Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC33.12■■■□□ 2.89
PDS5AQ29RF7 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC33.11■■■□□ 2.89
PDS5AQ29RF7 MIR762-201ENST00000390236 83 ntBASIC33.11■■■□□ 2.89
PDS5AQ29RF7 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC33.1■■■□□ 2.89
PDS5AQ29RF7 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC33.09■■■□□ 2.89
PDS5AQ29RF7 MIR3665-201ENST00000578708 105 ntBASIC33.09■■■□□ 2.89
PDS5AQ29RF7 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC33.08■■■□□ 2.89
PDS5AQ29RF7 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC33.08■■■□□ 2.89
PDS5AQ29RF7 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC33.06■■■□□ 2.88
PDS5AQ29RF7 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
PDS5AQ29RF7 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
PDS5AQ29RF7 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC33.03■■■□□ 2.88
PDS5AQ29RF7 DUX4L28-201ENST00000623687 678 ntBASIC33.03■■■□□ 2.88
PDS5AQ29RF7 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
PDS5AQ29RF7 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
PDS5AQ29RF7 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC33.01■■■□□ 2.88
PDS5AQ29RF7 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC33.01■■■□□ 2.87
PDS5AQ29RF7 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC32.99■■■□□ 2.87
PDS5AQ29RF7 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
PDS5AQ29RF7 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC32.98■■■□□ 2.87
PDS5AQ29RF7 AC005559.1-201ENST00000589661 871 ntBASIC32.98■■■□□ 2.87
PDS5AQ29RF7 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC32.97■■■□□ 2.87
PDS5AQ29RF7 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC32.96■■■□□ 2.87
PDS5AQ29RF7 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC32.96■■■□□ 2.87
PDS5AQ29RF7 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC32.95■■■□□ 2.87
PDS5AQ29RF7 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC32.95■■■□□ 2.86
PDS5AQ29RF7 AC087741.3-201ENST00000624270 1347 ntBASIC32.95■■■□□ 2.86
PDS5AQ29RF7 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
PDS5AQ29RF7 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC32.91■■■□□ 2.86
PDS5AQ29RF7 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC32.9■■■□□ 2.86
PDS5AQ29RF7 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
PDS5AQ29RF7 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC32.88■■■□□ 2.85
PDS5AQ29RF7 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC32.87■■■□□ 2.85
PDS5AQ29RF7 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC32.86■■■□□ 2.85
PDS5AQ29RF7 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC32.85■■■□□ 2.85
PDS5AQ29RF7 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC32.85■■■□□ 2.85
PDS5AQ29RF7 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC32.85■■■□□ 2.85
PDS5AQ29RF7 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC32.85■■■□□ 2.85
PDS5AQ29RF7 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC32.85■■■□□ 2.85
PDS5AQ29RF7 AC120057.4-201ENST00000624722 1615 ntBASIC32.84■■■□□ 2.85
PDS5AQ29RF7 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC32.83■■■□□ 2.85
PDS5AQ29RF7 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC32.81■■■□□ 2.84
PDS5AQ29RF7 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
PDS5AQ29RF7 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
PDS5AQ29RF7 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC32.8■■■□□ 2.84
PDS5AQ29RF7 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC32.79■■■□□ 2.84
PDS5AQ29RF7 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC32.79■■■□□ 2.84
PDS5AQ29RF7 AC044849.2-201ENST00000606596 710 ntBASIC32.78■■■□□ 2.84
PDS5AQ29RF7 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
PDS5AQ29RF7 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC32.77■■■□□ 2.84
PDS5AQ29RF7 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
PDS5AQ29RF7 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC32.75■■■□□ 2.83
PDS5AQ29RF7 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC32.74■■■□□ 2.83
PDS5AQ29RF7 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC32.73■■■□□ 2.83
PDS5AQ29RF7 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC32.73■■■□□ 2.83
PDS5AQ29RF7 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC32.73■■■□□ 2.83
PDS5AQ29RF7 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC32.73■■■□□ 2.83
PDS5AQ29RF7 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
PDS5AQ29RF7 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC32.71■■■□□ 2.83
PDS5AQ29RF7 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC32.7■■■□□ 2.82
PDS5AQ29RF7 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC32.69■■■□□ 2.82
PDS5AQ29RF7 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC32.69■■■□□ 2.82
PDS5AQ29RF7 RPS2-209ENST00000529806 993 ntTSL 3 BASIC32.69■■■□□ 2.82
PDS5AQ29RF7 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC32.68■■■□□ 2.82
PDS5AQ29RF7 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC32.67■■■□□ 2.82
PDS5AQ29RF7 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
PDS5AQ29RF7 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
PDS5AQ29RF7 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC32.66■■■□□ 2.82
PDS5AQ29RF7 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC32.66■■■□□ 2.82
PDS5AQ29RF7 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC32.66■■■□□ 2.82
PDS5AQ29RF7 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC32.66■■■□□ 2.82
PDS5AQ29RF7 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC32.65■■■□□ 2.82
PDS5AQ29RF7 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
PDS5AQ29RF7 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
PDS5AQ29RF7 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
PDS5AQ29RF7 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
PDS5AQ29RF7 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
PDS5AQ29RF7 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC32.62■■■□□ 2.81
PDS5AQ29RF7 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
PDS5AQ29RF7 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC32.61■■■□□ 2.81
PDS5AQ29RF7 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
PDS5AQ29RF7 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC32.6■■■□□ 2.81
PDS5AQ29RF7 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC32.59■■■□□ 2.81
PDS5AQ29RF7 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC32.59■■■□□ 2.81
PDS5AQ29RF7 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
PDS5AQ29RF7 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC32.57■■■□□ 2.8
PDS5AQ29RF7 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC32.56■■■□□ 2.8
PDS5AQ29RF7 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC32.56■■■□□ 2.8
PDS5AQ29RF7 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
PDS5AQ29RF7 MLEC-202ENST00000412616 841 ntTSL 3 BASIC32.55■■■□□ 2.8
PDS5AQ29RF7 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC32.55■■■□□ 2.8
PDS5AQ29RF7 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC32.55■■■□□ 2.8
PDS5AQ29RF7 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC32.54■■■□□ 2.8
PDS5AQ29RF7 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
PDS5AQ29RF7 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
PDS5AQ29RF7 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
PDS5AQ29RF7 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.8
PDS5AQ29RF7 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC32.51■■■□□ 2.8
PDS5AQ29RF7 BOD1-206ENST00000480951 814 ntTSL 2 BASIC32.51■■■□□ 2.8
PDS5AQ29RF7 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms