Protein–RNA interactions for Protein: A0A0B4J240

TRAV10, T-cell receptor alpha variable 10 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV10A0A0B4J240 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRAV10A0A0B4J240 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC19.18■□□□□ 0.66
TRAV10A0A0B4J240 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC19.17■□□□□ 0.66
TRAV10A0A0B4J240 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRAV10A0A0B4J240 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
TRAV10A0A0B4J240 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
TRAV10A0A0B4J240 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC19.16■□□□□ 0.66
TRAV10A0A0B4J240 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
TRAV10A0A0B4J240 AC044849.2-201ENST00000606596 710 ntBASIC19.16■□□□□ 0.66
TRAV10A0A0B4J240 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRAV10A0A0B4J240 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRAV10A0A0B4J240 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRAV10A0A0B4J240 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TRAV10A0A0B4J240 AC087741.3-201ENST00000624270 1347 ntBASIC19.15■□□□□ 0.66
TRAV10A0A0B4J240 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TRAV10A0A0B4J240 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC19.14■□□□□ 0.66
TRAV10A0A0B4J240 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRAV10A0A0B4J240 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAV10A0A0B4J240 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
TRAV10A0A0B4J240 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC19.13■□□□□ 0.65
TRAV10A0A0B4J240 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
TRAV10A0A0B4J240 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAV10A0A0B4J240 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAV10A0A0B4J240 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV10A0A0B4J240 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV10A0A0B4J240 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC19.11■□□□□ 0.65
TRAV10A0A0B4J240 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRAV10A0A0B4J240 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TRAV10A0A0B4J240 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRAV10A0A0B4J240 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TRAV10A0A0B4J240 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TRAV10A0A0B4J240 RPS2-209ENST00000529806 993 ntTSL 3 BASIC19.1■□□□□ 0.65
TRAV10A0A0B4J240 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TRAV10A0A0B4J240 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRAV10A0A0B4J240 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC19.08■□□□□ 0.64
TRAV10A0A0B4J240 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV10A0A0B4J240 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV10A0A0B4J240 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV10A0A0B4J240 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV10A0A0B4J240 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV10A0A0B4J240 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV10A0A0B4J240 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV10A0A0B4J240 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC19.06■□□□□ 0.64
TRAV10A0A0B4J240 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV10A0A0B4J240 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV10A0A0B4J240 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRAV10A0A0B4J240 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC19.05■□□□□ 0.64
TRAV10A0A0B4J240 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
TRAV10A0A0B4J240 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRAV10A0A0B4J240 MLEC-202ENST00000412616 841 ntTSL 3 BASIC19.04■□□□□ 0.64
TRAV10A0A0B4J240 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRAV10A0A0B4J240 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
TRAV10A0A0B4J240 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRAV10A0A0B4J240 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TRAV10A0A0B4J240 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRAV10A0A0B4J240 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TRAV10A0A0B4J240 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TRAV10A0A0B4J240 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRAV10A0A0B4J240 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TRAV10A0A0B4J240 BOD1-206ENST00000480951 814 ntTSL 2 BASIC19.01■□□□□ 0.63
TRAV10A0A0B4J240 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC19■□□□□ 0.63
TRAV10A0A0B4J240 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRAV10A0A0B4J240 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC19■□□□□ 0.63
TRAV10A0A0B4J240 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
TRAV10A0A0B4J240 ABHD17AP4-201ENST00000411545 909 ntBASIC18.98■□□□□ 0.63
TRAV10A0A0B4J240 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV10A0A0B4J240 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV10A0A0B4J240 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC18.97■□□□□ 0.63
TRAV10A0A0B4J240 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV10A0A0B4J240 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC18.96■□□□□ 0.63
TRAV10A0A0B4J240 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAV10A0A0B4J240 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TRAV10A0A0B4J240 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
TRAV10A0A0B4J240 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC18.94■□□□□ 0.62
TRAV10A0A0B4J240 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC18.93■□□□□ 0.62
TRAV10A0A0B4J240 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC18.93■□□□□ 0.62
TRAV10A0A0B4J240 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV10A0A0B4J240 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC18.92■□□□□ 0.62
TRAV10A0A0B4J240 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC18.92■□□□□ 0.62
TRAV10A0A0B4J240 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC18.92■□□□□ 0.62
TRAV10A0A0B4J240 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRAV10A0A0B4J240 MIR7108-201ENST00000614319 87 ntBASIC18.91■□□□□ 0.62
TRAV10A0A0B4J240 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRAV10A0A0B4J240 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRAV10A0A0B4J240 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV10A0A0B4J240 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV10A0A0B4J240 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV10A0A0B4J240 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC18.9■□□□□ 0.62
TRAV10A0A0B4J240 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
TRAV10A0A0B4J240 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
TRAV10A0A0B4J240 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV10A0A0B4J240 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV10A0A0B4J240 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
TRAV10A0A0B4J240 AC120057.4-201ENST00000624722 1615 ntBASIC18.89■□□□□ 0.62
TRAV10A0A0B4J240 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC18.89■□□□□ 0.61
TRAV10A0A0B4J240 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRAV10A0A0B4J240 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRAV10A0A0B4J240 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC18.88■□□□□ 0.61
TRAV10A0A0B4J240 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC18.87■□□□□ 0.61
TRAV10A0A0B4J240 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 10.5 ms