Protein–RNA interactions for Protein: A0A0A6YYG3

TRBV6-8, T-cell receptor beta variable 6-8 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-8A0A0A6YYG3 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRBV6-8A0A0A6YYG3 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC18.85■□□□□ 0.61
TRBV6-8A0A0A6YYG3 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRBV6-8A0A0A6YYG3 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRBV6-8A0A0A6YYG3 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
TRBV6-8A0A0A6YYG3 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRBV6-8A0A0A6YYG3 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
TRBV6-8A0A0A6YYG3 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC18.83■□□□□ 0.6
TRBV6-8A0A0A6YYG3 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TRBV6-8A0A0A6YYG3 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TRBV6-8A0A0A6YYG3 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC18.82■□□□□ 0.6
TRBV6-8A0A0A6YYG3 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC18.82■□□□□ 0.6
TRBV6-8A0A0A6YYG3 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC18.81■□□□□ 0.6
TRBV6-8A0A0A6YYG3 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
TRBV6-8A0A0A6YYG3 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRBV6-8A0A0A6YYG3 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRBV6-8A0A0A6YYG3 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC18.78■□□□□ 0.6
TRBV6-8A0A0A6YYG3 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC18.78■□□□□ 0.6
TRBV6-8A0A0A6YYG3 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
TRBV6-8A0A0A6YYG3 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC18.77■□□□□ 0.6
TRBV6-8A0A0A6YYG3 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
TRBV6-8A0A0A6YYG3 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TRBV6-8A0A0A6YYG3 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC18.76■□□□□ 0.59
TRBV6-8A0A0A6YYG3 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRBV6-8A0A0A6YYG3 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRBV6-8A0A0A6YYG3 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRBV6-8A0A0A6YYG3 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TRBV6-8A0A0A6YYG3 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRBV6-8A0A0A6YYG3 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRBV6-8A0A0A6YYG3 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRBV6-8A0A0A6YYG3 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TRBV6-8A0A0A6YYG3 ABCB10P1-201ENST00000614297 2181 ntBASIC18.72■□□□□ 0.59
TRBV6-8A0A0A6YYG3 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC18.71■□□□□ 0.59
TRBV6-8A0A0A6YYG3 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRBV6-8A0A0A6YYG3 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC18.71■□□□□ 0.59
TRBV6-8A0A0A6YYG3 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRBV6-8A0A0A6YYG3 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC18.7■□□□□ 0.58
TRBV6-8A0A0A6YYG3 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
TRBV6-8A0A0A6YYG3 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC18.69■□□□□ 0.58
TRBV6-8A0A0A6YYG3 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRBV6-8A0A0A6YYG3 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRBV6-8A0A0A6YYG3 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC18.68■□□□□ 0.58
TRBV6-8A0A0A6YYG3 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRBV6-8A0A0A6YYG3 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
TRBV6-8A0A0A6YYG3 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRBV6-8A0A0A6YYG3 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRBV6-8A0A0A6YYG3 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRBV6-8A0A0A6YYG3 AL161658.1-201ENST00000623641 1967 ntBASIC18.67■□□□□ 0.58
TRBV6-8A0A0A6YYG3 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRBV6-8A0A0A6YYG3 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRBV6-8A0A0A6YYG3 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRBV6-8A0A0A6YYG3 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
TRBV6-8A0A0A6YYG3 KLF16-203ENST00000592313 508 ntTSL 3 BASIC18.66■□□□□ 0.58
TRBV6-8A0A0A6YYG3 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRBV6-8A0A0A6YYG3 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
TRBV6-8A0A0A6YYG3 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRBV6-8A0A0A6YYG3 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRBV6-8A0A0A6YYG3 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRBV6-8A0A0A6YYG3 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC18.64■□□□□ 0.57
TRBV6-8A0A0A6YYG3 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC18.64■□□□□ 0.57
TRBV6-8A0A0A6YYG3 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
TRBV6-8A0A0A6YYG3 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRBV6-8A0A0A6YYG3 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRBV6-8A0A0A6YYG3 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
TRBV6-8A0A0A6YYG3 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TRBV6-8A0A0A6YYG3 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRBV6-8A0A0A6YYG3 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRBV6-8A0A0A6YYG3 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRBV6-8A0A0A6YYG3 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC18.62■□□□□ 0.57
TRBV6-8A0A0A6YYG3 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRBV6-8A0A0A6YYG3 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC18.61■□□□□ 0.57
TRBV6-8A0A0A6YYG3 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TRBV6-8A0A0A6YYG3 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC18.59■□□□□ 0.57
TRBV6-8A0A0A6YYG3 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRBV6-8A0A0A6YYG3 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRBV6-8A0A0A6YYG3 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRBV6-8A0A0A6YYG3 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRBV6-8A0A0A6YYG3 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRBV6-8A0A0A6YYG3 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRBV6-8A0A0A6YYG3 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRBV6-8A0A0A6YYG3 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
TRBV6-8A0A0A6YYG3 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRBV6-8A0A0A6YYG3 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
TRBV6-8A0A0A6YYG3 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRBV6-8A0A0A6YYG3 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC18.57■□□□□ 0.56
TRBV6-8A0A0A6YYG3 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
TRBV6-8A0A0A6YYG3 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRBV6-8A0A0A6YYG3 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC18.55■□□□□ 0.56
TRBV6-8A0A0A6YYG3 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRBV6-8A0A0A6YYG3 AL133380.1-201ENST00000506013 324 ntBASIC18.55■□□□□ 0.56
TRBV6-8A0A0A6YYG3 WASH5P-204ENST00000632292 975 ntBASIC18.55■□□□□ 0.56
TRBV6-8A0A0A6YYG3 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRBV6-8A0A0A6YYG3 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRBV6-8A0A0A6YYG3 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRBV6-8A0A0A6YYG3 ST7-AS1-201ENST00000456775 1889 ntBASIC18.53■□□□□ 0.56
TRBV6-8A0A0A6YYG3 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC18.53■□□□□ 0.56
TRBV6-8A0A0A6YYG3 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRBV6-8A0A0A6YYG3 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRBV6-8A0A0A6YYG3 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRBV6-8A0A0A6YYG3 ABCB10P3-201ENST00000561950 2166 ntBASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 8.6 ms