Protein–RNA interactions for Protein: P04198

MYCN, N-myc proto-oncogene protein, humanhuman

Predicted RBP Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MYCNP04198 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC30.95■■■□□ 2.55
MYCNP04198 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
MYCNP04198 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
MYCNP04198 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC30.94■■■□□ 2.54
MYCNP04198 DENR-202ENST00000455982 1052 ntTSL 5 BASIC30.93■■■□□ 2.54
MYCNP04198 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
MYCNP04198 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
MYCNP04198 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC30.9■■■□□ 2.54
MYCNP04198 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC30.89■■■□□ 2.54
MYCNP04198 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC30.88■■■□□ 2.53
MYCNP04198 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
MYCNP04198 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC30.86■■■□□ 2.53
MYCNP04198 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
MYCNP04198 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC30.85■■■□□ 2.53
MYCNP04198 HGH1-207ENST00000628266 258 ntTSL 5 BASIC30.84■■■□□ 2.53
MYCNP04198 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
MYCNP04198 RPS2-209ENST00000529806 993 ntTSL 3 BASIC30.83■■■□□ 2.53
MYCNP04198 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC30.82■■■□□ 2.52
MYCNP04198 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC30.82■■■□□ 2.52
MYCNP04198 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
MYCNP04198 WASH5P-204ENST00000632292 975 ntBASIC30.8■■■□□ 2.52
MYCNP04198 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC30.8■■■□□ 2.52
MYCNP04198 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
MYCNP04198 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
MYCNP04198 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
MYCNP04198 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC30.78■■■□□ 2.52
MYCNP04198 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC30.77■■■□□ 2.52
MYCNP04198 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC30.76■■■□□ 2.51
MYCNP04198 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
MYCNP04198 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC30.75■■■□□ 2.51
MYCNP04198 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
MYCNP04198 DUX4L29-201ENST00000425409 679 ntBASIC30.73■■■□□ 2.51
MYCNP04198 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
MYCNP04198 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC30.72■■■□□ 2.51
MYCNP04198 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC30.72■■■□□ 2.51
MYCNP04198 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
MYCNP04198 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC30.7■■■□□ 2.51
MYCNP04198 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
MYCNP04198 RPS2-202ENST00000526522 924 ntTSL 2 BASIC30.69■■■□□ 2.5
MYCNP04198 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
MYCNP04198 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
MYCNP04198 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC30.68■■■□□ 2.5
MYCNP04198 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
MYCNP04198 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
MYCNP04198 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC30.67■■■□□ 2.5
MYCNP04198 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
MYCNP04198 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
MYCNP04198 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
MYCNP04198 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
MYCNP04198 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC30.64■■■□□ 2.5
MYCNP04198 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
MYCNP04198 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
MYCNP04198 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC30.62■■■□□ 2.49
MYCNP04198 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC30.62■■■□□ 2.49
MYCNP04198 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
MYCNP04198 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC30.61■■■□□ 2.49
MYCNP04198 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
MYCNP04198 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC30.61■■■□□ 2.49
MYCNP04198 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
MYCNP04198 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
MYCNP04198 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC30.59■■■□□ 2.49
MYCNP04198 AC079416.2-201ENST00000625035 1193 ntBASIC30.59■■■□□ 2.49
MYCNP04198 CIB2-204ENST00000557846 934 ntTSL 3 BASIC30.58■■■□□ 2.49
MYCNP04198 AC021231.2-201ENST00000594613 730 ntBASIC30.57■■■□□ 2.48
MYCNP04198 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC30.57■■■□□ 2.48
MYCNP04198 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC30.56■■■□□ 2.48
MYCNP04198 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC30.56■■■□□ 2.48
MYCNP04198 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
MYCNP04198 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC30.51■■■□□ 2.47
MYCNP04198 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
MYCNP04198 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC30.5■■■□□ 2.47
MYCNP04198 MIR4449-201ENST00000578365 66 ntBASIC30.47■■■□□ 2.47
MYCNP04198 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
MYCNP04198 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
MYCNP04198 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC30.44■■■□□ 2.46
MYCNP04198 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC30.44■■■□□ 2.46
MYCNP04198 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
MYCNP04198 MIR639-201ENST00000384974 98 ntBASIC30.43■■■□□ 2.46
MYCNP04198 RNF166-209ENST00000567844 633 ntTSL 5 BASIC30.43■■■□□ 2.46
MYCNP04198 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC30.43■■■□□ 2.46
MYCNP04198 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
MYCNP04198 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
MYCNP04198 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
MYCNP04198 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC30.4■■■□□ 2.46
MYCNP04198 AC016575.1-201ENST00000607026 382 ntBASIC30.4■■■□□ 2.46
MYCNP04198 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC30.39■■■□□ 2.46
MYCNP04198 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
MYCNP04198 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
MYCNP04198 MIR6090-201ENST00000622481 60 ntBASIC30.37■■■□□ 2.45
MYCNP04198 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC30.37■■■□□ 2.45
MYCNP04198 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
MYCNP04198 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
MYCNP04198 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
MYCNP04198 MACF1-219ENST00000484793 834 ntTSL 2 BASIC30.36■■■□□ 2.45
MYCNP04198 AC108673.1-201ENST00000510422 1159 ntBASIC30.36■■■□□ 2.45
MYCNP04198 GDI1-215ENST00000630693 786 ntTSL 4 BASIC30.36■■■□□ 2.45
MYCNP04198 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
MYCNP04198 CALM3-209ENST00000597743 577 ntTSL 4 BASIC30.35■■■□□ 2.45
MYCNP04198 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC30.35■■■□□ 2.45
MYCNP04198 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms