Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 MVK-208ENST00000539696 608 ntTSL 5 BASIC32.88■■■□□ 2.85
FOXN1O15353 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC32.88■■■□□ 2.85
FOXN1O15353 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC32.87■■■□□ 2.85
FOXN1O15353 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
FOXN1O15353 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC32.84■■■□□ 2.85
FOXN1O15353 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC32.84■■■□□ 2.85
FOXN1O15353 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC32.82■■■□□ 2.84
FOXN1O15353 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
FOXN1O15353 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC32.81■■■□□ 2.84
FOXN1O15353 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC32.79■■■□□ 2.84
FOXN1O15353 AC145285.7-201ENST00000614819 1539 ntBASIC32.78■■■□□ 2.84
FOXN1O15353 MACF1-219ENST00000484793 834 ntTSL 2 BASIC32.78■■■□□ 2.84
FOXN1O15353 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC32.76■■■□□ 2.83
FOXN1O15353 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC32.75■■■□□ 2.83
FOXN1O15353 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC32.74■■■□□ 2.83
FOXN1O15353 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC32.73■■■□□ 2.83
FOXN1O15353 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC32.71■■■□□ 2.83
FOXN1O15353 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC32.7■■■□□ 2.83
FOXN1O15353 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC32.7■■■□□ 2.83
FOXN1O15353 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
FOXN1O15353 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
FOXN1O15353 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
FOXN1O15353 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC32.67■■■□□ 2.82
FOXN1O15353 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
FOXN1O15353 ABHD17AP3-201ENST00000503096 1137 ntBASIC32.66■■■□□ 2.82
FOXN1O15353 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC32.66■■■□□ 2.82
FOXN1O15353 AC016575.1-201ENST00000607026 382 ntBASIC32.65■■■□□ 2.82
FOXN1O15353 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC32.64■■■□□ 2.82
FOXN1O15353 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC32.63■■■□□ 2.81
FOXN1O15353 DUX4L29-201ENST00000425409 679 ntBASIC32.63■■■□□ 2.81
FOXN1O15353 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
FOXN1O15353 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
FOXN1O15353 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
FOXN1O15353 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC32.59■■■□□ 2.81
FOXN1O15353 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
FOXN1O15353 MIR3648-2-201ENST00000581792 180 ntBASIC32.59■■■□□ 2.81
FOXN1O15353 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC32.59■■■□□ 2.81
FOXN1O15353 MIR3648-1-201ENST00000615959 180 ntBASIC32.59■■■□□ 2.81
FOXN1O15353 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC32.58■■■□□ 2.81
FOXN1O15353 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC32.57■■■□□ 2.8
FOXN1O15353 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC32.56■■■□□ 2.8
FOXN1O15353 GDI1-215ENST00000630693 786 ntTSL 4 BASIC32.56■■■□□ 2.8
FOXN1O15353 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC32.55■■■□□ 2.8
FOXN1O15353 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
FOXN1O15353 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC32.53■■■□□ 2.8
FOXN1O15353 RNF166-209ENST00000567844 633 ntTSL 5 BASIC32.53■■■□□ 2.8
FOXN1O15353 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
FOXN1O15353 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC32.52■■■□□ 2.8
FOXN1O15353 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC32.51■■■□□ 2.79
FOXN1O15353 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC32.51■■■□□ 2.79
FOXN1O15353 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC32.49■■■□□ 2.79
FOXN1O15353 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC32.48■■■□□ 2.79
FOXN1O15353 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
FOXN1O15353 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC32.46■■■□□ 2.79
FOXN1O15353 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
FOXN1O15353 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC32.44■■■□□ 2.78
FOXN1O15353 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC32.44■■■□□ 2.78
FOXN1O15353 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC32.44■■■□□ 2.78
FOXN1O15353 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
FOXN1O15353 AC021231.2-201ENST00000594613 730 ntBASIC32.42■■■□□ 2.78
FOXN1O15353 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
FOXN1O15353 DENR-202ENST00000455982 1052 ntTSL 5 BASIC32.4■■■□□ 2.78
FOXN1O15353 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC32.4■■■□□ 2.78
FOXN1O15353 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
FOXN1O15353 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC32.39■■■□□ 2.78
FOXN1O15353 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC32.39■■■□□ 2.78
FOXN1O15353 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
FOXN1O15353 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC32.38■■■□□ 2.77
FOXN1O15353 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
FOXN1O15353 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC32.37■■■□□ 2.77
FOXN1O15353 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC32.37■■■□□ 2.77
FOXN1O15353 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC32.36■■■□□ 2.77
FOXN1O15353 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC32.35■■■□□ 2.77
FOXN1O15353 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC32.34■■■□□ 2.77
FOXN1O15353 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC32.34■■■□□ 2.77
FOXN1O15353 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC32.33■■■□□ 2.77
FOXN1O15353 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC32.32■■■□□ 2.76
FOXN1O15353 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC32.31■■■□□ 2.76
FOXN1O15353 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC32.31■■■□□ 2.76
FOXN1O15353 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
FOXN1O15353 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC32.31■■■□□ 2.76
FOXN1O15353 CR559946.2-201ENST00000623684 991 ntBASIC32.31■■■□□ 2.76
FOXN1O15353 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC32.31■■■□□ 2.76
FOXN1O15353 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC32.3■■■□□ 2.76
FOXN1O15353 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
FOXN1O15353 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
FOXN1O15353 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC32.29■■■□□ 2.76
FOXN1O15353 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC32.27■■■□□ 2.76
FOXN1O15353 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC32.27■■■□□ 2.76
FOXN1O15353 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC32.26■■■□□ 2.76
FOXN1O15353 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC32.26■■■□□ 2.75
FOXN1O15353 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
FOXN1O15353 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC32.25■■■□□ 2.75
FOXN1O15353 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
FOXN1O15353 RPS2-209ENST00000529806 993 ntTSL 3 BASIC32.24■■■□□ 2.75
FOXN1O15353 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC32.24■■■□□ 2.75
FOXN1O15353 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC32.24■■■□□ 2.75
FOXN1O15353 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC32.23■■■□□ 2.75
FOXN1O15353 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC32.23■■■□□ 2.75
FOXN1O15353 AGPS-202ENST00000409888 815 ntTSL 4 BASIC32.21■■■□□ 2.75
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms