENST00000506013 324 ntBASIC15.4■□□□□ 0.06
RNF213Q63HN8 AC016575.1-201ENST00000607026 382 ntBASIC15.4■□□□□ 0.06
RNF213Q63HN8 CHML-205ENST00000638160 705 ntTSL 3 BASIC15.4■□□□□ 0.06
RNF213Q63HN8 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF213Q63HN8 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RNF213Q63HN8 RARRES2P2-201ENST00000394842 485 ntBASIC15.4■□□□□ 0.06
RNF213Q63HN8 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
RNF213Q63HN8 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF213Q63HN8 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC15.4■□□□□ 0.06
RNF213Q63HN8 RNF166-209ENST00000567844 633 ntTSL 5 BASIC15.39■□□□□ 0.05
RNF213Q63HN8 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RNF213Q63HN8 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RNF213Q63HN8 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RNF213Q63HN8 BOD1-206ENST00000480951 814 ntTSL 2 BASIC15.38■□□□□ 0.05
RNF213Q63HN8 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
RNF213Q63HN8 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RNF213Q63HN8 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC15.38■□□□□ 0.05
RNF213Q63HN8 AC145285.7-201ENST00000614819 1539 ntBASIC15.37■□□□□ 0.05
RNF213Q63HN8 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
RNF213Q63HN8 CR559946.2-201ENST00000623684 991 ntBASIC15.36■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms