Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC21.14■□□□□ 0.97
PDE6DO43924 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
PDE6DO43924 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PDE6DO43924 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PDE6DO43924 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PDE6DO43924 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PDE6DO43924 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
PDE6DO43924 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
PDE6DO43924 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
PDE6DO43924 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
PDE6DO43924 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
PDE6DO43924 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
PDE6DO43924 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
PDE6DO43924 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
PDE6DO43924 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
PDE6DO43924 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
PDE6DO43924 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PDE6DO43924 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
PDE6DO43924 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC21.05■□□□□ 0.96
PDE6DO43924 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
PDE6DO43924 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC21.03■□□□□ 0.96
PDE6DO43924 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC21.03■□□□□ 0.96
PDE6DO43924 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PDE6DO43924 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PDE6DO43924 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC21.02■□□□□ 0.96
PDE6DO43924 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
PDE6DO43924 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
PDE6DO43924 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
PDE6DO43924 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC21.01■□□□□ 0.95
PDE6DO43924 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
PDE6DO43924 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PDE6DO43924 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PDE6DO43924 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PDE6DO43924 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PDE6DO43924 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
PDE6DO43924 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
PDE6DO43924 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PDE6DO43924 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PDE6DO43924 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PDE6DO43924 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC20.96■□□□□ 0.95
PDE6DO43924 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PDE6DO43924 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PDE6DO43924 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
PDE6DO43924 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PDE6DO43924 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC20.94■□□□□ 0.94
PDE6DO43924 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PDE6DO43924 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PDE6DO43924 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PDE6DO43924 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
PDE6DO43924 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC20.92■□□□□ 0.94
PDE6DO43924 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PDE6DO43924 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PDE6DO43924 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC20.9■□□□□ 0.94
PDE6DO43924 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC20.9■□□□□ 0.94
PDE6DO43924 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
PDE6DO43924 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC20.9■□□□□ 0.94
PDE6DO43924 ST7-AS1-201ENST00000456775 1889 ntBASIC20.9■□□□□ 0.94
PDE6DO43924 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PDE6DO43924 AC142086.6-201ENST00000621154 1765 ntBASIC20.9■□□□□ 0.94
PDE6DO43924 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC20.89■□□□□ 0.94
PDE6DO43924 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
PDE6DO43924 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PDE6DO43924 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC20.88■□□□□ 0.93
PDE6DO43924 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PDE6DO43924 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
PDE6DO43924 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
PDE6DO43924 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC20.87■□□□□ 0.93
PDE6DO43924 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC20.87■□□□□ 0.93
PDE6DO43924 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PDE6DO43924 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
PDE6DO43924 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PDE6DO43924 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
PDE6DO43924 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PDE6DO43924 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PDE6DO43924 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PDE6DO43924 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
PDE6DO43924 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PDE6DO43924 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
PDE6DO43924 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
PDE6DO43924 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PDE6DO43924 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC20.83■□□□□ 0.92
PDE6DO43924 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PDE6DO43924 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PDE6DO43924 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PDE6DO43924 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PDE6DO43924 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PDE6DO43924 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PDE6DO43924 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PDE6DO43924 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC20.79■□□□□ 0.92
PDE6DO43924 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
PDE6DO43924 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PDE6DO43924 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PDE6DO43924 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
PDE6DO43924 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PDE6DO43924 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC20.78■□□□□ 0.92
PDE6DO43924 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
PDE6DO43924 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
PDE6DO43924 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
PDE6DO43924 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
PDE6DO43924 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms