Protein–RNA interactions for Protein: A6NFA1

TRABD2B, Metalloprotease TIKI2, humanhuman

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRABD2BA6NFA1 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
TRABD2BA6NFA1 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC26.39■■□□□ 1.82
TRABD2BA6NFA1 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
TRABD2BA6NFA1 RPS2-202ENST00000526522 924 ntTSL 2 BASIC26.38■■□□□ 1.81
TRABD2BA6NFA1 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC26.38■■□□□ 1.81
TRABD2BA6NFA1 DENR-202ENST00000455982 1052 ntTSL 5 BASIC26.37■■□□□ 1.81
TRABD2BA6NFA1 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
TRABD2BA6NFA1 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
TRABD2BA6NFA1 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC26.36■■□□□ 1.81
TRABD2BA6NFA1 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
TRABD2BA6NFA1 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC26.34■■□□□ 1.81
TRABD2BA6NFA1 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC26.34■■□□□ 1.81
TRABD2BA6NFA1 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
TRABD2BA6NFA1 MIR4449-201ENST00000578365 66 ntBASIC26.33■■□□□ 1.81
TRABD2BA6NFA1 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
TRABD2BA6NFA1 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
TRABD2BA6NFA1 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC26.31■■□□□ 1.8
TRABD2BA6NFA1 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
TRABD2BA6NFA1 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC26.3■■□□□ 1.8
TRABD2BA6NFA1 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
TRABD2BA6NFA1 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
TRABD2BA6NFA1 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
TRABD2BA6NFA1 DUX4L29-201ENST00000425409 679 ntBASIC26.28■■□□□ 1.8
TRABD2BA6NFA1 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
TRABD2BA6NFA1 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC26.26■■□□□ 1.79
TRABD2BA6NFA1 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC26.26■■□□□ 1.79
TRABD2BA6NFA1 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
TRABD2BA6NFA1 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC26.25■■□□□ 1.79
TRABD2BA6NFA1 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC26.24■■□□□ 1.79
TRABD2BA6NFA1 MIR639-201ENST00000384974 98 ntBASIC26.24■■□□□ 1.79
TRABD2BA6NFA1 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
TRABD2BA6NFA1 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
TRABD2BA6NFA1 RPS2-209ENST00000529806 993 ntTSL 3 BASIC26.2■■□□□ 1.78
TRABD2BA6NFA1 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
TRABD2BA6NFA1 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC26.19■■□□□ 1.78
TRABD2BA6NFA1 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC26.19■■□□□ 1.78
TRABD2BA6NFA1 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
TRABD2BA6NFA1 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC26.17■■□□□ 1.78
TRABD2BA6NFA1 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
TRABD2BA6NFA1 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC26.16■■□□□ 1.78
TRABD2BA6NFA1 MACF1-219ENST00000484793 834 ntTSL 2 BASIC26.15■■□□□ 1.78
TRABD2BA6NFA1 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC26.15■■□□□ 1.78
TRABD2BA6NFA1 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC26.14■■□□□ 1.78
TRABD2BA6NFA1 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
TRABD2BA6NFA1 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC26.14■■□□□ 1.78
TRABD2BA6NFA1 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
TRABD2BA6NFA1 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
TRABD2BA6NFA1 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC26.12■■□□□ 1.77
TRABD2BA6NFA1 CALM3-209ENST00000597743 577 ntTSL 4 BASIC26.12■■□□□ 1.77
TRABD2BA6NFA1 WASH5P-204ENST00000632292 975 ntBASIC26.12■■□□□ 1.77
TRABD2BA6NFA1 AC021231.2-201ENST00000594613 730 ntBASIC26.11■■□□□ 1.77
TRABD2BA6NFA1 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
TRABD2BA6NFA1 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
TRABD2BA6NFA1 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC26.1■■□□□ 1.77
TRABD2BA6NFA1 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC26.1■■□□□ 1.77
TRABD2BA6NFA1 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC26.09■■□□□ 1.77
TRABD2BA6NFA1 HSD17B1P1-201ENST00000590052 955 ntBASIC26.09■■□□□ 1.77
TRABD2BA6NFA1 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
TRABD2BA6NFA1 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC26.07■■□□□ 1.76
TRABD2BA6NFA1 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC26.06■■□□□ 1.76
TRABD2BA6NFA1 AC016575.1-201ENST00000607026 382 ntBASIC26.06■■□□□ 1.76
TRABD2BA6NFA1 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
TRABD2BA6NFA1 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
TRABD2BA6NFA1 MIR3648-2-201ENST00000581792 180 ntBASIC26.05■■□□□ 1.76
TRABD2BA6NFA1 MIR3648-1-201ENST00000615959 180 ntBASIC26.05■■□□□ 1.76
TRABD2BA6NFA1 RNF166-209ENST00000567844 633 ntTSL 5 BASIC26.04■■□□□ 1.76
TRABD2BA6NFA1 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC26.04■■□□□ 1.76
TRABD2BA6NFA1 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC26.03■■□□□ 1.76
TRABD2BA6NFA1 CIB2-204ENST00000557846 934 ntTSL 3 BASIC26.03■■□□□ 1.76
TRABD2BA6NFA1 BRD4-212ENST00000630599 726 ntTSL 2 BASIC26.03■■□□□ 1.76
TRABD2BA6NFA1 GDI1-215ENST00000630693 786 ntTSL 4 BASIC26.03■■□□□ 1.76
TRABD2BA6NFA1 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC26.02■■□□□ 1.76
TRABD2BA6NFA1 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
TRABD2BA6NFA1 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
TRABD2BA6NFA1 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC26■■□□□ 1.75
TRABD2BA6NFA1 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
TRABD2BA6NFA1 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
TRABD2BA6NFA1 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC25.98■■□□□ 1.75
TRABD2BA6NFA1 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
TRABD2BA6NFA1 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
TRABD2BA6NFA1 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
TRABD2BA6NFA1 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
TRABD2BA6NFA1 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC25.95■■□□□ 1.74
TRABD2BA6NFA1 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC25.95■■□□□ 1.74
TRABD2BA6NFA1 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC25.94■■□□□ 1.74
TRABD2BA6NFA1 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC25.94■■□□□ 1.74
TRABD2BA6NFA1 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
TRABD2BA6NFA1 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC25.92■■□□□ 1.74
TRABD2BA6NFA1 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
TRABD2BA6NFA1 ABHD17AP3-201ENST00000503096 1137 ntBASIC25.89■■□□□ 1.74
TRABD2BA6NFA1 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC25.88■■□□□ 1.73
TRABD2BA6NFA1 AGPS-202ENST00000409888 815 ntTSL 4 BASIC25.88■■□□□ 1.73
TRABD2BA6NFA1 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC25.88■■□□□ 1.73
TRABD2BA6NFA1 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC25.88■■□□□ 1.73
TRABD2BA6NFA1 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
TRABD2BA6NFA1 DUX4L11-201ENST00000611504 1267 ntBASIC25.87■■□□□ 1.73
TRABD2BA6NFA1 DUX4L12-201ENST00000614593 1267 ntBASIC25.87■■□□□ 1.73
TRABD2BA6NFA1 DUX4L14-201ENST00000621227 1267 ntBASIC25.87■■□□□ 1.73
TRABD2BA6NFA1 AC108673.1-201ENST00000510422 1159 ntBASIC25.86■■□□□ 1.73
TRABD2BA6NFA1 CR559946.2-201ENST00000623684 991 ntBASIC25.86■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms