Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
RETP07949 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
RETP07949 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
RETP07949 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
RETP07949 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.01
RETP07949 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC27.63■■■□□ 2.01
RETP07949 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
RETP07949 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
RETP07949 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC27.6■■■□□ 2.01
RETP07949 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
RETP07949 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
RETP07949 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC27.57■■■□□ 2
RETP07949 HGH1-207ENST00000628266 258 ntTSL 5 BASIC27.57■■■□□ 2
RETP07949 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
RETP07949 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC27.55■■■□□ 2
RETP07949 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC27.55■■■□□ 2
RETP07949 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC27.54■■■□□ 2
RETP07949 DENR-202ENST00000455982 1052 ntTSL 5 BASIC27.53■■■□□ 2
RETP07949 MIR4449-201ENST00000578365 66 ntBASIC27.53■■■□□ 2
RETP07949 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC27.52■■■□□ 2
RETP07949 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC27.5■■□□□ 1.99
RETP07949 RPS2-202ENST00000526522 924 ntTSL 2 BASIC27.5■■□□□ 1.99
RETP07949 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC27.47■■□□□ 1.99
RETP07949 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC27.47■■□□□ 1.99
RETP07949 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
RETP07949 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC27.46■■□□□ 1.99
RETP07949 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
RETP07949 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC27.44■■□□□ 1.98
RETP07949 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
RETP07949 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC27.43■■□□□ 1.98
RETP07949 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
RETP07949 MIR639-201ENST00000384974 98 ntBASIC27.42■■□□□ 1.98
RETP07949 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC27.41■■□□□ 1.98
RETP07949 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC27.41■■□□□ 1.98
RETP07949 DUX4L29-201ENST00000425409 679 ntBASIC27.41■■□□□ 1.98
RETP07949 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
RETP07949 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC27.4■■□□□ 1.98
RETP07949 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
RETP07949 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC27.39■■□□□ 1.98
RETP07949 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC27.38■■□□□ 1.97
RETP07949 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC27.38■■□□□ 1.97
RETP07949 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC27.37■■□□□ 1.97
RETP07949 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
RETP07949 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC27.36■■□□□ 1.97
RETP07949 MACF1-219ENST00000484793 834 ntTSL 2 BASIC27.36■■□□□ 1.97
RETP07949 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC27.36■■□□□ 1.97
RETP07949 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
RETP07949 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
RETP07949 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
RETP07949 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
RETP07949 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
RETP07949 RPS2-209ENST00000529806 993 ntTSL 3 BASIC27.34■■□□□ 1.97
RETP07949 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
RETP07949 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
RETP07949 CALM3-209ENST00000597743 577 ntTSL 4 BASIC27.29■■□□□ 1.96
RETP07949 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
RETP07949 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC27.28■■□□□ 1.96
RETP07949 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC27.27■■□□□ 1.96
RETP07949 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
RETP07949 HSD17B1P1-201ENST00000590052 955 ntBASIC27.27■■□□□ 1.96
RETP07949 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC27.27■■□□□ 1.96
RETP07949 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
RETP07949 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC27.26■■□□□ 1.95
RETP07949 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC27.25■■□□□ 1.95
RETP07949 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC27.23■■□□□ 1.95
RETP07949 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC27.22■■□□□ 1.95
RETP07949 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
RETP07949 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
RETP07949 AC021231.2-201ENST00000594613 730 ntBASIC27.22■■□□□ 1.95
RETP07949 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
RETP07949 WASH5P-204ENST00000632292 975 ntBASIC27.21■■□□□ 1.95
RETP07949 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
RETP07949 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC27.2■■□□□ 1.94
RETP07949 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
RETP07949 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC27.19■■□□□ 1.94
RETP07949 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC27.19■■□□□ 1.94
RETP07949 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC27.18■■□□□ 1.94
RETP07949 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
RETP07949 MIR3648-2-201ENST00000581792 180 ntBASIC27.18■■□□□ 1.94
RETP07949 MIR3648-1-201ENST00000615959 180 ntBASIC27.18■■□□□ 1.94
RETP07949 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC27.18■■□□□ 1.94
RETP07949 BRD4-212ENST00000630599 726 ntTSL 2 BASIC27.18■■□□□ 1.94
RETP07949 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC27.18■■□□□ 1.94
RETP07949 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC27.17■■□□□ 1.94
RETP07949 RNF166-209ENST00000567844 633 ntTSL 5 BASIC27.17■■□□□ 1.94
RETP07949 AC016575.1-201ENST00000607026 382 ntBASIC27.17■■□□□ 1.94
RETP07949 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
RETP07949 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
RETP07949 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
RETP07949 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC27.15■■□□□ 1.94
RETP07949 GDI1-215ENST00000630693 786 ntTSL 4 BASIC27.15■■□□□ 1.94
RETP07949 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC27.14■■□□□ 1.94
RETP07949 CIB2-204ENST00000557846 934 ntTSL 3 BASIC27.13■■□□□ 1.93
RETP07949 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
RETP07949 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
RETP07949 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
RETP07949 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
RETP07949 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC27.11■■□□□ 1.93
RETP07949 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
RETP07949 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC27.1■■□□□ 1.93
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms