Protein–RNA interactions for Protein: A0A0B4J271

TRAV12-3, T-cell receptor alpha variable 12-3 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3A0A0B4J271 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRAV12-3A0A0B4J271 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TRAV12-3A0A0B4J271 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
TRAV12-3A0A0B4J271 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRAV12-3A0A0B4J271 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRAV12-3A0A0B4J271 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC20.05■□□□□ 0.8
TRAV12-3A0A0B4J271 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
TRAV12-3A0A0B4J271 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TRAV12-3A0A0B4J271 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
TRAV12-3A0A0B4J271 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC20.04■□□□□ 0.8
TRAV12-3A0A0B4J271 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TRAV12-3A0A0B4J271 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC20.04■□□□□ 0.8
TRAV12-3A0A0B4J271 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TRAV12-3A0A0B4J271 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRAV12-3A0A0B4J271 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TRAV12-3A0A0B4J271 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TRAV12-3A0A0B4J271 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRAV12-3A0A0B4J271 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC19.99■□□□□ 0.79
TRAV12-3A0A0B4J271 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRAV12-3A0A0B4J271 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC19.97■□□□□ 0.79
TRAV12-3A0A0B4J271 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRAV12-3A0A0B4J271 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TRAV12-3A0A0B4J271 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TRAV12-3A0A0B4J271 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC19.96■□□□□ 0.79
TRAV12-3A0A0B4J271 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC19.96■□□□□ 0.79
TRAV12-3A0A0B4J271 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TRAV12-3A0A0B4J271 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRAV12-3A0A0B4J271 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TRAV12-3A0A0B4J271 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC19.94■□□□□ 0.78
TRAV12-3A0A0B4J271 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRAV12-3A0A0B4J271 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRAV12-3A0A0B4J271 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRAV12-3A0A0B4J271 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRAV12-3A0A0B4J271 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
TRAV12-3A0A0B4J271 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC19.92■□□□□ 0.78
TRAV12-3A0A0B4J271 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC19.91■□□□□ 0.78
TRAV12-3A0A0B4J271 ABCB10P1-201ENST00000614297 2181 ntBASIC19.9■□□□□ 0.78
TRAV12-3A0A0B4J271 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRAV12-3A0A0B4J271 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC19.89■□□□□ 0.77
TRAV12-3A0A0B4J271 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC19.88■□□□□ 0.77
TRAV12-3A0A0B4J271 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRAV12-3A0A0B4J271 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TRAV12-3A0A0B4J271 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
TRAV12-3A0A0B4J271 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRAV12-3A0A0B4J271 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC19.85■□□□□ 0.77
TRAV12-3A0A0B4J271 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TRAV12-3A0A0B4J271 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
TRAV12-3A0A0B4J271 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRAV12-3A0A0B4J271 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRAV12-3A0A0B4J271 AL161658.1-201ENST00000623641 1967 ntBASIC19.83■□□□□ 0.77
TRAV12-3A0A0B4J271 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRAV12-3A0A0B4J271 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRAV12-3A0A0B4J271 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC19.82■□□□□ 0.76
TRAV12-3A0A0B4J271 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRAV12-3A0A0B4J271 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRAV12-3A0A0B4J271 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRAV12-3A0A0B4J271 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC19.81■□□□□ 0.76
TRAV12-3A0A0B4J271 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRAV12-3A0A0B4J271 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC19.81■□□□□ 0.76
TRAV12-3A0A0B4J271 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRAV12-3A0A0B4J271 KLF16-203ENST00000592313 508 ntTSL 3 BASIC19.8■□□□□ 0.76
TRAV12-3A0A0B4J271 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRAV12-3A0A0B4J271 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
TRAV12-3A0A0B4J271 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TRAV12-3A0A0B4J271 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC19.78■□□□□ 0.76
TRAV12-3A0A0B4J271 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
TRAV12-3A0A0B4J271 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TRAV12-3A0A0B4J271 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRAV12-3A0A0B4J271 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRAV12-3A0A0B4J271 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC19.77■□□□□ 0.76
TRAV12-3A0A0B4J271 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
TRAV12-3A0A0B4J271 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRAV12-3A0A0B4J271 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRAV12-3A0A0B4J271 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRAV12-3A0A0B4J271 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRAV12-3A0A0B4J271 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRAV12-3A0A0B4J271 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRAV12-3A0A0B4J271 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRAV12-3A0A0B4J271 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRAV12-3A0A0B4J271 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC19.74■□□□□ 0.75
TRAV12-3A0A0B4J271 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
TRAV12-3A0A0B4J271 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC19.73■□□□□ 0.75
TRAV12-3A0A0B4J271 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRAV12-3A0A0B4J271 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRAV12-3A0A0B4J271 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
TRAV12-3A0A0B4J271 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRAV12-3A0A0B4J271 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TRAV12-3A0A0B4J271 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRAV12-3A0A0B4J271 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRAV12-3A0A0B4J271 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRAV12-3A0A0B4J271 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
TRAV12-3A0A0B4J271 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRAV12-3A0A0B4J271 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TRAV12-3A0A0B4J271 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TRAV12-3A0A0B4J271 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
TRAV12-3A0A0B4J271 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRAV12-3A0A0B4J271 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRAV12-3A0A0B4J271 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC19.68■□□□□ 0.74
TRAV12-3A0A0B4J271 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRAV12-3A0A0B4J271 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms