Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 AC139426.1-201ENST00000568218 2529 ntBASIC23.42■■□□□ 1.34
SEC61A1P61619 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
SEC61A1P61619 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC23.42■■□□□ 1.34
SEC61A1P61619 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC23.41■■□□□ 1.34
SEC61A1P61619 ABCB10P3-201ENST00000561950 2166 ntBASIC23.41■■□□□ 1.34
SEC61A1P61619 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
SEC61A1P61619 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
SEC61A1P61619 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
SEC61A1P61619 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC23.4■■□□□ 1.34
SEC61A1P61619 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC23.4■■□□□ 1.34
SEC61A1P61619 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
SEC61A1P61619 SHF-206ENST00000560471 2499 ntTSL 5 BASIC23.39■■□□□ 1.33
SEC61A1P61619 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC23.39■■□□□ 1.33
SEC61A1P61619 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC23.38■■□□□ 1.33
SEC61A1P61619 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
SEC61A1P61619 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
SEC61A1P61619 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC23.38■■□□□ 1.33
SEC61A1P61619 KLF16-203ENST00000592313 508 ntTSL 3 BASIC23.37■■□□□ 1.33
SEC61A1P61619 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
SEC61A1P61619 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC23.36■■□□□ 1.33
SEC61A1P61619 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC23.36■■□□□ 1.33
SEC61A1P61619 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
SEC61A1P61619 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC23.36■■□□□ 1.33
SEC61A1P61619 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SEC61A1P61619 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
SEC61A1P61619 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC23.35■■□□□ 1.33
SEC61A1P61619 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC23.34■■□□□ 1.33
SEC61A1P61619 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SEC61A1P61619 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
SEC61A1P61619 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC23.33■■□□□ 1.33
SEC61A1P61619 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC23.32■■□□□ 1.32
SEC61A1P61619 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC23.32■■□□□ 1.32
SEC61A1P61619 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC23.31■■□□□ 1.32
SEC61A1P61619 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SEC61A1P61619 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC23.3■■□□□ 1.32
SEC61A1P61619 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC23.3■■□□□ 1.32
SEC61A1P61619 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC23.3■■□□□ 1.32
SEC61A1P61619 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
SEC61A1P61619 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
SEC61A1P61619 SETD8P1-201ENST00000623146 1180 ntBASIC23.29■■□□□ 1.32
SEC61A1P61619 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
SEC61A1P61619 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
SEC61A1P61619 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
SEC61A1P61619 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
SEC61A1P61619 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
SEC61A1P61619 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
SEC61A1P61619 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
SEC61A1P61619 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SEC61A1P61619 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC23.24■■□□□ 1.31
SEC61A1P61619 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
SEC61A1P61619 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SEC61A1P61619 AC097358.2-201ENST00000607541 1159 ntBASIC23.21■■□□□ 1.31
SEC61A1P61619 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SEC61A1P61619 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC23.2■■□□□ 1.3
SEC61A1P61619 AC136428.2-201ENST00000563187 214 ntBASIC23.2■■□□□ 1.3
SEC61A1P61619 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SEC61A1P61619 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SEC61A1P61619 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC23.18■■□□□ 1.3
SEC61A1P61619 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC23.17■■□□□ 1.3
SEC61A1P61619 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC23.17■■□□□ 1.3
SEC61A1P61619 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SEC61A1P61619 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC23.14■■□□□ 1.29
SEC61A1P61619 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC23.14■■□□□ 1.29
SEC61A1P61619 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC23.14■■□□□ 1.29
SEC61A1P61619 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
SEC61A1P61619 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
SEC61A1P61619 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SEC61A1P61619 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SEC61A1P61619 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC23.12■■□□□ 1.29
SEC61A1P61619 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
SEC61A1P61619 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
SEC61A1P61619 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC23.12■■□□□ 1.29
SEC61A1P61619 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
SEC61A1P61619 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC23.11■■□□□ 1.29
SEC61A1P61619 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
SEC61A1P61619 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC23.11■■□□□ 1.29
SEC61A1P61619 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC23.11■■□□□ 1.29
SEC61A1P61619 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
SEC61A1P61619 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SEC61A1P61619 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SEC61A1P61619 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
SEC61A1P61619 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SEC61A1P61619 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.29
SEC61A1P61619 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC23.08■■□□□ 1.29
SEC61A1P61619 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC23.08■■□□□ 1.29
SEC61A1P61619 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SEC61A1P61619 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC23.08■■□□□ 1.29
SEC61A1P61619 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC23.08■■□□□ 1.29
SEC61A1P61619 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
SEC61A1P61619 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SEC61A1P61619 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SEC61A1P61619 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC23.06■■□□□ 1.28
SEC61A1P61619 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
SEC61A1P61619 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SEC61A1P61619 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
SEC61A1P61619 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SEC61A1P61619 AL133380.1-201ENST00000506013 324 ntBASIC23.04■■□□□ 1.28
SEC61A1P61619 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
SEC61A1P61619 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
SEC61A1P61619 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms